ID X04468; SV 1; linear; genomic RNA; STD; VRL; 7435 BP. XX AC X04468; XX DT 07-JUN-1987 (Rel. 12, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Poliovirus type 3 strain 23127 complete genome XX KW capsid protein; capsid protein VP1; capsid protein vp2; capsid protein vp3; KW capsid protein VP4; polymerase; protease. XX OS Human poliovirus 3 OC Viruses; Riboviria; Picornavirales; Picornaviridae; Enterovirus; OC Enterovirus C. XX RN [1] RP 1-7435 RX PUBMED; 3020156. RA Hughes P.J., Evans D.M.A., Minor P.D., Schild G.C., Almond J.W., RA Stanway G.; RT "The Nucleotide Sequence of a Type 3 Poliovirus Isolated During a Recent RT Outbreak of Poliomyelitis in Finland"; RL J. Gen. Virol. 67:2093-2102(1986). XX DR MD5; c25c81b30505cce7aa6832d0a8bea680. DR EuropePMC; PMC112895; 10482628. DR EuropePMC; PMC121380; 9457433. DR EuropePMC; PMC3696017; 23840537. DR EuropePMC; PMC387693; 15078968. DR RFAM; RF00048; Entero_CRE. DR RFAM; RF00229; IRES_Picorna. DR RFAM; RF00386; Entero_5_CRE. XX CC Data kindly reviewed (11-JUN-1987) by Hughes P.J. XX FH Key Location/Qualifiers FH FT source 1..7435 FT /organism="Human poliovirus 3" FT /strain="23127" FT /mol_type="genomic RNA" FT /db_xref="taxon:12086" FT CDS 747..7367 FT /note="single ORF (AA 1-2206)" FT /db_xref="GOA:P06209" FT /db_xref="InterPro:IPR000081" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR002527" FT /db_xref="InterPro:IPR003138" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR014838" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="InterPro:IPR036203" FT /db_xref="UniProtKB/Swiss-Prot:P06209" FT /protein_id="CAA28155.1" FT /translation="MGAQVSSQKVGAHENSNRAYGGSTINYTTINYYKDSASNAASKQD FT YSQDPSKFTEPLKDVLIKTAPALNSPNVEACGYSDRVLQLTLGNSTITTQEAANSVVAY FT GRWPEFIRDDEANPVDQPTEPDVATSRFYTLDTVMWGKESRGWWWKLPDALRDMGLFGQ FT NMYYHYLGRSGYTVHVQCNASKFHQGSLGVFAIPEFCLAGDSDTQRYTSYANANPGEKG FT GKFYAQFNKDTAVTSPKREFCPVDYLLGCGVLIGNAFVFPHQIINLRTNNSATLVLPYV FT NALSIDSMVKHNNWGIAILPLSPLDFAQDSSVEIPITVTIAPMCSEFNGLRNVTAPKLQ FT GLPVLNTPGSNQYLTSDNHQSPCAIPEFDVTPPIDIPGEVKNVMELAEIDTMIPLNLEN FT TKRNTMDMYRVRLSDSANLSGPILCLSLSPAADPRLSHTMLGEVLNYYTHWAGSLKFTF FT LFCGSMMATGKLLVAYAPPGAQPPTSRKEAMLGTHVIWDLGLQSSCTMVVPWISNVTYR FT QTTQDSFTEGGYISMFYQTRIVVPLSTPKAMDMLGFVSACNDFSVRLLRDTTHISQAAM FT PQGVDDLITEVAQNALALSLPKPQSNLPDTKASGPAHSKEVPTLTAVETGATNPLVPSD FT TVQTRHVIQQRSRSESTIESFFARGACVAIIEVDNEQPATNVQKLFATWRITYKDTVQL FT RRKLEFFTYSRFDMEFTFVVTANFTNSNNGHALNQVYQIMYIPPGAPTPKSWDDYTWQT FT SSNPSIFYTYGAAPARISVPYVGLANAYSHFYDGFAKVPLKSDANDQVGDSLYSAMAVD FT DFGVLAIRVVNDHNPTKVTSKVRVYMKPKHVRVWCPRPPRAVPYYGPGVDYKDGLAPLS FT EKGLTTYGFGHQNKAVYTAGYKICNYHLATQEDLQNAVSVMWNRDLLVTESKAQGIDSI FT ARCNCSTGVYYCESRSRYYPVSFVGPTFQYMEANDYYPARYQSHMLIGHGFASPGDCGG FT ILRCQHGVIGIITAGGEGLVAFSDIRDLYAYEEEAMEQGISSYVESLGAAFGSGFTQQI FT GDKIIELTGMVTSTITEKLLKNLIKIVSSLVIITRNYDDTTTVLATLALLGCDVSPWQW FT LKKKACDILEIPYVMRQGDSWLKKFTEACNAAKGLEWVSNKISKFIDWLREKIIPQARD FT KLEFVTKLKQLEMLENQIATIHQSCPSQEHQEILFNNVRWLSIQSKRFAPLYALEAKRI FT QKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAEKENTSTYSLPPD FT PSHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVSTVEFIPPMASLEEKGILFTSNYVL FT ASTNSSRITPPTVAHSDALARRFAFDMDIQVMSEYSRDGKLNMTMATEMCKNCHQPANF FT KRCCPLVCGKAIQLMDKSSRVRYSIDQITTMIVNEKNRRSNIGNCMEALFQGPLQYKDL FT KIDIKTTPPPECINDLLQAVDSQEVRDYCEKKGWIVNITSQVQTERNINRAMTILQAVT FT TFAAVAGVVYVMYKLFAGHQGAYTGLPNKRPNVPTIRTAKVQGPGFDYAVAMAKRNILT FT ATTSKGEFTMLGVHDNVAILPTHASPGETIVIDGKEIEVLDAKALEDQAGTNLEITIVT FT LKRNEKFRDIRPHIPAQITETNDGVLIVNTSKYPNMYVPVGAVTEQGYLNLGGRQTART FT LMYNFPTRAGQCGGVITCTGKVIGMHVGGNGSHGFAAALKRSYFTQSQGEIQWMRPSKE FT VGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRFKTGFEEAIFSKYVGNKITEV FT DEYMKEAVDHYAGQLMSLDINTEQMCLEDAMYGTDGLEALDLSTSAGYPYVTMGKKKRD FT ILNKQTRDTKEMQRLLDTYGINLPLVTYVKDELRSKTKVEQGKSRLIEASSLNDSVAMR FT MAFGNLYAAFHKNPGVVTGSAVGCDPDLFWSKIPVLMEEKLFAFDYTGYDASLSPAWFE FT ALKMVLEKIGFGDRVDYIDYLNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIR FT TLLLKTYKGIDLDHLKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTMTPADKSATFET FT VTWENVTFLKRFFRADERYPFLIHPVMPMKEIHESIRWTKDPRNTQDHVRSLCLLAWHN FT GEDEYNKFLAMIRSVPIGRALLLPEYSTLYRRWLDSF" FT misc_feature 747..953 FT /note="VP4 (AA 1-69; 69 AA)" FT misc_feature 954..1766 FT /note="VP2 (AA 70-340; 271 AA)" FT misc_feature 1767..2480 FT /note="VP3 (AA 341-578; 238 AA)" FT misc_feature 2481..3380 FT /note="VP1 (AA 579-878; 300 AA)" FT misc_feature 3381..3827 FT /note="P2-A (AA 879-1027; 149 AA)" FT misc_feature 3828..4118 FT /note="P2-B (AA 1028-1124; 97 AA)" FT misc_feature 4119..5105 FT /note="P2-C (AA 1125-1453; 329 AA)" FT misc_feature 5106..5366 FT /note="P3-A (AA 1454-1540; 87 AA)" FT misc_feature 5367..5432 FT /note="VPg (AA 1541-1562; 22 AA)" FT misc_feature 5433..5981 FT /note="protease (AA 1563-1745; 183 AA)" FT misc_feature 5982..7364 FT /note="polymerase (AA 1746-2206; 461 AA)" FT misc_feature 7365..7435 FT /note="3' VT region" FT polyA_site 7435..7435 XX SQ Sequence 7435 BP; 2177 A; 1726 C; 1735 G; 1797 T; 0 other; ttaaaacagc tctggggttg ttcccacccc agaggcccac gtggcggcta gtacactggt 60 atcacggtac ccttgtacgc ctgttttata ctcccttccc cgtaacttag aagtatacaa 120 gccaagttca atagaagggg gtacaaacca gtaccaccac gaacaagcac ttctgtttcc 180 ccggtgaagt tgcatagatt gttcccacgg tcgaaagcga ctgatccgtt acccgctcat 240 gtacttcggg aagcctagta tcacttcgga ctcttcgatg cgttgcgctc agcactcaac 300 cccagagtgt agcttaggtc gatgagtctg gacaaacctc actggcgaca gtggtccagg 360 ctgcgttggc ggcctacctg tggcccaaag ccacaggacg ctagttgtga acaaggtgtg 420 aagagcctac tgagctacat gagagtcctc cggcccctga atgcggctaa tctcaaccac 480 ggagcaggta gtcacaaacc agtgatttgc ctgtcgtaac gcgaaagtct gtggcggaac 540 cgactacttt gggtgtccgt gtttcctttt attctcatta tggctgctta tggtgacaat 600 cctagattgt tatcataaag tgagctggat tggccatccg gtgaaaatca agcacattat 660 atatttgttt gttgggttta accctctgat tgcacgcact cttggcttgg ttaggattat 720 tgtgtggaaa aggcaccata gttacaatgg gtgctcaagt ttcatcccaa aaagttggag 780 cccatgagaa ctcgaatagg gcatatggtg gttctaccat caattacacc actatcaatt 840 attacaagga ttcagcaagc aatgccgcat ctaagcaaga ctattcccag gatccctcta 900 aattcaccga accactgaag gatgtgttaa ttaagacagc accagctctc aactctccaa 960 atgttgaggc atgtggatac agcgataggg tgttgcaatt gaccctaggc aactccacca 1020 taacaacgca agaggcggcc aattcagtgg tcgcgtatgg tcgttggcct gagtttatcc 1080 gagatgacga agcaaatcca gtggaccaac caacagagcc ggacgtagca acttctaggt 1140 tttacacgct ggacacagtc atgtggggca aagagtccag gggatggtgg tggaaattac 1200 cagatgctct cagagacatg gggctgtttg gacaaaatat gtattaccac tacttaggga 1260 gatcaggata tacagtgcac gtccagtgca acgcctctaa atttcatcag ggctcattgg 1320 gagtattcgc cataccagaa ttctgtctgg ctggggacag tgatacgcaa agatacacca 1380 gctacgcgaa cgctaaccca ggtgagaaag gagggaagtt ttatgctcaa tttaataaag 1440 atactgctgt aacctcccca aaaagggaat tttgtccagt agactattta ctaggatgtg 1500 gtgttttgat agggaatgct tttgtgttcc cccaccagat tatcaactta agaaccaaca 1560 acagtgccac cctagtatta ccctatgtaa atgcactgtc tatagattca atggtcaagc 1620 acaataattg gggcattgct attctccccc tgtcaccatt ggattttgca caagactcat 1680 cagtggagat acccattaca gtcacaatag ctccgatgtg cagtgagttc aatggtttgc 1740 gcaacgttac agccccaaag cttcaaggac taccagtgct gaatacacca ggcagcaatc 1800 agtacctaac ttcggacaac caccagtccc catgtgcaat cccagagttt gatgtcacgc 1860 caccaatcga catacctggg gaagtcaaaa atgtgatgga attggctgaa atagacacta 1920 tgattcctct gaatctagag aataccaaga ggaataccat ggacatgtac agagtgaggt 1980 tgagcgacag cgccaacctg agcggtccaa tcttatgcct gtctctgtca ccggcagcag 2040 accctcgctt atcacacact atgttagggg aggttttgaa ctactacaca cactgggctg 2100 gatccctgaa gttcactttc ttattctgtg gctctatgat ggctactgga aagctgttag 2160 tcgcttacgc ccctccggga gcacaaccac cgaccagtcg caaggaggca atgctcggca 2220 cgcatgtcat ttgggacttg ggcctacaat cctcatgtac gatggttgta ccgtggatca 2280 gcaatgtgac atacagacag actacacagg acagttttac tgaaggggga tacatcagca 2340 tgttctatca aaccagaatt gtggttcctt tatcaacccc aaaggcgatg gacatgttgg 2400 ggtttgtttc agcgtgcaac gatttcagtg tacggttgct gcgcgacaca acacacattt 2460 cgcaggcggc catgccacaa ggggtggatg atctgataac cgaagtggca caaaatgctt 2520 tagctctctc acttcccaag ccacaaagca atcttcctga tacaaaggcc agtgggcccg 2580 cccactccaa ggaagttccg acgctgactg cggtagagac cggtgccact aatccacttg 2640 ttccatcaga caccgtgcag acgcgacacg tcatacagca gcgtagcagg tctgagtcaa 2700 ctattgaatc cttctttgca aggggggcgt gtgttgccat tattgaggtg gacaatgaac 2760 agccagccac caatgtccaa aaactgttcg ccacatggcg aatcacctat aaggacacgg 2820 tgcagttgcg ccggaaatta gagttcttca catactcccg ctttgacatg gaatttacct 2880 ttgtggtgac agccaacttc accaactcaa acaacgggca tgctctaaac caggtctacc 2940 agataatgta catcccccca ggtgccccta cgccaaagtc atgggacgat tacacctggc 3000 aaacttcttc aaacccatcc atattctaca cctacggtgc tgccccggcc cggatctccg 3060 taccatacgt gggattagca aacgcatact cgcacttcta tgacggtttt gctaaagtac 3120 cactgaaatc tgatgcaaat gatcaagtgg gggattcact ctacagcgcc atggctgtgg 3180 atgatttcgg tgtcctcgcc ataagagtgg tcaatgatca caaccccact aaagtaacat 3240 caaaggtgcg ggtgtacatg aaacccaagc atgtgagagt gtggtgccca agacccccgc 3300 gggcggtacc gtactacggg ccaggagtgg actacaaaga cgggttggca cctctatcag 3360 agaagggact cacaacgtat gggtttggtc accaaaataa agctgtttac acagcgggtt 3420 ataagatctg caattaccac ctcgctacac aagaagatct acagaatgca gtgagcgtca 3480 tgtggaatag ggatctcctg gtgacagaat caaaagctca gggcatagat tctatcgcca 3540 gatgcaattg cagcactggc gtgtattatt gtgagtccag aagtaggtat taccctgttt 3600 ccttcgttgg tccaactttc caatacatgg aagcaaatga ttactaccca gctcgatacc 3660 agtcccacat gctaatcggt cacggtttcg catcacctgg ggattgtggc ggtatcctca 3720 gatgccagca tggtgtgata ggcatcatca cggctggagg agagggcctg gtggctttct 3780 cagatattag agacctttat gcatatgagg aagaagccat ggagcagggc atttccagct 3840 acgttgagtc ccttggagca gcatttggaa gcgggttcac ccagcaaatc ggggataaaa 3900 ttattgagct aaccggcatg gtcaccagca ctataaccga aaaactattg aagaacttaa 3960 taaagattgt atcctcccta gtcattatca ctaggaatta tgatgacacc accactgttt 4020 tagcaaccct agcgctactt gggtgtgatg tgtctccttg gcagtggctc aaaaagaaag 4080 cttgtgatat actagaaatc ccatacgtca tgcgccaggg tgacagctgg ttgaagaagt 4140 ttacggaagc atgcaacgct gccaaaggac tggaatgggt gtccaacaag atctccaaat 4200 ttattgattg gttgagagag aaaatcattc ctcaagctag ggacaaattg gaatttgtta 4260 ccaagttgaa acagttagag atgttggaga accaaattgc aaccatccac cagtcatgcc 4320 ccagccagga acaccaggag attctgttca acaatgtgag gtggttgtcc attcagtcaa 4380 aaaggttcgc cccactctac gcattagagg caaagagaat acagaagttg gaacacacga 4440 ttaacaatta catacagttc aagagcaaac accgtattga accagtatgt ttgttagtac 4500 atggtagccc cggaactggc aagtcggtag ccaccaacct aatagctagg gctatagcgg 4560 agaaggaaaa cacctccaca tactcattac caccagatcc atctcatttc gacgggtaca 4620 agcaacaggg agtagtgatc atggatgatc taaaccagaa tccagatgga gccgatatga 4680 aattattctg tcaaatggtt tccacagtgg agttcatacc accaatggct tcacttgaag 4740 agaaaggcat tctatttaca tcaaattacg tcctagcctc taccaactct agccgtatca 4800 cgccacccac tgttgcacac agtgacgctt tggccaggcg ttttgcattc gacatggaca 4860 ttcaagtcat gagtgagtac tccagggatg ggaaattaaa catgacaatg gcaacagaaa 4920 tgtgcaagaa ctgtcatcaa ccagcaaact tcaagaggtg ctgtccattg gtatgtggga 4980 aggctattca attaatggac aagtcctcta gggtcaggta cagcattgat cagatcacta 5040 ccatgatagt taatgagaaa aacagaaggt ccaacattgg taactgcatg gaagcactgt 5100 ttcaaggccc tttacaatac aaggatttaa aaattgacat caagaccact cccccgcccg 5160 agtgcataaa cgacttgctc caggccgttg actctcaaga agtgagggac tactgtgaga 5220 aaaagggatg gattgtcaac atcaccagtc aagttcaaac tgagaggaac ataaacagag 5280 caatgactat cttgcaagcc gtcaccacat ttgcagcagt tgctggggtg gtgtatgtga 5340 tgtacaagct gtttgcagga caccaagggg cttatacagg acttccaaac aagagaccca 5400 acgtccctac cattagaaca gctaaggttc agggtccagg gtttgattat gcagtggcca 5460 tggccaagag aaatattctt acagcaacca ccagtaaagg agaattcacg atgcttgggg 5520 tgcacgacaa cgtagctatt ctaccaaccc atgcatcgcc aggtgagacg atagtcattg 5580 atggcaagga aattgaagtg ttagatgcta aagctctaga agatcaggcc ggaactaact 5640 tggaaattac tattgttact cttaagagga atgaaaaatt tagagacatt aggccacaca 5700 ttcccgcaca aatcaccgag acaaatgatg gagtgttgat cgtgaacact agtaagtacc 5760 ccaacatgta tgttcctgta ggtgctgtga ctgaacaggg atatcttaat ctcggtggac 5820 gtcaaactgc tcgtacatta atgtacaact tcccaaccag agcaggccag tgtggtggag 5880 tcatcacatg cactggtaag gtcattggga tgcatgttgg tgggaacggt tcacacgggt 5940 ttgcagcagc cttaaaacgg tcatacttca ctcaaagtca aggagaaatc caatggatga 6000 gaccatcaaa agaggtgggc taccctataa ttaacgcccc atctaagacc aaattggaac 6060 ccagtgcatt ccactacgta tttgaaggtg ttaaggaacc agccgtgctc acaaaaaatg 6120 acccaagatt caaaacgggt tttgaggaag ccattttttc taaatatgtg ggcaacaaga 6180 ttacagaagt ggatgaatat atgaaggaag cagtggatca ttatgctggc cagctcatgt 6240 cattggatat taacactgag caaatgtgcc ttgaggatgc catgtacggt actgatggtt 6300 tggaagcact agatctcagc acaagcgcgg ggtacccata tgttaccatg ggaaagaaaa 6360 agagagacat cctaaacaaa caaactagag atacaaaaga gatgcagaga cttctggaca 6420 catacggaat taaccttccg ctagtcactt atgtgaaaga tgaactaaga tctaagacca 6480 aagtggaaca gggaaaatcc aggctgattg aagcatccag tttaaatgac tctgtggcaa 6540 tgagaatggc gtttggtaac ttatacgctg ctttccacaa aaacccagga gttgtaacag 6600 gctcagcagt tggatgtgat ccagatttgt tttggagtaa aatacccgtc ttaatggaag 6660 aaaaactctt tgcatttgac tacacagggt acgacgcctc gctcagcccg gcctggtttg 6720 aagcactaaa aatggtgttg gaaaagatag gctttggaga cagggtggac tacattgact 6780 acctgaacca ttcacatcat ctttacaaaa acaaaacata ttgtgtcaag ggtggcatgc 6840 catctggctg ctctggcacc tctattttca actcaatgat taacaacttg ataatcagga 6900 cacttttact aaaaacctac aagggcatag acttagatca tctaaagatg attgcctatg 6960 gtgatgatgt aattgcatcc tacccccatg aggttgacgc tagtctccta gcccaatcag 7020 gaaaagacta tggattaacc atgacaccag ctgataagtc agccacattt gaaactgtca 7080 catgggagaa tgtaaccttt ttgaaaagat tcttcagagc agatgagagg tacccattct 7140 tgatccaccc agtaatgcca atgaaggaaa ttcatgaatc aattagatgg accaaagatc 7200 ccagaaacac tcaggatcac gtccgctctc tgtgcctatt ggcttggcac aatggagagg 7260 acgaatacaa taaattttta gctatgatca gaagcgtgcc aattggaagg gctctattgc 7320 tccctgagta ctctacattg taccgccgtt ggctcgactc tttttagcaa ccctacctca 7380 gtcgaattgg attgggtcat actgttgtag gggtaaattt ttctttaatt cggag 7435 //