ID   U95995; SV 1; linear; genomic RNA; STD; VRL; 1786 BP.
XX
AC   U95995;
XX
DT   13-OCT-1997 (Rel. 52, Created)
DT   23-SEP-2009 (Rel. 102, Last updated, Version 6)
XX
DE   Cryptosporidium parvum virus 1 strain KSU-1 RNA-dependent RNA polymerase
DE   gene, complete cds.
XX
KW   .
XX
OS   Cryptosporidium parvum virus 1
OC   Viruses; Riboviria; Partitiviridae; Cryspovirus.
XX
RN   [1]
RP   1-1786
RX   DOI; 10.1046/j.1365-2958.1997.5721933.x.
RX   PUBMED; 9383154.
RA   Khramtsov N.V., Woods K.M., Nesterenko M.V., Dykstra C.C., Upton S.J.;
RT   "Virus-like, double-stranded RNAs in the parasitic protozoan
RT   Cryptosporidium parvum";
RL   Mol. Microbiol. 26(2):289-300(1997).
XX
RN   [2]
RP   1-1786
RA   Khramtsov N.V., Woods K.M., Nesterenko M.V., Dykstra C.C., Upton S.J.;
RT   ;
RL   Submitted (02-APR-1997) to the INSDC.
RL   Biology, Kansas State University, Ackert Hall, Manhattan, KS 66506, USA
XX
DR   MD5; f3028819f201b9e16cbf69e21a1c586d.
DR   EuropePMC; PMC96679; 10417162.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1786
FT                   /organism="Cryptosporidium parvum virus 1"
FT                   /strain="KSU-1"
FT                   /mol_type="genomic RNA"
FT                   /dev_stage="sporozoite"
FT                   /note="extrachromosomal large dsRNA element"
FT                   /db_xref="taxon:675060"
FT   CDS             134..1708
FT                   /codon_start=1
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="large segment"
FT                   /db_xref="GOA:O15925"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/Swiss-Prot:O15925"
FT                   /protein_id="AAC47805.1"
FT                   /translation="MKFVNIYEIQRFDGQPTRHGIAPKKIFRSKYIPTGLVPRLKYWRD
FT                   VPSRAEMSKRIGKYFEDEFKFYPNEEKLNEAVNIVQEKWISHYGTSLNVTSVSESFRTL
FT                   PKSTSAGLPFKSGCTKYEARNKMMRFARSQWDRVSKELQLQVLPCRLGARCQLRKRGEN
FT                   KPRLIWAYPGYLSIIENQYLTAIKKVPPPNFIGWSTNWLDGGKSLNRLLFGDKWTWQSI
FT                   AQIDFSSFDATVRTELIFHAFKILRSLFDLTRTENIMLDQLRHYFINTPILFYDKIIVK
FT                   NRGIPSGSAFTQIIGTIVNMIACQYASLRSRDYNLRIPFSCWLGDDSFLNFETALCRQE
FT                   FEYDYLEKFKELGLNVSIDKTHYTTRFIDDFEVRFKGVRPYVKFLGKQIDILLDLTFHN
FT                   DLDKLDAQMALPEKEDLSAYETGVRLIGLVWAYGAHYDIYLRILKVYLSLKLKPEFHVQ
FT                   QLLSYSEKPERTKRYQENFFSSMKYQLNLDLDIYDLLAFPKFWDVSNRYFGSKYERLDF
FT                   RSHKIYG"
FT   misc_feature    1711..1785
FT                   /note="encodes GC rich region"
XX
SQ   Sequence 1786 BP; 578 A; 314 C; 361 G; 533 T; 0 other;
     ggaaagaagt atagctcaat tttcgtccaa acgaaaattt tctttccgag ttgatgacta        60
     taaatcaagg ctaaccacct actctacggt tactagtatt gacagttcga cctgcgcggt       120
     tctttctacc gaaatgaagt ttgtcaatat ctatgagata caacggtttg atggccaacc       180
     tactagacat ggaatagctc caaagaaaat atttcgttcc aaatacatac caactggctt       240
     agtcccaaga ctaaagtatt ggcgagatgt accttctaga gctgaaatgt ctaaaaggat       300
     aggtaaatac tttgaagatg aattcaagtt ttatccgaat gaagagaagt tgaatgaggc       360
     agtaaacata gttcaagaaa agtggatatc tcattatggc acgagtttaa atgtcacaag       420
     tgtcagtgag agtttcagaa cactaccgaa atcgacttca gctggtctac cttttaaaag       480
     cggttgtact aaatatgaag ctagaaataa gatgatgcgc tttgctagat cccagtggga       540
     tagagtaagt aaggaattac aattacaagt gttaccttgt agacttggag cgcgttgtca       600
     attaagaaaa cgtggtgaga acaaacctcg tctaatctgg gcgtatcctg ggtacttatc       660
     tataatagaa aatcaatatt taactgccat taagaaagta cctcccccaa actttatagg       720
     atggtccacc aattggttag atggtgggaa aagtctcaat agactgctat ttggagataa       780
     gtggacgtgg caatccatag cacaaataga cttctcaagt tttgacgcta ctgtaagaac       840
     ggagttaata ttccacgctt tcaaaatcct tcgttcattg tttgatctga ctcgaacgga       900
     aaacataatg ttggatcaac ttagacatta ttttataaat actcctattt tattttacga       960
     caagattatt gtaaagaata gaggtatacc atcaggtagc gcatttacac aaataatagg      1020
     aacaattgtg aatatgattg cttgtcaata cgcatctttg cgtagtcgcg attataattt      1080
     acgaattcct ttttcttgtt ggttgggaga tgatagtttc ctaaacttcg agacagcttt      1140
     gtgtagacaa gaatttgagt acgactattt ggagaaattt aaagagttag gacttaacgt      1200
     ctcaattgac aagacacact atactactag gtttattgac gattttgagg taagattcaa      1260
     aggagtcaga ccttatgtta agtttttagg aaaacagatc gatattcttc ttgatctaac      1320
     tttccacaac gatttagata aactcgacgc ccaaatggct cttcctgaga aggaggacct      1380
     ctccgcctat gaaactggag ttaggttaat aggtttggta tgggcatatg gtgctcacta      1440
     tgatatctac ttacgtatac ttaaagtata tttaagtttg aaattgaagc cagagtttca      1500
     cgttcaacaa cttctttctt acagtgagaa gcccgaaaga acgaaaagat atcaagaaaa      1560
     ctttttctcc tcaatgaagt atcagctaaa tttggatttg gacatctacg atctcttagc      1620
     ttttccaaag ttctgggacg tatctaatag gtacttcgga agtaagtatg aaagattaga      1680
     tttcaggagt cacaaaattt atggataaaa ggcgcccaat ctatcgcctc catcgtgtgt      1740
     agtcggccac atgttaccca agaccggcag ggtccgaggg aagcct                     1786
//