ID   U84580; SV 1; linear; genomic DNA; STD; VRL; 1563 BP.
XX
AC   U84580;
XX
DT   29-MAY-1998 (Rel. 55, Created)
DT   29-MAY-1998 (Rel. 55, Last updated, Version 1)
XX
DE   Sugarcane mosaic virus NIb replicase (NIb) gene, partial cds.
XX
KW   .
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1563
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   "Sequence diversity in the coat protein coding region of sugarcane mosaic
RT   potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1563
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   ;
RL   Submitted (10-JAN-1997) to the INSDC.
RL   Center for Molecular Biotechnology, Queensland University of Technology,
RL   George St, Brisbane, Qld 4001, Australia
XX
DR   MD5; c256d6d6c6f8713a395b57e9df1eaf71.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1563
FT                   /organism="Sugarcane mosaic virus"
FT                   /strain="A"
FT                   /isolate="Louisiana, USA"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..>1563
FT                   /codon_start=1
FT                   /gene="NIb"
FT                   /product="NIb replicase"
FT                   /function="RNA dependent RNA polymerase"
FT                   /db_xref="GOA:O93093"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:O93093"
FT                   /protein_id="AAC17473.1"
FT                   /translation="CKITETWLTECIQDNLQVVAKCPGQLVTKHVVKGPCPHFQLYLST
FT                   HDEAKAYFTPLLGKYDKSRLNRAAFIKDISKYAKPIYIGEINYDIFEKAIERVIRTLRD
FT                   VGMQQCTYVTDEEEIFKSLNLNAAVGALYTGKKKDYFADFSEEDKAEIVMRSCERLYNG
FT                   QLGIWNGSLKAEIRPIEKTMLNKTRTFTAAPLETLLGGKVCVDDFNNQFYSHHLEGPWT
FT                   VGITKFYGGWNRLLEKLPEGWIYCDADGSQFDSSLTPYLINAVLHIRLQFMEEWELGAQ
FT                   MLRNLYTEIVYTPIATPDGSVIKKFKGNNSGQPSTVVDNTLMVILAFNYAMLSSGIQDD
FT                   EIDNCCKMFANGDDLLLAVHPDYEHILDGFQTHFGNLGLNFEFNSRTKEKSNLWFMSTQ
FT                   GLKCEGIYIPKLEKDRIVAILEWDRSNLPEHRLEAICAAMVEAWGYPDLIHEIRKFYAW
FT                   LLEMQPFANLAKEGLAPYIAETALRNLYLGSGIKEEEIEKYFKQFAKDLPGYLEDYNEE
FT                   VFHQ"
XX
SQ   Sequence 1563 BP; 520 A; 311 C; 335 G; 397 T; 0 other;
     tgtaaaatca ctgagacttg gctcacggaa tgtatacaag ataatctcca agtcgttgca        60
     aaatgtcctg gccaacttgt gaccaagcat gtcgttaaag gtccatgtcc acatttccaa       120
     ctgtacctgt caacacatga tgaagctaaa gcatacttca ctcctttact tgggaaatat       180
     gataagagca gacttaatag agcggccttc attaaagata tctcaaaata tgcaaaacca       240
     atttatattg gcgagataaa ttacgatatc tttgaaaaag ctattgaacg agtgattcgc       300
     actctaagag acgtgggaat gcaacaatgc acatatgtca cagatgaaga ggaaattttc       360
     aaatcactca atcttaatgc agcagttgga gcactataca cagggaagaa aaaggattac       420
     ttcgcagatt tctcagaaga agacaaagca gaaatagtta tgagatcctg tgagcgctta       480
     tataatggac aactgggcat ttggaatgga tcgcttaaag ccgagatacg ccccatagaa       540
     aagaccatgt tgaacaaaac tcgcactttt acagcggcac cattggaaac tttacttggt       600
     ggaaaagtgt gcgttgatga tttcaacaat caattctatt cacatcatct agagggtcct       660
     tggacagttg gaatcacaaa attctatggt ggatggaatc gattactcga gaagttgcca       720
     gaaggatgga tttactgtga cgctgatggc tcacaatttg acagctccct aacaccatat       780
     ctcataaatg ccgtgctaca cattcgacta caatttatgg aggagtggga actgggcgca       840
     caaatgttac gaaatctgta cactgagatc gtctacacac caattgcaac accagacggt       900
     tccgtaatca agaaatttaa aggaaacaac agtggtcaac catcaactgt agtcgacaac       960
     acgctaatgg tcatcttagc attcaattat gcaatgttgt caagtggaat acaagatgat      1020
     gaaatcgaca actgttgcaa aatgtttgct aatggagatg atctactgtt ggcagtacat      1080
     cccgattacg aacatatact ggatggcttt caaacccact ttggaaacct tggtttgaat      1140
     tttgaattca attcacgaac gaaggaaaaa tcgaacttgt ggttcatgtc aacacaggga      1200
     ctcaagtgtg agggcattta tataccaaaa ctcgaaaagg acagaatagt cgccatactc      1260
     gagtgggatc gttcaaatct acccgagcac cgtctagaag ccatttgtgc agcaatggtt      1320
     gaagcgtggg gatatccaga cctcatacat gaaattcgga agttctacgc atggctgctg      1380
     gagatgcaac catttgcgaa tctagctaaa gagggtctgg ctccatatat tgcagaaaca      1440
     gcgcttcgta acttgtatct aggttcaggg atcaaggaag aggaaatcga aaaatacttc      1500
     aagcagtttg caaaggacct ccctgggtac ttagaggact acaacgaaga agtttttcac      1560
     caa                                                                    1563
//