ID X04658; SV 1; linear; genomic DNA; STD; VRL; 7932 BP. XX AC X04658; XX DT 23-JUN-1988 (Rel. 16, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 10) XX DE Carnation etched ring virus (CERV) DNA XX KW overlapping genes; unidentified reading frame. XX OS Carnation etched ring virus OC Viruses; Ortervirales; Caulimoviridae; Caulimovirus. XX RN [1] RP 1-7932 RX PUBMED; 16453731. RA Hull R., Sadler J., Longstaff M.; RT "The sequence of carnation etched ring virus DNA: comparison with RT cauliflower mosaic virus and retroviruses"; RL EMBO J. 5(12):3083-3090(1986). XX RN [2] RP 1-7932 RA Palkovics L., Balazs E.; RT "Simple and Rapid Detection of Carnation Etched Ring Virus by Polymerase RT Chain Reaction"; RL Acta Phytopathol. Entomol. Hung. 31:161-168(1996). XX DR MD5; 60192bf217dab60c87dd78bb3f95a2ae. DR EuropePMC; PMC110913; 11044083. DR EuropePMC; PMC3289790; 21987074. DR EuropePMC; PMC5052798; 27716385. XX CC Data kindly reviewed (8- AUG-1988) by HULL DR. R. XX FH Key Location/Qualifiers FH FT source 1..7932 FT /organism="Carnation etched ring virus" FT /mol_type="genomic DNA" FT /db_xref="taxon:10640" FT CDS 30..989 FT /note="pot. ORF 1 (AA 1-319)" FT /db_xref="GOA:P05396" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/Swiss-Prot:P05396" FT /protein_id="CAA28356.1" FT /translation="MNSSVEKQNSEIPEKENEEFTFQDNSQGFELEFSTNKKTLSKIQK FT ANLSLKTNDAFNISFLKAFSRKNHIYYHVNYKEFSVDICDTHGKNYLPLVTKSEIKKNL FT DKIKDEKVRSTISDIHFGAIKVLIKARFREGINSPIKMALIDDRITDRQDSILGAAHGN FT LVYGKFMFTVYPKYTTSILDQRLDRTLAFIHHFERNDLMRKGDKVFSITYLVAYALANS FT HHSIDYKEKDAIEIDDVFSEIGSVKSPTFTELDPEPNSWAIDIAQGKQPIGFKPKPTVS FT NNFLRFDKETSPSSSHQKSLEEISDKIDTLVVKLNNIS" FT CDS 986..1492 FT /note="pot. ORF 2 (AA 1-168)" FT /db_xref="GOA:P05397" FT /db_xref="InterPro:IPR004917" FT /db_xref="UniProtKB/Swiss-Prot:P05397" FT /protein_id="CAA28357.1" FT /translation="MSLTTYPHIYKKEQILKLKRLNKLSNDRKFFFSSVKGTLPGIISH FT CNNINEILGRCYLGICKLNSFFGLSKDPSDKLSVSKSPSVYTLPSKIFKEGGGNGDNTT FT TQTDILKNAQDQVILSKKIDELQTQVKELSSKIEPEPLTKEDIKKTYETLSRIESGLKG FT IIGIE" FT CDS 1489..1875 FT /note="pot. ORF 3 (AA 1-128)" FT /db_xref="GOA:P05398" FT /db_xref="InterPro:IPR004986" FT /db_xref="UniProtKB/Swiss-Prot:P05398" FT /protein_id="CAA28358.1" FT /translation="MNLATIASEIEVVKTNQKTIESKIDQILAKIGSTPDESSNLESVA FT AKIISDLTKEMKECHCNKEIVEILNKDKAIIPSPEQDSIQKRLSEPQYTFPNFDVGNEG FT MGSSTNPNALKWPPTEKPQPWPPR" FT CDS 1872..3356 FT /note="pot. ORF 4 (AA 1-494)" FT /db_xref="GOA:P05399" FT /db_xref="InterPro:IPR001878" FT /db_xref="InterPro:IPR001988" FT /db_xref="InterPro:IPR036875" FT /db_xref="UniProtKB/Swiss-Prot:P05399" FT /protein_id="CAA28359.1" FT /translation="MNREAILWKNINSIPEEPDLIKSLEVLSMEQNDRERELEHNLILN FT KQISEQIPEWIIPDSLSELSSGIDLNFVLEEQEVNDNNSQPSLEEEVVSESDVESMRSF FT NVAMNRGEVGESSNKRPKREPDLFTSFGKIREDIGDKNPSLNILNLDCVNSPSDRKNKI FT DKWAAELGLVFLTNPEAYTTAPNAARARLAYMEHKSLGIVNRFIKSTQWTQMNGDILLN FT VVSGLYTMFLGEDYTGNQEKTLEQERAKASLRLINLQLCDICSLQSFFCDYESNLYKLP FT QNEYPSLVKQYLAKIPIVGEKASKRFEEEASAATSYSLGFAHKLVNEELAKICELSKKQ FT KKLKRFNKNCCSTFEKPYEYGCKPSYSKKKKYSKKYKPKYTKYKVIRKKKKFSPGKYFK FT PKDKKSEKAKYCPKGKKTCRCWVCNIEGHYANECPNRQTSEKFKLIQIAENYGLEPIEN FT PYEDQQEICLLEQIQLSSSDSELDDTCEESSSEESE" FT CDS 3353..5332 FT /note="pot. ORF 5 (AA 1-659)" FT /db_xref="GOA:P05400" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR000588" FT /db_xref="InterPro:IPR021109" FT /db_xref="InterPro:IPR041373" FT /db_xref="UniProtKB/Swiss-Prot:P05400" FT /protein_id="CAA28360.1" FT /translation="MSLRNRTNPNSIYVKGILKFPGYQTNLDLHCYVDTGSSLCMASKY FT VIPEEYWQTAEKPLNIKIANGKIIQLTKVCSKLPIRLGGERFLIPTLFQQESGIDLLLG FT NNFCQLYSPFIQYTDRIYFHLNKQSVIIGKITKAYQYGVKGFLESMKKKSKVNRPEPIN FT ITSNQHLFLEEGGNHVDEMLYEIQISKFSAIEEMLERVSSENPIDPEKSKQWMTATIEL FT IDPKTVVKVKPMSYSPSDREEFDRQIKELLELKVIKPSKSTHMSPAFLVENEAERRRGK FT KRMVVNYKAMNKATKGDAHNLPNKDELLTLVRGKKIYSSFDCKSGLWQVLLDKESQLLT FT AFTCPQGHYQWNVVPFGLKQAPSIFPKTYANSHSNQYSKYCCVYVDDILVFSNTGRKEH FT YIHVLNILRRCEKLGIILSKKKAQLFKEKINFLGLEIDQGTHCPQNHILEHIHKFPDRI FT EDKKQLQRFLGILTYASDYIPKLASIRKPLQSKLKEDSTWTWNDTDSQYMAKIKKNLKS FT FPKLYHPEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAERNYHSNEKE FT LLAVIRVIKKFSIYLTPSRFLIRTDNKNFTHFVNINLKGDRKQGRLVRWQMWLSQYDFD FT VEHIAGTKNVFADFLQENTLTNYV" FT CDS 5432..6922 FT /note="pot. ORF 6 (AA 1-496)" FT /db_xref="GOA:P05401" FT /db_xref="InterPro:IPR009027" FT /db_xref="InterPro:IPR011320" FT /db_xref="InterPro:IPR037056" FT /db_xref="UniProtKB/Swiss-Prot:P05401" FT /protein_id="CAA28361.1" FT /translation="MERHEQILKEIAFLELRLQSLKLELEFVRSSGSEQKGKIEPFRPN FT SECSATPMQTAIGKESSNPLMAISLPKAEKKHSKASEVPSPHKTVKEFSEIPKDFLRPN FT QGIQIPKKNEDHSSSSSKEEKGIQNPKKDFYVVYNGPYAGIYDHWGTAKKATNKIPGVS FT YKKFKDMLSARTSADIYTNAQFGEKLKYIPGATTSPKSFAEALTTRPSNMKSLGKPKFI FT KIEEDDDVGFNPEFDLKSFLYIYKYGRNLEEEHFLTDRAFTIDKKEISYLNFVNNSDPE FT GILESFKAGLVRFIYPSTNLQELRLLPKVLKSSVQRFRKKCIKDSEKEIFLKIKSTIPC FT WEDYYNGLDDSVSYRPNYLVQIGISKGVNYQPSQKMEAVVLKEQWQGIAEEKAIEFFQA FT IEDILSNEKIFIIYCDDRILIYSSSPKERTKEDLMAILNFQSEVSSCKLLGFHSDKICS FT YLNKKASVGKPYSCPQKGKAVITSGPSFSVEDTLSDTE" XX SQ Sequence 7932 BP; 2937 A; 1442 C; 1442 G; 2111 T; 0 other; tggtatcaga gccatagtgc tcaaaaatca tgaattcctc tgttgaaaaa cagaattctg 60 aaattcctga aaaggaaaat gaagagttta ctttccaaga taactctcaa ggatttgaac 120 tagagttttc taccaacaag aaaactttat caaaaattca aaaagctaat ctcagcttaa 180 aaactaatga tgctttcaac attagtttcc ttaaggcatt cagccgaaaa aatcatatct 240 actaccacgt gaattataaa gaattctctg tagatatatg tgatacgcat ggtaaaaact 300 atttaccatt agtcactaaa tctgaaatca agaagaatct tgataaaata aaggatgaga 360 aagtaaggtc tactatctca gatatccact tcggagctat taaagttctg ataaaagcga 420 gattccgaga agggataaat tctccgataa aaatggcgtt aatcgatgat agaatcaccg 480 accgtcaaga cagtattcta ggagccgcac acggaaacct agtctacggt aaatttatgt 540 tcaccgtcta ccctaagtat accacttcaa tcttagatca aaggttagac agaactctag 600 cgttcatcca tcactttgag cgcaatgatc tcatgagaaa aggagataaa gtctttagca 660 tcacctacct agtagcttat gctttagcaa atagtcatca ctcgatagac tataaagaaa 720 aagacgcaat tgaaatagat gatgtctttt ctgaaatagg atctgttaaa agcccaacct 780 tcaccgagct tgacccagaa cctaattctt gggctataga catagcacaa ggaaaacaac 840 ccatagggtt taaaccaaaa cctacagtta gcaataactt tcttaggttt gataaggaga 900 caagtccatc ttcgtctcat caaaaatcac tagaggaaat tagtgataaa atagatacct 960 tggtagttaa gttaaacaat atatcatgag tttaactacc tatcctcata tctataagaa 1020 agagcaaatt cttaagctta agcggcttaa taagctctca aatgacagaa agttcttctt 1080 tagctctgtt aaaggaactt tacctggcat aataagccac tgcaacaata tcaatgagat 1140 attaggcaga tgttatttag gaatctgtaa gctaaattca ttctttggat taagcaaaga 1200 ccctagtgac aaattaagtg ttagtaaatc accgtcagtt tacaccttgc cttccaaaat 1260 ctttaaggag gggggaggaa atggtgacaa cacaacaaca cagacagata tactgaaaaa 1320 tgctcaagat caggtcatct taagcaaaaa gattgatgaa cttcaaactc aggttaagga 1380 actctctagt aaaatagaac cagaacccct aaccaaagaa gacatcaaga aaacctatga 1440 aaccttatcc aggatagaat ccggcctaaa aggaattata ggaatagaat gaatctggcc 1500 accatcgcgt cagaaatcga ggttgttaaa accaaccaaa agactataga gtctaaaata 1560 gatcaaattc tagctaaaat aggatcaact cctgatgaaa gctcgaatct tgagtcagtt 1620 gcagcaaaaa ttatttcaga tcttactaaa gaaatgaaag aatgccactg caataaagaa 1680 attgttgaaa tcctcaacaa agacaaagct atcattccat ctccggaaca agacagcata 1740 caaaagagat tgagtgaacc tcaatataca tttcctaact ttgacgtcgg aaatgaaggc 1800 atgggatctt caactaatcc caacgcttta aaatggccgc caacagagaa acctcaacca 1860 tggccgccaa gatgaataga gaagctattc tctggaaaaa tatcaacagt atccctgagg 1920 aacctgacct gataaaatca cttgaagttc tatctatgga acaaaatgat agagaaagag 1980 aattagaaca taatctaatc ctcaacaaac aaatcagtga acaaatccca gaatggatta 2040 ttcctgattc tctttctgaa ttatcttcag gaattgatct aaactttgtt ctcgaagagc 2100 aagaagttaa cgacaacaac agtcaacctt cgctagaaga agaagttgtg tcagaaagcg 2160 acgtagaatc tatgagatcc ttcaacgtag ccatgaatcg tggagaagtt ggagaatcat 2220 ctaataaacg tccaaaaaga gaaccagact tgtttacaag ttttggaaaa atcagagaag 2280 acataggtga caaaaatcct agtttaaaca ttctaaactt agattgtgtc aatagtcctt 2340 ctgataggaa aaataagatt gacaaatggg ccgcagaact tggcttagtc tttcttacaa 2400 acccagaagc ctatactaca gctcctaatg cagccagagc tagactagct tacatggaac 2460 ataagagctt aggaatagtc aacaggttta ttaaaagtac ccagtggact caaatgaatg 2520 gagacatcct tttaaatgta gtcagcgggt tatataccat gttcttagga gaagattaca 2580 ctggtaatca agaaaaaacc ctagaacaag aaagggccaa ggctagcctt aggcttatca 2640 atttacaact ttgtgacatt tgctcacttc agtcattttt ctgtgactat gagtcaaatc 2700 tctataagtt accccaaaat gagtacccta gcctagtaaa acaataccta gctaagatac 2760 ccatagttgg agaaaaagcc tcaaaaaggt ttgaggaaga agctagtgca gcaacaagtt 2820 acagtttagg attcgctcat aaactggtta acgaagagct cgcaaaaatc tgtgaattat 2880 caaagaagca gaaaaagtta aaaaggttta acaagaattg ttgttctacc tttgaaaaac 2940 cttatgaata tggatgcaag ccatcttatt ctaagaagaa aaaatactct aaaaagtata 3000 aacctaaata caccaagtac aaggttatta ggaaaaagaa gaaattttca ccaggaaaat 3060 acttcaaacc aaaggataag aaaagcgaaa aggctaagta ctgtcctaaa ggaaagaaaa 3120 catgccgatg ttgggtatgt aatatagaag gtcattatgc aaatgaatgt cctaacagac 3180 aaacgtctga aaaattcaag ctaattcaaa tagctgaaaa ctatggacta gaacccatag 3240 aaaatcccta cgaggatcaa caagaaatct gtcttctaga acagatacaa ctatcaagct 3300 cagatagtga attggatgac acttgtgaag aaagttcatc tgaagaatcg gaatgagtct 3360 tagaaatagg acaaacccca attccattta tgtcaaagga attctcaaat tccctggcta 3420 ccaaaccaac ctcgacctac actgttatgt agacactggc tcaagtttgt gtatggcaag 3480 taagtatgtc ataccagaag aatattggca gactgctgaa aaacctctca atattaagat 3540 cgccaatggt aagatcatac aattgacaaa ggtttgtagc aaactaccaa tacgtttggg 3600 aggagaacga tttctcattc caacattatt ccagcaggaa agcggaatag atttattgct 3660 tggaaacaat ttctgtcagt tatactcacc tttcatccag tatactgatc gaatttactt 3720 tcatcttaac aagcaaagcg ttatcatagg aaagataaca aaagcatacc aatatggtgt 3780 caaaggattc cttgaatcca tgaaaaagaa gtctaaagtt aataggcctg aaccaattaa 3840 cataacttct aatcaacatc tctttttaga agaggggggg aatcatgtag atgaaatgct 3900 atatgaaatc caaattagca aattttcagc cattgaagaa atgctagaaa gagttagttc 3960 tgaaaatcct atagacccag aaaagtctaa gcaatggatg acagcaacca tagaactcat 4020 agatcctaag acagtagtaa aggtcaaacc tatgagctac agtcctagtg atagagaaga 4080 atttgatagg caaatcaaag aacttcttga gcttaaggtc atcaaaccta gcaaatccac 4140 ccatatgtcc ccagccttcc ttgttgaaaa tgaagcagag agacgtagag gaaagaaaag 4200 aatggtcgtc aactacaagg ctatgaataa agccacaaaa ggagacgctc ataatcttcc 4260 aaacaaggat gaattactca cccttgtaag aggaaagaag atttacagct catttgactg 4320 taagtcagga ttgtggcaag ttctgctaga taaagaatcg cagcttttaa ccgcgtttac 4380 ttgtccacaa ggtcattacc aatggaacgt agtacctttc ggtttaaagc aagcaccaag 4440 catctttcca aagacatatg caaacagcca ttccaatcaa tattctaaat attgttgtgt 4500 ctatgtagat gacatcctag tgtttagtaa cacaggaagg aaggaacatt acattcatgt 4560 tcttaacatt ttgagaagat gtgaaaaact tggaataata ctctccaaga agaaagcaca 4620 actcttcaaa gaaaagatta atttcttagg attagaaatt gatcaaggaa cccattgtcc 4680 tcaaaaccat atcttagaac atattcataa gttcccagat aggatagaag acaaaaagca 4740 gttgcagaga tttctaggaa ttctcacata cgcatctgat tatattccga agctagcctc 4800 tattaggaaa cccttacaga gtaagcttaa agaagattca acatggactt ggaatgatac 4860 tgattctcag tatatggcta agatcaaaaa gaatcttaag agttttccaa aactctacca 4920 ccctgaacct aacgacaaat tagttatcga aactgatgca tctgaagagt tctggggcgg 4980 aattctaaag gctattcaca atagtcatga gtatatctgt cgatatgctt caggcagttt 5040 caaagccgcc gaaagaaatt accatagcaa cgagaaagag cttctcgcag ttatcagagt 5100 aattaaaaaa ttcagtattt atctaacccc ttcgaggttt ttgattcgta ctgataataa 5160 aaacttcacc cattttgtta atataaactt aaaaggtgat agaaaacaag gtcggctggt 5220 acgatggcaa atgtggttat ctcaatatga ttttgatgta gaacatattg caggtacaaa 5280 gaatgtcttt gcagattttc tacaagagaa tactctaact aattatgttt agcgttgcag 5340 gacattcaga ggcattaaat tgctatattt agagcttaat cgctcaagat aaacttgttt 5400 atcaggcttg tttagcctca caggtacaat catggaacgt catgaacaga tactaaaaga 5460 aatagctttc ttagagctaa gacttcagtc cctaaaactg gagttagaat ttgtaagatc 5520 ctctggatct gaacaaaaag gaaagatcga acctttccgc ccaaacagcg aatgttcggc 5580 tactccgatg caaacggcaa tcggtaaaga gtcatcaaat ccgttgatgg ctatcagctt 5640 gccaaaagct gaaaagaagc attctaaggc ttcagaggtt cccagtcctc acaaaactgt 5700 taaggaattt tctgaaattc caaaggactt tttacgtcct aaccagggta ttcaaatccc 5760 taaaaagaat gaagatcact cttcatcttc ttcgaaagaa gaaaagggaa ttcaaaatcc 5820 caaaaaagac ttttatgttg tctacaatgg tccttatgca ggtatctatg atcattgggg 5880 aacagctaaa aaagcaacaa ataagatacc gggagtatct tataaaaaat tcaaagatat 5940 gcttagtgca agaacttcag cagacattta tacaaatgcc cagtttggag aaaaactcaa 6000 gtatatccca ggagcaacta ctagtcctaa gagttttgca gaagcattaa ctaccaggcc 6060 tagtaatatg aagagtttag gaaaacctaa attcataaaa atagaagaag atgatgacgt 6120 tggattcaat ccagaattcg acttaaagag ttttctatat atttacaaat acgggcgaaa 6180 tctggaagaa gaacattttc taacagatcg ggcctttacc attgacaaaa aagaaatctc 6240 gtatcttaac tttgtcaaca atagcgatcc agaaggaatt ttggaaagct ttaaagcagg 6300 attagtaaga tttatttacc caagtactaa tcttcaagaa ctaaggttac tacccaaggt 6360 tcttaaatcc tcggtgcaac gttttcgaaa gaaatgcatt aaggattcag aaaaggaaat 6420 cttccttaaa attaagagta caattccttg ttgggaagac tactacaatg gtcttgatga 6480 ttcggtcagt tatcgtccaa attatctagt acaaattggc atcagcaaag gtgttaacta 6540 tcaaccatct caaaaaatgg aagctgttgt attaaaagaa caatggcaag gcattgcaga 6600 ggaaaaggca attgaattct ttcaagcaat tgaagatatc ctcagcaatg aaaagatttt 6660 tattatctat tgtgatgata gaattctaat ctattcaagt agtccaaaag aaaggactaa 6720 agaagattta atggcaatcc tcaacttcca atcagaagtt agcagctgca agcttttagg 6780 attccatagt gataagatat gttcttatct aaacaaaaaa gcaagcgtcg gcaaaccata 6840 cagctgtcca caaaaaggaa aggctgtaat aacaagcgga cccagcttct cagtggaaga 6900 tactttatca gacactgaat aatggatgga ccctaccacg attaaagagg agcgtctgtc 6960 taaagtaaag tagatgcgtc tttaataatt catctacttt agacgtcatg catgacgttt 7020 aacatgcatt gtatccagat cctccctggc tatataaagg gagttaaatt tcattgttaa 7080 ggcatcgaaa aaaaaatttc aagtctatct ctcaagaaaa acttagaaaa ttactttgtc 7140 ttaagagtca tgtgtaacta acttaagagt ggtgtgagag tcattagtaa gagcaagctc 7200 tatgtgttga gcctaagtcc ttgctctaag tttgtaaaga gttatgtata attatttcat 7260 ataaataaga aatcatacag ttcgctacaa tatctcattg cctgtgaacc tggagtccgt 7320 ataaggtgtt cgtaaaccaa gggtgagtac cgccgaggca ggaggccgta tagggaaaac 7380 aggtgttgga acaatcaaac cttggattgg tcagacagga cagagagtgt ggcaaggtat 7440 tggatactgc ttataatatg aataatttat gcattaactt ttacattctg agctaaggtc 7500 tgaagctaac aatggagttg tgcgtctgaa aatgataact cacatcacat atttaaaaat 7560 atttggtaaa accgaattta aaaagagaaa gtctatgcgt agatttcaag ctaaaccgca 7620 ggttaaataa aaggctttct gcctattatc tagactgtca cttccacagt caagaaaatt 7680 atgagttagc gtgtaatgaa cgcattaact aatatagtct taattgacat gaatatgcag 7740 gagtgctctc actcttgttt atcttctctt aacgagatat ttaaaagaca acgttcacat 7800 tttcatgagc gttgtaaaga cttccgctgt gagaaagaat ttctcatatt aaaaaatgct 7860 gtttccgccg tcgcagctct ttcagagaga tcaaaaattg atctttcaaa tcatcaaggg 7920 accacccgta ac 7932 //