ID   X03241; SV 1; linear; genomic RNA; STD; VRL; 1799 BP.
XX
AC   X03241;
XX
DT   02-JUL-1986 (Rel. 09, Created)
DT   21-NOV-1993 (Rel. 37, Last updated, Version 4)
XX
DE   Tobacco rattle virus RNA-2 (CAM strain) for capsid protein
XX
KW   capsid protein.
XX
OS   Pepper ringspot virus
OC   Viruses; Riboviria; Virgaviridae; Tobravirus.
XX
RN   [1]
RP   1-1799
RX   DOI; 10.1093/nar/13.23.8507.
RX   PUBMED; 3841203.
RA   Bergh S.T., Koziel M.G., Huang S.-C., Thomas R.A., Gilley D.P., Siegel A.;
RT   "The nucleotide sequence of tobacco rattle virus RNA-2 (CAM strain)";
RL   Nucleic Acids Res. 13(23):8507-8518(1985).
XX
DR   MD5; 525f2a09bd9e68909431abb5704435e6.
XX
CC   Data kindly reviewed (02-MAY-1986) by Siegel A.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1799
FT                   /organism="Pepper ringspot virus"
FT                   /strain="CAM strain"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:31750"
FT   repeat_region   1..119
FT                   /note="imp. direct repeat 1"
FT   repeat_region   119..237
FT                   /note="imp. direct repeat 1"
FT   repeat_region   236..311
FT                   /note="imp. direct repeat 2"
FT   repeat_region   300..310
FT                   /note="imp. direct repeat 2"
FT   repeat_region   312..387
FT                   /note="imp. direct repeat 2"
FT   repeat_region   376..386
FT                   /note="imp. direct repeat 3"
FT   repeat_region   431..441
FT                   /note="imp. direct repeat 3"
FT   CDS             574..1245
FT                   /note="put. capsid protein (aa 1-223)"
FT                   /db_xref="GOA:P05070"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="UniProtKB/Swiss-Prot:P05070"
FT                   /protein_id="CAA26998.1"
FT                   /translation="MAMYDDEFDTKASDLTFSPWVEVENWKDVTTRLRAIKFALQADRD
FT                   KIPGVLSDLKTNCPYSAFKRFPDKSLYSVLSKEAVIAVAQIQSASGFKRRADEKNAVSG
FT                   LVSVTPTQISQSASSSAATPVGLATVKPPRESDSAFQEDTFSYAKFDDASTAFHKALAY
FT                   LEGLSLRPTYRRKFEKDMNVKWGGSGSAPSGAPAGGSSGSAPPTSGSSGSGAAPTPPPN
FT                   P"
FT   misc_feature    1341..1799
FT                   /note="3'-terminus identical to TRV RNA-1"
XX
SQ   Sequence 1799 BP; 463 A; 329 C; 423 G; 584 T; 0 other;
     aaaattttca gaatgtcttc gggggacccc gctgacttct ggcgtgttga ggatggatga        60
     cttgagctta acttcaacat gtttatccag tttctaggcc gtttttccta gaagttttaa       120
     aattttcaga atgtcttcgg gggaccccgc tgacttctgg cgtcttgagg atggatgact       180
     tgagcttaac ttcaacatgt ttatccggtt tctaggccgg ttttcctaga agttttagag       240
     ttagatttgt acatatttta ctttgaaaac aaggaacgtg aggtatggcc tgccgaacgc       300
     tctggttaaa atagagttag atttgtacat attttacttt gaaaacaagg aacgtgaggt       360
     gtggcttgcc gaacgctctg gttaaaaaat gcccgtctta tcggagcgca tgtgaaatca       420
     accacgattt ctctggttca acaagtttct tgttgtaagc catcacactt ttgtgtaatg       480
     gatgcataat tatactgatt gtgcgatttt aaatatcatt attataagat tttgccttgc       540
     tgatccaccg gttgctgcaa tcacctgcgc aaaatggcaa tgtacgacga cgaattcgat       600
     acgaaagctt ctgaccttac cttctctccg tgggtcgagg ttgagaattg gaaagatgtt       660
     actactaggt tgagagcgat taagttcgcg ttgcaagctg acagagacaa aattcccggg       720
     gtgcttagtg atttgaaaac gaattgtcct tattcggcct tcaagaggtt tcctgataaa       780
     agtttgtact cagttctctc taaggaggct gtgattgccg tagctcagat tcaatctgct       840
     tctggtttta aaagacgcgc agacgagaag aatgctgttt ctggtctggt ttcagttacg       900
     ccgacgcaaa tttcgcaatc tgcgtcttct tctgcagcga ctccagtcgg tttagctact       960
     gtgaaaccgc ctcgcgagag tgacagtgct tttcaggaag acactttttc ttatgctaag      1020
     tttgatgatg cgtccactgc cttccacaaa gctcttgctt atttggaagg tttaagtctg      1080
     agaccaactt accgtaggaa gtttgagaag gacatgaacg tgaaatgggg gggttctggt      1140
     tctgccccaa gtggagctcc agcgggaggt tcttccggct cagctcctcc aacttctgga      1200
     agttctgggt ccggtgcggc tcccacacct ccacctaatc cttgatttga atcgatttaa      1260
     gagttgtctg ctttacggac agggggaacc gctccatacg gtttagtgtg aaaagaagca      1320
     cttacaaaaa ttctttttat cttctgttgt ggcatgaagc atttacaaaa gtgcaaaacc      1380
     gataatcctt taaaggagaa acggttgaac acaccaaaaa gactgtttag agatgatgta      1440
     gattttggtc ttaatttact gtttagtgag gtgtgttgat agtagttagt taaatgttta      1500
     attaatgtgc tattttagtt aacgttataa tatttagtag tatagtgtta tgttattatg      1560
     tttgttttat ttgtgtatga gctaggtatg ggtgtatgcc ctgcttaagt ggttctacca      1620
     taggagtaaa aacagtgtgt ttatttatta ttttagtgtt tataaaaatc caaaaagatt      1680
     ttcgtaggtt ttaggtttcg gcatttggcc ggggttcgaa taacattaaa gtggataagt      1740
     ttgatgctgg cgaacaaagg gtgaaaaacc cttcgtcaac cgtgaacgtt atcacgccc       1799
//