ID X02380; SV 1; linear; unassigned RNA; STD; VRL; 3234 BP. XX AC X02380; K02706; XX DT 28-JAN-1986 (Rel. 08, Created) DT 29-OCT-1996 (Rel. 49, Last updated, Version 4) XX DE Brome mosaic virus (BMV) RNA1 sequence XX KW . XX OS Brome mosaic virus OC Viruses; Riboviria; Bromoviridae; Bromovirus. XX RN [1] RP 1-3234 RX DOI; 10.1016/S0022-2836(84)80012-1. RX PUBMED; 6694215. RA Ahlquist P.G., Dasgupta R., Kaesberg P.; RT "Nucleotide sequence of the brome mosaic virus genome and its implications RT for viral replication"; RL J. Mol. Biol. 172(4):369-383(1984). XX DR MD5; c0fbf6061de25e4b9d17f736182730af. DR EuropePMC; PMC3318653; 22318148. DR RFAM; RF01084; TLS-PK3. XX CC Data kindly reviewed (07-MAR-1986) by P. Ahlquist XX FH Key Location/Qualifiers FH FT source 1..3234 FT /organism="Brome mosaic virus" FT /mol_type="unassigned RNA" FT /db_xref="taxon:12302" FT misc_feature 1..42 FT /note="region of 96% homology to BMV RNA2" FT misc_RNA 1..1 FT /note="pot. cap site" FT CDS 75..2960 FT /note="RNA1 translation product aa 1-961" FT /db_xref="GOA:P03588" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:P03588" FT /protein_id="CAA26228.1" FT /translation="MSSSIDLLKLIAEKGADSQSAQDIVDNQVAQQLSAQIEYAKRSKK FT INVRNKLSIEEADAFRDRYGGAFDLNLTQQYHAPHSLAGALRVAEHYDCLDSFPPEDPV FT IDFGGSWWHHFSRRDKRVHSCCPVLGVRDAARHEERMCRMRKILQESDDFDEVPNFCLN FT RAQDCDVQADWAICIHGGYDMGFQGLCDAMHSHGVRVLRGTVMFDGAMLFDREGFLPLL FT KCHWQRDGSGADEVIKFDFENESTLSYIHGWQDLGSFFTESVHCIDGTTYLLEREMLKC FT NIMTYKIIATNLRCPRETLRHCVWFEDISKYVGVSIPEDWSLNRWKCVRVAKTTVREVE FT EIAFRCFKESKEWTENMKAVASILSAKSSTVIINGQAIMAGERLDIEDYHLVAFALTLN FT LYQKYEKLTALRDGMEWKGWCHHFKTRFWWGGDSSRAKVGWLRTLASRFPLLRLDSYAD FT SFKFLTRLSNVEEFEQDSVPISRLRTFWTEEDLFDRLEHEVQTAKTKRSKKKAKVPPAA FT EIPQEEFHDAPESSSPESVSDDVKPVTDVVPDAEVSVEVPTDPRGISRHGAMKEFVRYC FT KRLHNNSESNLRHLWDISGGRGSEIANKSIFETYHRIDDMVNVHLANGNWLYPKKYDYT FT VGYNEHGLGPKHADETYIVDKTCACSNLRDIAEASAKVSVPTCDISMVDGVAGCGKTTA FT IKDAFRMGEDLIVTANRKSAEDVRMALFPDTYNSKVALDVVRTADSAIMHGVPSCHRLL FT VDEAGLLHYGQLLVVAALSKCSQVLAFGDTEQISFKSRDAGFKLLHGNLQYDRRDVVHK FT TYRCPQDVIAAVNLLKRKCGNRDTKYQSWTSESKVSRSLTKRRITSGLQVTIDPNRTYL FT TMTQADKAALQTRAKDFPVSKDWIDGHIKTVHEAQGISVDNVTLVRLKSTKCDLFKHEE FT YCLVALTRHKKSFEYCFNGELAGDLIFNCVK" FT misc_feature 3042..3234 FT /note="193 bp region of common secondary structure of all FT BMV RNAs" XX SQ Sequence 3234 BP; 827 A; 680 C; 848 G; 879 T; 0 other; gtagaccacg gaacgaggtt caatcccttg tcgaccacgg ttctgctact tgttctttgt 60 ttttcaccaa caaaatgtca agttctatcg atttgctgaa gttgattgct gagaagggtg 120 ctgacagcca gagtgcccaa gacatcgtag acaatcaggt tgcgcaacag ttatctgcgc 180 agattgaata cgcgaaaagg tctaagaaaa tcaacgttcg caataagctc tctattgagg 240 aggctgacgc cttccgtgac cgttatggtg gtgcctttga cttaaatttg actcagcagt 300 atcatgcgcc ccatagcctg gctggtgctc tgcgtgtagc ggagcattat gactgtctcg 360 acagttttcc ccctgaagac cccgttatag atttcggagg gtcttggtgg catcactttt 420 caagaaggga taaaagggtg cacagttgtt gtcctgtgtt gggtgttaga gacgctgccc 480 gacatgagga gaggatgtgc cgcatgcgaa aaattttgca agaaagcgat gatttcgatg 540 aagtcccgaa cttttgtctt aaccgagctc aagattgtga tgtccaagct gattgggcta 600 tctgtatcca cggcggttat gatatgggct tccaaggtct gtgtgacgcc atgcattcgc 660 atggagtacg cgtactacgt ggtaccgtta tgttcgacgg cgccatgttg tttgaccgcg 720 agggttttct tcccttgctt aaatgtcact ggcaacgtga cgggtcaggc gcggatgagg 780 tgatcaaatt cgattttgaa aatgaaagca cattatctta catccacgga tggcaagatt 840 tgggctcatt tttcaccgag tcggtgcatt gcatcgatgg aaccacctat ctgttggagc 900 gcgaaatgct gaaatgtaac atcatgacct ataagatcat cgctacaaat ttacgctgcc 960 cccgggagac actacgtcac tgtgtatggt ttgaagacat atctaagtac gtaggggtct 1020 caatacctga agactggagt ctcaatcgct ggaaatgtgt gcgcgtcgcc aaaaccacag 1080 tgagagaggt agaggagata gctttcagat gtttcaagga aagtaaagaa tggactgaga 1140 acatgaaagc tgtcgcatct atcttatccg ccaagtcgtc gactgttatt attaacggtc 1200 aggctatcat ggctggtgag cgcttagaca ttgaagatta tcatctagtg gcctttgctt 1260 tgactttgaa tctgtatcaa aagtacgaaa agcttacggc cctccgcgat gggatggaat 1320 ggaaaggttg gtgccatcac ttcaaaacta ggttttggtg gggtggagat tcatccaggg 1380 cgaaagtagg atggctgaga acattggcta gcagatttcc cctactacgt ctggattctt 1440 atgcggacag ttttaagttt ctgactcgtc tctcaaacgt tgaagaattt gagcaagatt 1500 ctgtaccgat atcacgtttg agaacgtttt ggactgaaga ggacttattc gaccggctgg 1560 agcatgaagt gcagacagcc aagaccaagc gctcgaagaa gaaggcgaaa gtcccgccag 1620 ctgctgagat acctcaggag gagtttcatg atgcccctga gagttcgagc cctgagtccg 1680 tcagtgatga cgttaaaccg gtgactgatg tggtcccgga tgccgaggtg tctgttgagg 1740 taccaacgga ccctcgtggc atatctagac acggagccat gaaggaattt gtgcgttatt 1800 gtaagagatt acataacaac tccgagtcta atcttcgtca cctatgggac atttccggcg 1860 gtcgcggaag tgagatcgca aataagagca tctttgagac ctaccatcgc atagacgata 1920 tggtgaatgt ccatttggcc aacggtaact ggttgtatcc taaaaaatac gattacactg 1980 ttggatataa tgagcatggt ttaggtccga agcacgcaga tgaaacgtac attgttgata 2040 aaacatgtgc atgctctaac ttgagggaca ttgcagaagc tagcgccaaa gtttctgtcc 2100 ctacatgcga tatttccatg gttgatggag ttgcgggatg cggtaaaacc actgccataa 2160 aagatgcatt ccgtatggga gaggacctaa ttgtgacggc gaatcgtaaa tcggccgagg 2220 acgtcaggat ggctttattc cctgacactt ataattccaa ggtagctttg gacgttgtgc 2280 gcaccgcgga ttctgcgatc atgcacggtg taccgtcctg tcataggctg cttgttgatg 2340 aggctggttt actacattat ggtcaactcc tggtggtggc tgctctgtct aaatgttcac 2400 aagttcttgc ctttggggac acagagcaga tttcgttcaa gtctcgtgac gcgggtttta 2460 aattgctcca cggtaatctg caatatgatc gccgtgacgt tgttcacaag acttaccggt 2520 gtccgcaaga tgttatcgct gctgttaatc tgctgaagcg taaatgcggt aatagggaca 2580 cgaagtatca atcctggaca tctgagtcca aagtttctag aagtctcacg aagcgtcgta 2640 ttacttctgg tttgcaggtc actattgatc cgaacagaac gtatcttacg atgactcaag 2700 ctgataaagc ggcccttcaa acgagggcta aggattttcc cgtgagcaag gactggattg 2760 atggacacat aaaaacagta cacgaagcgc aagggatctc tgttgacaac gtcactttgg 2820 ttcggcttaa gtcgaccaaa tgtgatttgt ttaaacatga ggagtactgt ttggttgcct 2880 taacacgaca caagaagtcc tttgagtatt gctttaacgg cgagctcgct ggtgatttga 2940 tctttaattg tgttaagtga tgcgcttgtc tctgtgtgag acctctgctc gaggagagcc 3000 ctgttccagg taggaacgtt gtggtctaac tcaagactag ctgaatcggt gctataaccg 3060 atagtcgtgg ttgacacgca gacctcttac aagagtgtct aggcgccttt gagagttact 3120 ctttgctctc ttcggaagaa cccttagggg ttcgtgcatg ggcttgcata gcaagtctta 3180 gaatgcgggt gtcgtacagt gttgaaaaac actgtaaatc tctaaaagag acca 3234 //