ID X12819; SV 1; linear; genomic RNA; STD; VRL; 3944 BP. XX AC X12819; XX DT 12-JAN-1989 (Rel. 18, Created) DT 11-APR-2003 (Rel. 75, Last updated, Version 7) XX DE Bluetongue virus gene for capsid protein VP1, genomic RNA XX KW capsid protein VP1. XX OS Bluetongue virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RP 1-3944 RA Marshall J.J.A.; RT ; RL Submitted (09-SEP-1988) to the INSDC. RL Marshall J.J.A., Institute of Virology, Mansfield Rd., Oxford, England. XX RN [2] RP 1-3944 RA Marshall J.J.A., Roy P., Fukusho G.D., Lyon D.; RT "Evidence for genetic relationship between RNA and DNA viruses from the RT sequence homology of a putative polymerase gene of Bluetongue virus with RT that of vaccinia virus"; RL Nucleic Acids Res. 0:0(1988). XX DR MD5; 6da44cfec8057fca890a963e5654d2db. DR EuropePMC; PMC4488075; 26121128. XX FH Key Location/Qualifiers FH FT source 1..3944 FT /organism="Bluetongue virus" FT /segment="L1" FT /serotype="10" FT /mol_type="genomic RNA" FT /db_xref="taxon:40051" FT CDS 12..3920 FT /note="capsid protein VP1" FT /db_xref="GOA:P13840" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR008723" FT /db_xref="UniProtKB/Swiss-Prot:P13840" FT /protein_id="CAA31306.1" FT /translation="MVAITVQGAQLIKRVVERFYPGIAFDINEGACYIYKFSDHIRRIR FT MKHGTKYRRQAEEIMRSISLRKERLYGIPVLDEVEWKYVFDGQTFQSYAFEVYVNSILP FT WSELDPEEEFLRNYRVSRETTEVEKFIEFRAKNEMQIYGDIPIKVWCCFINELSIELNP FT IPLGMQVMADFVNRFNSPFHQGNRDLSNLEDFQVAYTTPLLFEMCCMESILEFNIKMRM FT REEDISALEFGDIKIDPVGLLREFFILCLPHPKKINNVLRAPYSWFVKMWGVGADPIVV FT LQSTAGDDRNSKDVFYDKFRTEPNRYKALFRSSFYNESRRMNEEKILEAVKYSQNLGSH FT DRRLPLFEKMLKMVYTTPFYPHKSSNMILASFLLSIQTITGYGRAWVKNVSTEFDKQLK FT PNPSNLVRDVSDLTREFFKQAYVEAKERREEMVKPEDLYTSMLRLARNTSSGFSTEIYV FT KKRFGPRLRDKDLVKINSRIKALVIFTKGHTVFTDEELHKKYNSVELYQTKGSRDVPIK FT ATRTIYSINLSVLVPQLIVTLPLNEYFSRVGGITRPDYKKIGGKVIVGDLEATGSRVMD FT AADCFRNSADRDIFTIAIDYSEYDTHLTRHNFRTGMLQGIREAMAPYRALRYEGYTLEQ FT IIDFGYGEGRVANTLWNGKRRLFKTTFDAYIRLDESERDKGSFKVPKGVLPVSSVDVAN FT RIAVDKGFDTLIAATDGSDLALIDTHLSGENSTLIANSMHNMAIGTLIQRAVGREQPGI FT LTFLSEQYVGDDTLFYTKLHTTDITVFDKVAASIFDTVAKCGHEASPSKTMMTPYSVEK FT TQTHAKQGCYVPQDRMMIISSERRKDIEDVQGYVRSQVQTMITKVSRGFCHDLAQLILM FT LKTTFIGAWKMKRTIKENAMYRDRKFDSNDEDGFTLIQIRNPLALYVPIGWNGYGAHPA FT ALNIVMTEEMYVDSIMISKLDEIMAPIRRIVHDIPPCWNETQGDKRGLISATKLSFFSK FT MARPAVQAALSDPQIMNLVEELPLGEFSPGRISRTMMHSALLKESSAKALLSSGYRLEY FT QKALNGWIAQVSMRLGEESGVISTSYAKLFDVYFEGELDGAPYMFPDQNLSPQFYIQKM FT MIGPRVSSRVRNSYVDRIDVILRKDVVMRGFITANTILNVIEKLGTNHSVGDLVTVFTL FT MNIETRVAEELAEYMTSEKIRFDALKLLKKGIAGDEFTMSLNVATQDFIDTYLAYPYQL FT TKTEVDAISLYCTQMVMLRAALGLPKKKMKIVVTDDAKKRYKIRLQRFRTHVPKIKVLK FT KLIDPNRMTVRNLENQFV" XX SQ Sequence 3944 BP; 1203 A; 698 C; 983 G; 1060 T; 0 other; gttaaaatgc aatggtcgca atcaccgtgc aaggtgcaca gctcatcaag cgagtggtcg 60 aacgctttta tccagggata gcatttgata taaatgaagg agcatgttat atatataagt 120 tttctgatca tatacgacgt ataaggatga aacatgggac gaaatatcgg cggcaggcgg 180 aagagattat gcgcagtata agtctgagaa aggagcgatt gtatgggata ccagtgttag 240 atgaggttga gtggaaatac gtgtttgacg gccaaacgtt ccaaagttac gcttttgagg 300 tgtacgtgaa ctcaattttg ccgtggagtg aacttgatcc ggaggaggag ttcttacgta 360 attatagagt ttcaagggag acgactgaag tggaaaaatt tatcgaattt cgtgctaaaa 420 acgagatgca aatatacgga gatataccca ttaaagtatg gtgttgtttc atcaacgaac 480 tgagtataga attaaatcca atccctttag ggatgcaagt tatggctgac ttcgtaaacc 540 gtttcaattc gccattccac caggggaata gagatttatc aaatcttgaa gattttcaag 600 tcgcatatac cacgccgctc ttatttgaga tgtgttgcat ggaatcaatt ttagaattca 660 atattaaaat gcgtatgcgt gaagaagaca tctcggcgtt ggaattcggt gatataaaga 720 ttgatccagt tggactattg cgtgagttct ttattctgtg cttaccacac ccaaagaaaa 780 ttaacaacgt tttaagagcg ccatattctt ggtttgtgaa gatgtggggt gtcggagcag 840 atccaatcgt tgtcttacaa tctacggcgg gtgatgatag gaattcaaag gatgtgtttt 900 atgacaagtt tcgaaccgag ccgaatcgat acaaagccct atttcgatcg tcgttttata 960 acgaatcaag acgaatgaat gaggagaaga tcttagaggc ggtgaagtat tcgcaaaatt 1020 taggctcgca cgatcgtagg ctacctcttt ttgaaaaaat gttaaagatg gtttatacta 1080 caccattcta cccgcataag agctcgaaca tgatattagc atctttccta ttaagcattc 1140 aaaccattac tggatatggc agggcgtggg tgaagaacgt gagcaccgag ttcgataaac 1200 agctgaaacc gaacccaagc aatctggttc gagatgtttc ggatttaacg cgggaattct 1260 tcaagcaagc atatgttgaa gcaaaagagc gtagagagga gatggttaaa cccgaggatt 1320 tatacacatc gatgttacga ttagcgagaa atacaagttc gggtttttca accgagattt 1380 acgtaaaaaa gagatttggt ccaagattaa gggataagga tttggttaag atcaattcaa 1440 ggattaaggc tttggttatt ttcactaagg gacatactgt attcactgat gaagaacttc 1500 ataaaaaata taatagcgtt gaactatatc aaactaaagg ctcaagagat gtaccgatca 1560 aggccacaag aacgatatat tcaatcaatc tctcagtgtt ggtaccgcag ttgattgtta 1620 ctttaccttt aaatgaatat ttttctaggg ttggcgggat aactcgtccg gattacaaaa 1680 agatcggagg aaaggtgatt gtcggagatt tagaagctac ggggtcgcgc gtgatggacg 1740 cagctgattg cttccgtaac tctgccgatc gcgacatatt cacaatcgca attgactata 1800 gtgaatacga tacacaccta acgcggcata atttccgaac cggcatgctc caagggatca 1860 gagaggctat ggctccctat cgggctttgc gatatgaagg ttatacgtta gaacaaatca 1920 tagattttgg atatggagag gggagggtag cgaatacgtt gtggaacgga aagcgaagac 1980 tgtttaagac tacatttgac gcgtatatac gattagatga gagcgagcga gacaaaggta 2040 gtttcaaggt ccccaaggga gtgcttccag tatcgagtgt tgacgttgcg aatcgaatcg 2100 cggtggacaa aggattcgac acgcttatcg cggcaacgga tggaagcgat ttggctttga 2160 ttgatacaca cctttccggc gagaattcga ctcttatcgc caattcgatg cacaatatgg 2220 ctattggaac cttgatacaa cgggccgttg ggagggagca gccagggatt cttaccttct 2280 tatcggaaca atacgtgggg gacgatacac tgttttacac aaaactacat actacagata 2340 ttacggtttt cgataaggtg gcggcttcaa tttttgatac cgtggcgaag tgtggacatg 2400 aagcttcacc tagtaaaacg atgatgacgc catactctgt ggaaaaaacg caaacgcatg 2460 caaaacaggg ttgttacgta ccacaggatc gtatgatgat tatctcatca gaaaggagga 2520 aggatatcga agatgtgcag ggatacgtgc gttcgcaagt gcaaacgatg ataacgaaag 2580 tgagtagagg attttgtcac gatttagcgc agctaatatt gatgcttaag actaccttta 2640 ttggagcgtg gaagatgaag cggactatta aggaaaatgc gatgtatcgc gacagaaagt 2700 ttgattcgaa cgatgaggat gggtttacgc taatacagat ccggaatccc ttagcgttat 2760 atgttcctat aggttggaat gggtacggtg cacatccagc agctcttaat atcgttatga 2820 cggaagagat gtatgtagat tcgatcatga tctcaaagct ggatgagatt atggcgccga 2880 taaggaggat tgtgcatgat attccgccat gttggaacga gactcaggga gacaagcgcg 2940 gactgatcag tgcaaccaaa ctgagtttct tttcgaagat ggctaggcca gctgtccaag 3000 ccgctttaag cgatccgcaa ataatgaatc tggtcgaaga actaccgctt ggagagtttt 3060 cacctggacg catttcaaga actatgatgc atagtgctct tctgaaggag tctagcgcta 3120 aggcgttatt atctagtggt tatagactag aatatcagaa ggctttgaac ggttggattg 3180 cgcaagtttc aatgcgtctg ggagaggagt ctggagtaat atcgacatcc tatgcgaaac 3240 tcttcgatgt gtacttcgaa ggtgagttgg acggagcacc ctatatgttt ccagaccaaa 3300 atttgtctcc gcagttctat atacagaaga tgatgattgg cccacgagtt agctcacgag 3360 tgcggaattc ttatgttgat cgaattgatg tgatattaag aaaggatgtc gtaatgcgag 3420 gttttattac tgccaatacg attctgaacg taattgaaaa attagggact aatcactcag 3480 tgggagatct ggttacggtc ttcacgctta tgaatatcga aacacgtgtg gctgaagagt 3540 tagctgaata tatgacttca gagaagatac gattcgatgc gttaaaactt ctaaagaaag 3600 ggatcgctgg cgacgaattc accatgtcgt tgaatgtcgc tacccaggac tttattgaca 3660 cctacctcgc ctatccctat cagttgacga aaacggaagt tgatgccata tcgttgtatt 3720 gcacgcagat ggttatgcta cgtgcggcac tcgggttacc aaaaaagaag atgaaaattg 3780 ttgtaactga tgatgcgaag aaaagataca agatacgttt gcagaggttt agaacgcacg 3840 tacctaagat taaagttctt aagaagttga tcgatccaaa tagaatgaca gttagaaatc 3900 ttgagaacca attcgtttga gagcacgcgc cgcattacac ttac 3944 //