ID U93193; SV 1; linear; genomic RNA; STD; VRL; 2939 BP. XX AC U93193; XX DT 03-FEB-1998 (Rel. 54, Created) DT 16-OCT-2003 (Rel. 77, Last updated, Version 2) XX DE Spinach latent virus putative polymerase and putative 2b protein genes, DE complete cds. XX KW . XX OS Spinach latent virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-2939 RX DOI; 10.1007/s00705-003-0148-z. RX PUBMED; 14551826. RA Scott S.W., Zimmerman M.T., Ge X.; RT "Viruses in subgroup 2 of the genus Ilarvirus share both serological RT relationships and characteristics at the molecular level"; RL Arch. Virol. 148(10):2063-2075(2003). XX RN [2] RP 1-2939 RA Scott S.W.; RT ; RL Submitted (12-MAR-1997) to the INSDC. RL Plant Pathology & Physiology, Clemson University, Long Hall, Clemson, SC RL 29634-0377, USA XX DR MD5; 742d47ec4e99f5a6b7a83dfdb4c438d8. DR EuropePMC; PMC5491605; 28713347. XX FH Key Location/Qualifiers FH FT source 1..2939 FT /organism="Spinach latent virus" FT /host="Spinacia oleracea" FT /lab_host="Chenopodium quinoa" FT /mol_type="genomic RNA" FT /db_xref="taxon:42680" FT 5'UTR 1..71 FT CDS 72..2465 FT /codon_start=1 FT /product="putative polymerase" FT /db_xref="GOA:O57162" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:O57162" FT /protein_id="AAB99734.1" FT /translation="MDSYHFLSQLCDLNVLTHALYVNQVFEIVDQSTTSYMQMWLYSRV FT IVPVLKYHLSGDIILDKLHDVFLGTFRSMMVPMIMLNRLSFVVKMTTMNHHRKAYLPLE FT EREKIHAATFLGHDHWASVTSGSSFYDDLEILADETVNDDLHFDKESSMPDEYQIMWND FT GTIDSVWSSQFECEEPPKPKFIPRPSDKVCDPVVIQDAVNDIFPFHHEMDDRYFQTLVE FT TQDISLEVSKCWIDASNFRDFVKGPNSYVEPVFQTGATSKRVHTQREALLAVKKRNMNI FT PELQSTFDLDAEVNTCFKRFLTHVVDLPRLKRLQPMTGVEVEYFNQYLLGKNPPVKEYQ FT GPLTLTALDKYMHMVKTIVKPVEDNSLKHERPLCATITYHKKGIVMQASPRFLSAMSRL FT VYVLKSKIHIPSGKWHQLFTLDAGKSDAVKWFKEVDFSKFDKSQGELHHKVQEKIFNAL FT KLPPGFVEMWFSAHERSHIVDREAGIGFSVDYQRRTGDANTYLGNTLVTLICLARVYDL FT CNPNITFVIASGDDSLIGSVEELPRGPGEFIYNPVNFEAKFPHNQPFIWLKVLVSVDLE FT DGGREVIAVPNPAKLLIGMGRRDCQYQALDDLYQSWLDVIYYFRDARVCEKVADLCAYR FT QTRRSSMYLLSALLSLPSCFANKKKFKWLCYRLREQGCLKKDIYPVAKPISAHNIRKED FT SNGCDVNQGTDDSFSRKKNRGCWEYVPKMLQTDVSVPVTDKSFHSNRGSSVSPTDCGDG FT GCSRSASSIGSKNTKPRHRFRAAGVHQPSGRDPDRIPPNHRRSA" FT CDS 2158..2745 FT /codon_start=1 FT /product="putative 2b protein" FT /db_xref="UniProtKB/TrEMBL:O57163" FT /protein_id="AAB99735.1" FT /translation="MDAMLIKEQMIRSHGKRIVDAGSMSQRCCRLMCLFLLLINLSTVT FT EARRFPQPIAVMEGAPDPPARLVVKIPNLAIDFELQEFTNPAVVIQTVYRRIIDEVPKG FT WYGLKSWSSSNYGDVVAGLKRAARVKVHFSIPGSDWAYTLNLSEVVSGLALPKLPIPEK FT YLRMPIAITIDDTVNKIGDGFDDVPSPWYLYQ" FT 3'UTR 2746..2939 XX SQ Sequence 2939 BP; 805 A; 551 C; 689 G; 894 T; 0 other; gtattgtgca gtattatttt acgcacgacc cggattaatc atttttgtga gaatataccc 60 gatagctctc aatggattct taccacttct tatctcagtt gtgtgacttg aatgttctga 120 ctcatgcgct ttatgttaat caagtgtttg agattgtgga tcagtccaca actagttata 180 tgcagatgtg gctttattcc cgtgttattg tcccagtttt gaaatatcat ctcagtggag 240 atattatatt ggataaattg cacgatgtgt tccttggaac ctttcgttca atgatggtgc 300 cgatgattat gttgaaccga ctttcattcg tcgtgaagat gacgacgatg aaccaccacc 360 ggaaagcgta tttgccgctt gaagaaaggg aaaaaattca tgctgcgacg tttcttggtc 420 atgatcattg ggcaagcgtt acttcgggat catcttttta tgatgatctc gaaattctcg 480 ctgatgagac cgtgaacgat gatttgcatt ttgataaaga atcttccatg ccagatgagt 540 atcagatcat gtggaatgat ggtacaattg attccgtttg gtctagtcag tttgaatgcg 600 aagaaccacc gaaaccgaaa tttataccac gcccttctga taaggtgtgt gatccagtgg 660 ttattcaaga tgccgtgaac gatatattcc catttcatca tgagatggat gatcgatatt 720 tccagacgtt agtggagaca caggatattt cccttgaggt ttcgaagtgt tggatagatg 780 cctccaattt cagagatttt gttaagggtc caaattctta tgttgagcct gtgtttcaaa 840 ccggtgccac tagtaagaga gtgcatactc aacgtgaggc tcttttagct gtgaagaaaa 900 ggaatatgaa tataccggaa ttgcaatcca ctttcgatct tgatgcggaa gtcaacacgt 960 gtttcaaacg gtttctcaca cacgttgttg atttgccacg attaaaaagg ttgcaaccta 1020 tgactggtgt tgaggtggaa tacttcaatc aatacttgct tgggaagaat ccacctgtga 1080 aggaatatca aggtcccttg acattgactg cacttgataa atatatgcat atggtcaaga 1140 cgattgtgaa accagtcgag gacaattcgt tgaagcatga gcgacctttg tgtgccacta 1200 ttacctatca taagaagggt atagtgatgc aggcctcacc tcggtttttg agtgctatgt 1260 caagattggt ttatgtcttg aaatcaaaaa tccatattcc cagtggtaag tggcatcaac 1320 ttttcacgct ggatgctgga aaatccgatg ccgtaaaatg gtttaaagag gtggattttt 1380 caaagtttga caagtctcag ggcgagttac atcacaaagt gcaggagaag atatttaatg 1440 ctttaaagtt acctcccgga tttgttgaga tgtggttttc cgcccatgag cgatcacaca 1500 ttgtggacag agaagcaggg attggatttt ccgttgatta tcaacggaga acaggagatg 1560 ccaatacgta tttgggtaac actttggtta ctttgatttg tttggctaga gtgtatgatt 1620 tatgcaatcc caatattacc tttgtcatcg cttcgggtga tgattcttta attggaagcg 1680 tcgaagaatt accgcgcgga ccaggagaat ttatttacaa ccctgttaat tttgaagcga 1740 aattccctca taatcaacca tttatatggc tcaaagtttt agtaagtgtt gatcttgagg 1800 atggtggaag agaagtgatc gctgttccaa accctgcgaa gttgttaatt ggtatgggaa 1860 gacgagactg tcaataccaa gctcttgatg atttgtatca atcatggctt gatgtgatat 1920 attattttag agatgctcgc gtgtgtgaaa aagttgctga tttgtgcgca tatagacaga 1980 cgcgaagaag ctctatgtat ttattaagcg ctctgttgag cttgcctagt tgttttgcta 2040 ataagaagaa atttaagtgg ctctgttatc gtttaagaga gcaagggtgt ctgaagaagg 2100 atatttatcc tgtagcaaaa cctataagtg cccataatat aaggaaagaa gattcaaatg 2160 gatgcgatgt taatcaagga acagatgatt cgttctcacg gaaaaagaat cgtggatgct 2220 gggagtatgt cccaaagatg ttgcagactg atgtgtctgt tcctgttact gataaatctt 2280 tccacagtaa cagaggctcg tcggtttccc caaccgattg cggtgatgga gggtgctcca 2340 gatccgccag ctcgattggt agtaaaaata ccaaacctcg ccatagattt cgagctgcag 2400 gagttcacca acccagcggt cgtgatccag accgtatacc gccgaatcat cgacgaagtg 2460 cctaaaggtt ggtatggttt aaagtcctgg tcttcctcca attatggaga cgttgtggcc 2520 ggactaaaaa gggctgcacg agttaaagtg catttttcta taccgggttc agattgggct 2580 tataccttaa atctgtccga agtggtatct gggttagcac tccccaaatt accaattccc 2640 gagaaatatc tcaggatgcc gattgctatc acaatcgatg ataccgtcaa taaaattggc 2700 gatggttttg atgatgtacc atctccatgg tacttgtatc aatgatgtgt tcctttcatg 2760 gaacctagtg aggggccctc cggggtgtgc tcagcaccta gcctaagcta agtccatatg 2820 cccacctacg ctgctccggg tggatgctta tacatgctat ggatgcctac atttgaaata 2880 atgtagatgc ctaatactct ctctcaggga gagagtttag atgcctccaa aggagatgc 2939 //