ID V01409; SV 1; linear; genomic RNA; STD; VRL; 6398 BP. XX AC V01409; XX DT 13-JUL-1983 (Rel. 03, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Tobacco mosaic virus genome (variant 2) XX KW coat protein; genome. XX OS Tobacco mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6398 RX DOI; 10.1073/pnas.79.19.5818. RX PUBMED; 6964389. RA Goelet P., Lomonossoff G.P., Butler P.J., Akam M.E., Gait M.J., Karn J.; RT "Nucleotide sequence of tobacco mosaic virus RNA"; RL Proc. Natl. Acad. Sci. U.S.A. 79(19):5818-5822(1982). XX DR MD5; dd49ace7a84ba305482fd4ef02a8467a. DR EuropePMC; PMC4072989; 24887356. DR GOA; P03586. DR GOA; P69687. DR InterPro; IPR001337; TMV-like_coat. DR InterPro; IPR001788; Tymovirus_RNA-dep_RNA_pol. DR InterPro; IPR002588; Alphavirus-like_MT_dom. DR InterPro; IPR007094; RNA-dir_pol_PSvirus. DR InterPro; IPR027351; (+)RNA_virus_helicase_core_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR036417; TMV-like_coat_sf. DR PDB; 1EI7; X-ray. DR PDB; 2TMV; Fiber. DR PDB; 3J06; EM. DR PDB; 3KML; X-ray. DR PDB; 4GQH; X-ray. DR PDB; 4UDV; EM. DR PDB; 6I5A; EM. DR RFAM; RF01072; TMV_UPD-PK3. DR RFAM; RF01077; TLS-PK2. DR RFAM; RF01114; TMV_UPD-PK1. DR RFAM; RF01115; TMV_UPD-PK2. DR UniProtKB/Swiss-Prot; P03586; RDRP_TMV. DR UniProtKB/Swiss-Prot; P69687; CAPSD_TMV. XX FH Key Location/Qualifiers FH FT source 1..6398 FT /organism="Tobacco mosaic virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:12242" FT CDS 4906..5712 FT /product="movement protein" FT /db_xref="GOA:P03583" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/Swiss-Prot:P03583" FT /protein_id="CAA24689.1" FT /translation="MALVVKGKVNINEFIDLTKMEKILPSMFTPVKSVMCSKVDKIMVH FT ENESLSEVNLLKGVKLIDSGYVCLAGLVVTGEWNLPDNCRGGVSVCLVDKRMERADEAT FT LGSYYTAAAKKRFQFKVVPNYAITTQDAMKNVWQVLVNIRNVKMSAGFCPLSLEFVSVC FT IVYRNNIKLGLREKITNVRDGGPMELTEEVVDEFMEDVPMSIRLAKFRSRTGKKSDVRK FT GKNSSNDRSVPNKNYRNVKDFGGMSFKKNNLIDDDSEATVAESDSF" XX SQ Sequence 6398 BP; 1859 A; 1228 C; 1547 G; 1764 T; 0 other; gtatttttac aacaattacc aacaacaaca acaaacaaca acaacattac attttacatt 60 ctacaactac aatggcatac acacaaacag ccacatcgtc cgctttgctt gagaccgtcc 120 gaggtaacaa taccttggtc aacgatcttg caaagcggcg tctatatgac acagcggtcg 180 atgaatttaa tgctagggac cgcaggccta aagttaattt ttccaaagta ataagcgagg 240 agcagacgct tattgctacc cgggcgtatc cagaattcca aattacattt tataacacgc 300 aaaatgccgt gcattcgctt gcaggtggat tgcgatcttt agaactggaa tatctgatga 360 tgcaaattcc ctacggatca ttgacttatg acataggcgg gaattttgca tcgcatctgt 420 tcaagggacg agcatatgta cactgctgca tgcccaacct ggacgttcga gacatcatgc 480 ggcacgaagg ccagaaagac agtattgaac tatacctttc taggctagag agagggggga 540 aaacagtccc caacttccaa aaggaagcat ttgacagata cgcagaaatt cctgaagacg 600 ctgtctgtca caatactttc cagacaatgc gacatcagcc gatgcagcaa tcaggcagag 660 tgtatgccat tgcgctacac agcatatatg acataccagc cgatgagttc ggggcggcac 720 tcttgaggaa aaatgtccat acgtgctatg ccgctttcca cttctctgag aacctgcttc 780 ttgaagattc atacgtcaat ttggacgaaa tcaacgcgtg tttttcgcgc gatggagaca 840 agttgacctt ttcttttgca tcagagagta ctcttaatta ttgtcatagt tattctaata 900 ttcttaagta tgtgtgcaaa acttacttcc cggcctctaa tagagaggtt tacatgaagg 960 agtttttagt caccagagtt aatacctggt tttgtaagtt ttctagaata gatacttttc 1020 ttttgtacaa aggtgtggcc cataaaagtg tagatagtga gcagttttat actgcaatgg 1080 aagacgcatg gcattacaaa aagactcttg caatgtgcaa cagcgagaga atcctccttg 1140 aggattcatc atcagtcaat tactggtttc ccaaaatgag ggatatggtc atcgtaccat 1200 tattcgacat ttctttggag actagtaaga ggacgcgcaa ggaagtctta gtgtccaagg 1260 atttcgtgtt tacagtgctt aaccacattc gaacatacca ggcgaaagct cttacatacg 1320 caaatgtttt gtcctttgtc gaatcgattc gatcgagggt aatcattaac ggtgtgacag 1380 cgaggtccga atgggatgtg gacaaatctt tgttacaatc cttgtccatg acgttttacc 1440 tgcatactaa gcttgccgtt ctaaaggatg acttactgat tagcaagttt agtctcggtt 1500 cgaaaacggt gtgccagcat gtgtgggatg agatttcgct ggcgtttggg aacgcatttc 1560 cctccgtgaa agagaggctc ttgaacagga aacttatcag agtggcaggc gacgcattag 1620 agatcagggt gcctgatcta tatgtgacct tccacgacag attagtgact gagtacaagg 1680 cctctgtgga catgcctgcg cttgacatta ggaagaagat ggaagaaacg gaagtgatgt 1740 acaatgcact ttcagagtta tcggtgttaa gggagtctga caaattcgat gttgatgttt 1800 tttcccagat gtgccaatct ttggaagttg acccaatgac ggcagcgaag gttatagtcg 1860 cggtcatgag caatgagagc ggtctgactc tcacatttga acgacctact gaggcgaatg 1920 ttgcgctagc tttacaggat caagagaagg cttcagaagg tgctttggta gttacctcaa 1980 gagaagttga agaaccgtcc atgaagggtt cgatggccag aggagagtta caattagctg 2040 gtcttgctgg agatcatccg gagtcgtcct attctaagaa cgaggagata gagtctttag 2100 agcagtttca tatggcagcg gcagattcgt taattcgtaa gcagatgagc tcgattgtgt 2160 acacgggtcc gattaaagtt cagcaaatga aaaactttat cgatagcctg gtagcatcac 2220 tatctgctgc ggtgtcgaat ctcgtcaaga tcctcaaaga tacagctgct attgaccttg 2280 aaacccgtca aaagtttgga gtcttggatg ttgcatctag gaagtggtta atcaaaccaa 2340 cggccaagag tcatgcatgg ggtgttgttg aaacccacgc gaggaagtat catgtggcgc 2400 ttttggaata tgatgagcag ggtgtggtga catgcgatga ttggagaaga gtagctgtca 2460 gctctgagtc tgttgtttat tccgacatgg cgaaactcag aactctgcgc agactgcttc 2520 gaaacggaga accgcatgtc agtagcgcaa aggttgttct tgtggacgga gttccgggct 2580 gtggaaaaac caaagaaatt ctttccaggg ttaattttga tgaagatcta attttagtac 2640 ctgggaagca agccgcggaa atgatcagaa gacgtgcgaa ttcctcaggg attattgtgg 2700 ccacgaagga caacgttaaa accgttgatt ctttcatgat gaattttggg aaaagcacac 2760 gctgtcagtt caagaggtta ttcattgatg aagggttgat gttgcatact ggttgtgtta 2820 attttcttgt ggcgatgtca ttgtgcgaaa ttgcatatgt ttacggagac acacagcaga 2880 ttccatacat caatagagtt tcaggattcc cgtaccccgc ccattttgcc aaattggaag 2940 ttgacgaggt ggagacacgc agaactactc tccgttgtcc agccgatgtc acacattatc 3000 tgaacaggag atatgagggc tttgtcatga gcacttcttc ggttaaaaag tctgtttcgc 3060 aggagatggt cggcggagcc gccgtgatca atccgatctc aaaacccttg catggcaaga 3120 tcctgacttt tacccaatcg gataaagaag ctctgctttc aagagggtat tcagatgttc 3180 acactgtgca tgaagtgcaa ggcgagacat actctgatgt ttcactagtt aggttaaccc 3240 ctacaccagt ctccatcatt gcaggagaca gcccacatgt tttggtcgca ttgtcaaggc 3300 acacctgttc gctcaagtac tacactgttg ttatggatcc tttagttagt atcattagag 3360 atctagagaa acttagctcg tacttgttag atatgtataa ggtcgatgca ggaacacaat 3420 agcaattaca gattgactcg gtgttcaaag gttccaatct ttttgttgca gcgccaaaga 3480 ctggtgatat ttctgatatg cagttttact atgataagtg tctcccaggc aacagcacca 3540 tgatgaataa ttttgatgct gttaccatga ggttgactga catttcattg aatgtcaaag 3600 attgcatatt ggatatgtct aagtctgttg ctgcgcctaa ggatcaaatc aaaccactaa 3660 tacctatggt acgaacggcg gcagaaatgc cacgccagac tggactattg gaaaatttag 3720 tggcgatgat taaaaggaac tttaacgcac ccgagttgtc tggcatcatt gatattgaaa 3780 atactgcatc tttggttgta gataagtttt tcgatagtta tttgcttaaa gaaaaaagaa 3840 aaccaaataa aaatgtttct ttgttcagta gagagtctct caatagatgg ttagaaaagc 3900 aggaacaggt aacaataggc cagctcgcag attttgattt tgtggatttg ccagcagttg 3960 atcagtacag acacatgatc aaagcacaac ccaagcaaaa gttggacact tcaatccaaa 4020 cggagtaccc ggctttgcag acgattgtgt accattcaaa aaagatcaat gcaatattcg 4080 gcccgttgtt tagtgagctt actaggcaat tactggacag tgttgattcg agcagatttt 4140 tgtttttcac aagaaagaca ccagcgcaga ttgaggattt cttcggagat ctcgacagtc 4200 atgtgccgat ggatgtcttg gagctggata tatcaaaata cgacaaatct cagaatgaat 4260 tccactgtgc agtagaatac gagatctggc gaagattggg ttttgaagac ttcttgggag 4320 aagtttggaa acaagggcat agaaagacca ccctcaagga ttataccgca ggtataaaaa 4380 cttgcatctg gtatcaaaga aagagcgggg acgtcacgac gttcattgga aacactgtga 4440 tcattgctgc atgtttggcc tcgatgcttc cgatggagaa aataatcaaa ggagcctttt 4500 gcggtgacga tagtctgctg tactttccaa agggttgtga gtttccggat gtgcaacact 4560 ccgcgaatct tatgtggaat tttgaagcaa aactgtttaa aaaacagtat ggatactttt 4620 gcggaagata tgtaatacat cacgacagag gatgcattgt gtattacgat cccctaaagt 4680 tgatctcgaa acttggtgct aaacacatca aggattggga acacttggag gagttcagaa 4740 ggtctctttg tgatgttgct gtttcgttga acaattgtgc gtattacaca cagttggacg 4800 acgctgtatg ggaggttcat aagaccgccc ctccaggttc gtttgtttat aaaagtctgg 4860 tgaagtattt gtctgataaa gttcttttta gaagtttgtt tatagatggc tctagttgtt 4920 aaaggaaaag tgaatatcaa tgagtttatc gacctgacaa aaatggagaa gatcttaccg 4980 tcgatgttta cccctgtaaa gagtgttatg tgttccaaag ttgataaaat aatggttcat 5040 gagaatgagt cattgtcaga ggtgaacctt cttaaaggag ttaagcttat tgatagtgga 5100 tacgtctgtt tagccggttt ggtcgtcacg ggcgagtgga acttgcctga caattgcaga 5160 ggaggtgtga gcgtgtgtct ggtggacaaa aggatggaaa gagccgacga ggccactctc 5220 ggatcttact acacagcagc tgcaaagaaa agatttcagt tcaaggtcgt tcccaattat 5280 gctataacca cccaggacgc gatgaaaaac gtctggcaag ttttagttaa tattagaaat 5340 gtgaagatgt cagcgggttt ctgtccgctt tctctggagt ttgtgtcggt gtgtattgtt 5400 tatagaaata atataaaatt aggtttgaga gagaagatta caaacgtgag agacggaggg 5460 cccatggaac ttacagaaga agtcgttgat gagttcatgg aagatgtccc tatgtcgatc 5520 aggcttgcaa agtttcgatc tcgaaccgga aaaaagagtg atgtccgcaa agggaaaaat 5580 agtagtaacg atcggtcagt gccgaacaag aactatagaa atgttaagga ttttggagga 5640 atgagtttta aaaagaataa tttaatcgat gatgattcgg aggctactgt cgccgaatcg 5700 gattcgtttt aaatatgtct tacagtatca ctactccatc tcagttcgtg ttcttgtcat 5760 cagcgtgggc cgacccaata gagttaatta atttatgtac taatgcctta ggaaatcagt 5820 ttcaaacaca acaagctcga actgtcgttc aaagacaatt cagtgaggtg tggaaacctt 5880 caccacaagt aactgttagg ttccctgaca gtgactttaa ggtgtacagg tacaatgcgg 5940 tattagaccc gctagtcaca gcactgttag gtgcattcga cactagaaat agaataatag 6000 aagttgaaaa tcaggcgaac cccacgactg ccgaaacgtt agatgctact cgtagagtag 6060 acgacgcaac ggtggccata aggagcgcga taaataattt aatagtagaa ttgatcagag 6120 gaaccggatc ttataatcgg agctctttcg agagctcttc tggtttggtt tggacctctg 6180 gtcctgcaac ttgaggtagt caagatgcat aataaataac ggattgtgtc cgtaatcaca 6240 cgtggtgcgt acgataacgc atagtgtttt tccctccact taaatcgaag ggttgtgtct 6300 tggatcgcgc gggtcaaatg tatatggttc atatacatcc gcaggcacgt aataaagcga 6360 ggggttcgaa tccccccgtt acccccggta ggggccca 6398 //