ID X00206; SV 1; linear; genomic RNA; STD; VRL; 5889 BP. XX AC X00206; XX DT 20-FEB-1985 (Rel. 05, Created) DT 12-SEP-1993 (Rel. 36, Last updated, Version 2) XX DE Cowpea mosaic virus bottom component RNA (B RNA) XX KW complementary DNA; polyprotein; protease. XX OS Cowpea mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus. XX RN [1] RP 1-5889 RX PUBMED; 16453487. RA Lomonossoff G.P., Shanks M.; RT "The nucleotide sequence of cowpea mosaic virus B RNA"; RL EMBO J. 2(12):2253-2258(1983). XX DR MD5; 891ae629960edc0c9cf6439f884bc192. DR EuropePMC; PMC2861173; 20229114. DR EuropePMC; PMC6321914; 30355698. XX CC Data kindly reviewed (23-JUL-1985) by G. Lomonossoff XX FH Key Location/Qualifiers FH FT source 1..5889 FT /organism="Cowpea mosaic virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:12264" FT misc_feature 1..206 FT /note="5' leader sequence" FT CDS 207..5807 FT /note="B RNA polyprotein" FT /db_xref="GOA:P03600" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/Swiss-Prot:P03600" FT /protein_id="CAA25029.1" FT /translation="MGLPEYEADSEALLSQLTIEFTPGMTVSSLLAQVTTNDFHSAIEF FT FAAEKAVDIEGVHYNAYMQQIRKNPSLLRISVVAYAFHVSDMVAETMSYDVYEFLYKHY FT ALFISNLVTRTLRFKELLLFCKQQFLEKMQASIVWAPELEQYLQVEGDAVAQGVSQLLY FT KMVTWVPTFVRGAVDWSVDAILVSFRKHFEKMVQEYVPMAHRVCSWLSQLWDKIVQWIS FT QASETMGWFLDGCRDLMTWGIATLATCSALSLVEKLLVAMGFLVEPFGLSGIFLRTGVV FT AAACYNYGTNSKGFAEMMALLSLAANCVSTVIVGGFFPGEKDNAQSSPVILLEGLAGQM FT QNFCETTLVSVGKTCTAVNAISTCCGNLKALAGRILGMLRDFIWKTLGFETRFLADASL FT LFGEDVDGWLKAISDLRDQFIAKSYCSQDEMMQILVLLEKGRQMRKSGLSKGGISPAII FT NLILKGINDLEQLNRSCSVQGVRGVRKMPFTIFFQGKSRTGKSLLMSQVTKDFQDHYGL FT GGETVYSRNPCDQYWSGYRRQPFVLMDDFAAVVTEPSAEAQMINLISSAPYPLNMAGLE FT EKGICFDSQFVFVSTNFLEVSPEAKVRDDEAFKNRRHVIVQVSNDPAKAYDAANFASNQ FT IYTILAWKDGRYNTVCVIEDYDELVAYLLTRSQQHAEEQEKNLANMMKSATFESHFKSL FT VEVLELGSMISAGFDIIRPEKLPSEAKEKRVLYSIPYNGEYCNALIDDNYNVTCWFGEC FT VGNPEQLSKYSEKMLLGAYEFLLCSESLNVVIQAHLKEMVCPHHYDKELNFIGKIGETY FT YHNQMVSNIGSMQKWHRAILFGIGVLLGKEKEKTWYQVQVANVKQALYDMYTKEIRDWP FT MPIKVTCGIVLAAIGGSAFWKVFQQLVGSGNGPVLMGVAAGAFSAEPQSRKPNRFDMQQ FT YRYNNVPLKRRVWADAQMSLDQSSVAIMSKCRANLVFGGTNLQIVMVPGRRFLACKHFF FT THIKTKLRVEIVMDGRRYYHQFDPANIYDIPDSELVLYSHPSLEDVSHSCWDLFCWDPD FT KELPSVFGADFLSCKYNKFGGFYEAQYADIKVRTKKECLTIQSGNYVNKVSRYLEYEAP FT TIPEDCGSLVIAHIGGKHKIVGVHVAGIQGKIGCASLLPPLEPIAQAQGAEEYFDFLPA FT EENVSSGVAMVAGLKQGVYIPLPTKTALVETPSEWHLDTPCDKVPSILVPTDPRIPAQH FT EGYDPAKSGVSKYSQPMSALDPELLGEVANDVLELWHDCAVDWDDFGEVSLEEALNGCE FT GVEYMERIPLATSEGFPHILSRNGKEKGKRRFVQGDDCVVSLIPGTTVAKAYEELEASA FT HRFVPALVGIECPKDEKLPMRKVFDKPKTRCFTILPMEYNLVVRRKFLNFVRFIMANRH FT RLSCQVGINPYSMEWSRLAARMKEKGNDVLCCDYSSFDGLLSKQVMDVIASMINELCGG FT EDQLKNARRNLLMACCSRLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKL FT MREQQAPELMVQSFDKLIGLVTYGDDNLISVNAVVTPYFDGKKLKQSLAQGGVTITDGK FT DKTSLELPFRRLEECDFLKRTFVQRSSTIWDAPEDKASLWSQLHYVNCNNCEKEVAYLT FT NVVNVLRELYMHSPREATEFRRKVLKKVSWITSGDLPTLAQLQEFYEYQRQQGGADNND FT TCDLLTSVDLLGPPLSFEKEAMHGCKVSEEIVTKNLAYYDFKRKGEDEVVFLFNTLYPQ FT SSLPDGCHSVTWSQGSGRGGLPTQSWMSYNISRKDSNINKIIRTAVSSKKRVIFCARDN FT MVPVNIVALLCAVRNKLMPTAVSNATLVKVMENAKAFKFLPEEFNFAFSDV" XX SQ Sequence 5889 BP; 1598 A; 1030 C; 1461 G; 1800 T; 0 other; tattaaaatc aatacaggtt ttgataaaag cgaacgtgga gaaatccaaa cctttctttc 60 tttcctcaat ctcttcaatt gcgaacgaaa tccaagcttt ggttttgctg aaacaaatac 120 acaacgtata ctgaatttgg caaatttctc tctctctctc tgtcattttc tttcttctgt 180 cgggactttc ttagtcttga cccaacatgg gtctcccaga atatgaggcc gatagtgagg 240 ctttattaag tcaactcact atcgaattca cacccggcat gacagtttct tcattgttgg 300 cacaagtcac cactaatgac tttcacagtg ccattgagtt ttttgctgca gaaaaagcag 360 tagacattga gggcgttcat tacaatgcgt atatgcaaca aattaggaaa aaccctagtt 420 tattacgcat ttccgtggta gcttatgctt tccacgtttc agacatggta gctgagacca 480 tgtcttatga tgtttatgaa tttctgtata aacattatgc ccttttcatc tctaatctgg 540 tgaccagaac actcagattt aaagagcttt tgctgttctg taagcagcaa tttctggaga 600 aaatgcaagc ttcaatagtc tgggctccgg aacttgagca atatcttcaa gttgaagggg 660 atgctgtggc tcaaggagtt tcacaactgt tatacaagat ggtcacttgg gtgcccactt 720 ttgtcagagg agcagtagac tggagcgttg atgcgatttt ggtcagtttc aggaaacatt 780 ttgaaaagat ggttcaggag tatgtgccca tggctcatcg cgtttgcagt tggctgagcc 840 aactatggga taagatcgtg caatggatct cacaagcaag tgagaccatg ggttggtttc 900 tagatggttg tcgggatttg atgacttggg gaattgccac tctcgcaaca tgtagtgctc 960 tctccctggt tgagaagctg ttagtcgcaa tgggttttct ggttgagcct ttcggcttga 1020 gtggaatctt cttgcggacg ggagttgttg cggcagcttg ttataactat gggactaatt 1080 ctaagggttt tgccgagatg atggctttgt tgtcattggc ggctaactgt gtctctacag 1140 ttatagttgg tggctttttc cctggtgaaa aggacaatgc acagagtagt cctgttatcc 1200 tcttagaagg attggctggg cagatgcaaa acttttgtga gactacactt gtcagtgttg 1260 ggaaaacatg cactgccgtc aatgctatct caacatgttg tgggaatctg aaagcactgg 1320 ccggaaggat cttgggcatg ctcagagatt ttatctggaa gactttgggc tttgagacca 1380 gatttctagc agatgcatct ttgctttttg gcgaggatgt tgatggatgg ctcaaagcaa 1440 tcagtgatct gcgagatcaa tttattgcca aatcatactg ttcgcaggat gagatgatgc 1500 agattttggt gttgcttgaa aagggaaggc agatgcggaa aagtggtctt tctaaaggag 1560 gcatttctcc tgctatcatt aatctgattc tcaaagggat taatgatctt gaacaattga 1620 accgcagctg ttcagtgcaa ggagtaagag gagttaggaa aatgccattt accattttct 1680 tccaaggaaa gtcacgcact ggtaagagtt tgctgatgag tcaggttaca aaggattttc 1740 aggatcacta tggattgggt ggagaaactg tgtacagtag aaatccttgt gatcaatatt 1800 ggagtggata tcggcggcaa ccttttgtgc tgatggatga ttttgccgcc gttgttactg 1860 agccgtctgc tgaggctcag atgatcaatc tgatttctag tgctccatat cctttgaata 1920 tggctggact tgaagaaaaa ggaatttgtt ttgattctca atttgttttt gtttccacca 1980 acttcttgga agtatctcct gaagccaaag ttagggacga tgaggctttc aagaacagga 2040 gacatgtgat tgttcaggtt tcaaatgatc ctgccaaagc atatgatgct gcaaattttg 2100 ctagcaacca aatttacacc attttggcat ggaaggatgg tcgatacaac accgtgtgcg 2160 ttattgagga ctatgatgag ctggtggcat atttgttgac taggagtcaa cagcatgctg 2220 aagagcagga gaagaatctt gctaacatga tgaagagtgc tacatttgaa agtcatttca 2280 aaagtttagt tgaagtcctt gagctcggtt ctatgatatc tgctggtttt gatatcattc 2340 ggccagaaaa acttcctagt gaagctaagg agaagagagt cctttacagt attccctaca 2400 atggggagta ttgtaatgca ctcattgatg acaattacaa tgttacttgc tggtttggtg 2460 agtgtgttgg taatcctgag cagctctcta agtacagtga aaagatgctt ttgggtgctt 2520 atgaatttct tctgtgttct gagagcttga atgttgtaat tcaggcacat ttgaaggaaa 2580 tggtttgccc tcaccattat gacaaggagc tcaattttat tggcaagata ggagagacct 2640 actatcacaa tcagatggtt tcaaatatcg gctctatgca gaaatggcat cgtgccattc 2700 tgtttggaat tggggttctc ttgggaaagg aaaaagagaa gacatggtac caagttcagg 2760 ttgccaatgt taaacaagct ctttacgaca tgtacactaa ggagattcgt gattggccca 2820 tgccgatcaa agtcacctgt ggaattgtct tggcagctat tgggggtagt gccttttgga 2880 aagtgtttca acaactagtg ggaagcggaa atggtccagt attgatgggt gtggctgctg 2940 gagcattcag tgctgagcct caaagtagaa agcccaatag gtttgatatg cagcaataca 3000 ggtacaacaa tgttcctctc aagagaagag tttgggcaga cgcacaaatg tctttggatc 3060 agagtagtgt tgctatcatg tctaagtgta gggctaatct ggtttttgga ggcactaatt 3120 tgcaaatagt catggtacca ggaagacgct ttttggcatg caaacatttc ttcacccaca 3180 taaagaccaa attgcgtgtg gaaatagtta tggatggaag aaggtactat catcaatttg 3240 atcctgcaaa tatttatgat atacctgatt ctgagttggt cttgtactcc catcctagct 3300 tggaagacgt ttcccattct tgctgggatc tgttctgttg ggacccagac aaagaattgc 3360 cttcagtatt tggagcggat ttcttgagtt gtaaatacaa caagtttggg ggtttttatg 3420 aggcgcaata tgctgatatc aaagtgcgca caaagaaaga atgccttacc atacagagtg 3480 gtaattatgt gaacaaggtg tctcgctatc ttgagtatga agctcctact atccctgagg 3540 attgtggatc tcttgtgata gcacacattg gtgggaagca caagattgtg ggtgttcatg 3600 ttgctggtat tcaaggtaag ataggatgtg cttccttatt gccaccattg gagccaatag 3660 cacaagcgca aggtgctgag gaatactttg attttcttcc agctgaagag aatgtatctt 3720 ctggagtggc tatggtagca ggactcaaac aaggagttta cataccatta cccacaaaaa 3780 cagcgctagt ggagaccccc tccgagtggc atttggacac accatgtgac aaagttccta 3840 gcattttagt tcccacggat ccccgaattc ctgcgcaaca tgaaggatat gatcctgcta 3900 agagtggggt ttccaagtat tcccagccta tgtctgctct ggaccctgag ttacttggcg 3960 aggtggctaa tgatgttctc gagctatggc atgactgcgc tgtagattgg gacgattttg 4020 gtgaagtgtc tctggaggaa gctttgaatg gatgtgaagg agtggaatat atggaaagga 4080 ttccattagc aacttctgag ggctttccgc acattctttc tagaaatggg aaagaaaagg 4140 ggaaaagacg gtttgttcag ggagatgatt gtgttgtctc actaattcca ggaactactg 4200 tagccaaagc ttatgaggag ttggaagcaa gtgcacacag atttgttccc gctcttgttg 4260 ggattgaatg tccaaaagat gagaagttgc ctatgagaaa ggtttttgat aagcctaaga 4320 ccaggtgttt taccattttg ccaatggaat ataatttggt cgttcgtagg aagtttctga 4380 attttgtgcg ctttatcatg gccaatcgtc acagactcag ttgtcaagtg ggtattaatc 4440 catattcaat ggaatggagt cgcttagcag caaggatgaa agagaaaggc aatgatgtct 4500 tgtgttgtga ttatagctca ttcgatggct tgctttctaa gcaagtgatg gatgtcattg 4560 ctagcatgat caatgaactt tgtggtggag aggatcaact caaaaatgca aggcgaaact 4620 tgttaatggc gtgttgctct aggttggcta tttgcaagaa tacagtatgg agagttgagt 4680 gtggtattcc ttcagggttt ccaatgacag tgattgtgaa tagcattttt aatgagattc 4740 tcattcgcta tcattacaag aaactcatgc gcgaacaaca agctcctgaa ctgatggtac 4800 agagttttga taaactcata gggctggtga cttatggtga tgataatctg atttcagtga 4860 atgctgttgt gacaccctat tttgatggga agaaattgaa gcaatctttg gctcagggtg 4920 gtgtgactat cactgatggt aaggacaaaa caagtttgga acttcctttt cgcagattgg 4980 aagaatgtga ttttctcaag agaacttttg ttcagaggag cagtaccatc tgggacgctc 5040 cagaggataa ggcaagtttg tggtcgcagc ttcattatgt taattgcaac aattgtgaga 5100 aagaagttgc ttatttgact aatgttgtta atgttcttcg tgaactttat atgcatagtc 5160 ctcgggaagc cacagaattt aggaggaagg tcttaaagaa ggtcagttgg atcactagtg 5220 gagatttgcc tactttggca caattgcaag agttctatga gtaccagcgg cagcaaggtg 5280 gggcagacaa caatgacact tgtgacttgt taacaagtgt agacttgcta ggtcctcctt 5340 tgtcttttga gaaagaagcg atgcacggat gcaaagtgtc tgaagaaatc gtcaccaaga 5400 atttggcata ttacgatttc aaaaggaaag gtgaggatga agtggtattt ctgttcaata 5460 cgctctatcc tcagagttca ttgcctgatg ggtgtcactc tgtgacctgg tctcagggta 5520 gtggaagggg aggtttgccc acacaaagtt ggatgagcta taatataagc aggaaagatt 5580 ctaatatcaa caagattatt agaactgctg tttcttcgaa gaaacgagtg atattctgtg 5640 ctcgtgataa tatggttcct gttaacattg tagctttgct ctgtgctgtt agaaacaagc 5700 tgatgcccac tgctgtatct aatgctacac ttgtcaaggt gatggaaaat gccaaagctt 5760 tcaagttttt accagaagag ttcaatttcg ctttttctga tgtttaggta aataatgctt 5820 atgtttttgt ttgctcctgt ttagcaggtc gttccttcag caagaacaac aaaaatatgt 5880 gtttttatt 5889 //