ID   U84579; SV 1; linear; genomic DNA; STD; VRL; 1563 BP.
XX
AC   U84579;
XX
DT   29-MAY-1998 (Rel. 55, Created)
DT   29-MAY-1998 (Rel. 55, Last updated, Version 1)
XX
DE   Sugarcane mosaic virus NIb replicase (NIb) gene, partial cds.
XX
KW   .
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1563
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   "Sequence diversity in the coat protein coding region of sugarcane mosaic
RT   potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1563
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   ;
RL   Submitted (10-JAN-1997) to the INSDC.
RL   Center for Molecular Biotechnology, Queensland University of Technology,
RL   George St, Brisbane, Qld 4001, Australia
XX
DR   MD5; 312d4b8d5139369367e8d42c91be9c91.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1563
FT                   /organism="Sugarcane mosaic virus"
FT                   /strain="A"
FT                   /isolate="Florida, USA"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..>1563
FT                   /codon_start=1
FT                   /gene="NIb"
FT                   /product="NIb replicase"
FT                   /function="RNA dependent RNA polymerase"
FT                   /db_xref="GOA:Q9YNL4"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YNL4"
FT                   /protein_id="AAC17472.1"
FT                   /translation="CKITETWLTECLQDNLQVVAKCPGQLVTKHVVKGPCPHFQLYLST
FT                   HDEAKAYFTPLLGKYDKSRLNRAAFIKDISKYAKPIYIGEINYDVFEKAIERVIRILRD
FT                   VGMQQCTYVTDEEEIFKSLNLNAAVGALYTGKKKDYFADFSEEDKAEIVMRSCERLYNG
FT                   QLGIWNGSLKAEIRPIEKTMLNKTRTFTAAPLETLLGGKVCVDDFNNQFYSHHLEGPWT
FT                   VGITKFYGGWNRLLEKLPEGWIYCDADGSQFDSSLTPYLINAVLHIRLQFMEEWELGAQ
FT                   MLRNLYTEIVYTPIATPDGSIIKKFKGNNSGQPSTVVDNTLMVILAFNYAMLSSGIQDN
FT                   EIDNCCKMFANGDDLLLAVHPDYEHILDGFQTHFGNLGLNFEFNSRTREKSNLWFMSTQ
FT                   GLKCEGIYIPKLEKERIVAILEWDRSNLPEHRLEAICAAMVEAWGYSDLIHEIRKFYAW
FT                   LLEMQPFANLAKEGLAPYIAETALRNLYLGSGIKEEEIEKYFKQFAKDLPGYLEDYNEE
FT                   VFHQ"
XX
SQ   Sequence 1563 BP; 515 A; 303 C; 339 G; 406 T; 0 other;
     tgtaaaatca ctgagacttg gcttacggaa tgtttacaag acaatctcca agtcgttgca        60
     aaatgtcctg gccagcttgt gactaagcat gtcgttaaag gtccatgtcc acatttccaa       120
     ctgtacctgt caacacatga tgaagctaaa gcatatttta ctcctttact tgggaaatat       180
     gataagagca gacttaacag agcggccttc attaaagata tctcgaaata tgcaaaacca       240
     atttatattg gcgaaataaa ttacgatgtc tttgaaaaag ccattgaacg agtgattcgc       300
     attctcagag acgtgggaat gcagcagtgc acgtatgtca cagatgaaga ggagattttt       360
     aaatcactta atcttaatgc agcagttgga gcactataca cagggaagaa aaaggattac       420
     ttcgcagatt tttcagaaga agacaaagca gaaatagtta tgagatcctg tgaacgctta       480
     tataatggac aactgggcat ttggaatgga tcgctcaaag ccgagatacg ccccatagag       540
     aagaccatgc tgaataagac tcgcactttt acagcagcac cattggaaac cttgcttggt       600
     ggaaaagtgt gcgttgatga tttcaacaac caattctatt cacatcatct agaaggccct       660
     tggacggttg gaattacaaa attctatgga ggatggaatc gattgctcga gaagttgcca       720
     gagggatgga tttactgtga cgctgatggc tcacaatttg acagctccct aacaccatat       780
     ctcataaatg ccgtgctaca cattcgacta caatttatgg aggagtggga actaggcgca       840
     caaatgttac gaaatctgta caccgagata gtctacacac caattgcaac accggatggt       900
     tccataatca agaaatttaa aggaaacaac agtggtcaac catcaactgt agtcgacaac       960
     acgctaatgg tcatcttagc attcaattat gcgatgttgt cgagtggaat acaagacaat      1020
     gaaatcgaca actgttgcaa aatgtttgct aatggagatg atttactgtt ggcagtacac      1080
     cccgattatg aacatatact ggatggtttt cagacccact ttggaaacct cggtttaaat      1140
     tttgaattca attcacgaac gagagaaaaa tcgaacttgt ggttcatgtc aacacaggga      1200
     ctcaagtgtg aaggcattta cataccgaaa ctcgaaaagg aaagaatagt cgccatactc      1260
     gagtgggatc gttcaaatct acctgagcac cgtctagaag ccatttgtgc agcaatggtt      1320
     gaagcgtggg gctattcaga tctcatacat gaaattcgga aattttatgc atggcttctg      1380
     gaaatgcaac catttgcaaa tttagccaaa gagggtctag ctccatatat tgcagaaaca      1440
     gcgcttcgta acttgtatct aggttcaggg atcaaggaag aagaaatcga aaaatatttc      1500
     aagcagtttg caaaggacct ccctgggtat ctagaggatt acaacgagga agtttttcac      1560
     caa                                                                    1563
//