ID   U84578; SV 1; linear; genomic DNA; STD; VRL; 1563 BP.
XX
AC   U84578;
XX
DT   29-MAY-1998 (Rel. 55, Created)
DT   29-MAY-1998 (Rel. 55, Last updated, Version 1)
XX
DE   Sugarcane mosaic virus NIb replicase (NIb) gene, partial cds.
XX
KW   .
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1563
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   "Sequence diversity in the coat protein coding region of sugarcane mosaic
RT   potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1563
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   ;
RL   Submitted (10-JAN-1997) to the INSDC.
RL   Center for Molecular Biotechnology, Queensland University of Technology,
RL   George St, Brisbane, Qld 4001, Australia
XX
DR   MD5; 2c60194c43e9d233d83ce4fe290a7c45.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1563
FT                   /organism="Sugarcane mosaic virus"
FT                   /isolate="South Africa"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..>1563
FT                   /codon_start=1
FT                   /gene="NIb"
FT                   /product="NIb replicase"
FT                   /function="RNA dependent RNA polymerase"
FT                   /db_xref="GOA:O93092"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:O93092"
FT                   /protein_id="AAC17471.1"
FT                   /translation="CKITETWLTECIQDNLQVVAKCPGQLVTKHVVKGPCPHFQLYLST
FT                   HDEAKAYFTPLLGKYDKSRLNRAAFIKDISKYAKPIYIGEINYDVFEKAIERVIRTLRD
FT                   VGMQQCTYVTDEEEIFKSLNLNAAVGALYTGKKKDYFADFSEEDKAEIVMRSCERLYNG
FT                   QLGIWNGSLKAEIRPIEKTMLNKTRTFTAAPLETLLGGKVCVDDFNNQFYSHHLEGPWT
FT                   VGITKFYGGWNRLLEKLPEGWIYCDADGSQFDSSLTPYLINAVLHIRLQFMEEWELGEQ
FT                   MLRNLYTEIVYTPIATPDGSIIKKFKGNNSGQPSTVVDNTLMVILAFNYAMLSSGIKDN
FT                   EIDNCCKMFANGDDLLLAVHPDYEHILDGFQTHFGNLGLNFEFNSRTREKSNLWFMSTQ
FT                   GLKCEGIYIPKLEKERIVAILEWDRSNLPEHRLEAICAAMVEAWGYSDLIHEIRKFYAW
FT                   LLEMQPFANLAKEGLAPYIAETALRNLYLGSGIKEEEIEKYFKQFAKDLPGYLEDYNEE
FT                   VFHQ"
XX
SQ   Sequence 1563 BP; 522 A; 309 C; 335 G; 397 T; 0 other;
     tgcaaaatca ctgagacttg gctcacggag tgtatacaag ataatctcca ggttgttgca        60
     aaatgtcccg gccagcttgt aaccaagcat gtcgtcaaag gtccatgtcc acattttcaa       120
     ctgtacctat caacacatga tgaggccaaa gcatatttta ctcctttact tgggaaatat       180
     gataagagca gattaaacag agcggccttc attaaagaca tctcgaaata tgcaaaacca       240
     atttatattg gcgaaataaa ttacgatgtc tttgaaaaag ccattgaacg agtgattcgc       300
     actctcagag acgtgggaat gcaacaatgc acgtatgtca cagatgagga ggagattttt       360
     aaatcactca atcttaatgc agcagttgga gcactataca cagggaagaa aaaggattac       420
     ttcgcagatt tttcagaaga agacaaagcg gaaatagtta tgagatcctg tgaacgcttg       480
     tataatggac aactgggcat ttggaatgga tcgctcaaag ccgaaatacg ccccatagag       540
     aagaccatgt tgaacaagac tcgcactttt acagcagcac cattggaaac cttacttggt       600
     ggaaaagtgt gcgttgatga tttcaacaac caattctatt cacatcatct agagggtcct       660
     tggacggtcg gaattacaaa attctatgga ggatggaacc gattgctcga gaaattgcca       720
     gaaggatgga tttactgtga tgccgatggc tcacaatttg atagctccct aacaccatat       780
     ctcataaatg ccgtactaca cattcgacta caatttatgg aggagtggga actaggcgaa       840
     caaatgttac gaaatctgta cactgagatt gtttacacac caattgcaac accagacggt       900
     tccataatca agaaatttaa aggaaacaac agtggtcaac catcaactgt agtcgacaac       960
     acgctaatgg tcatcttagc attcaattat gcaatgttgt caagtggaat aaaagacaat      1020
     gaaatcgaca actgttgcaa aatgtttgct aatggagatg atctactgtt ggcagtgcat      1080
     cctgattatg aacatatact ggatggcttt caaacccatt ttggaaacct tggtttaaac      1140
     ttcgaattta attcacgaac gagggaaaaa tcgaacttgt ggttcatgtc aacacaggga      1200
     ctcaagtgtg agggcattta cataccaaaa ctcgaaaagg agagaatagt cgccatactc      1260
     gaatgggatc gttcaaatct acccgagcac cgtctagaag ccatttgtgc agcaatggtt      1320
     gaagcgtggg gctattcaga tctcatacat gaaattcgga aattttatgc atggcttctg      1380
     gaaatgcaac catttgcaaa tctagccaaa gagggtctag ctccatatat tgcagaaaca      1440
     gcgcttcgta acttgtatct aggttcaggg atcaaggaag aggaaatcga aaaatacttc      1500
     aagcagtttg caaaggacct ccccgggtat ctagaggatt acaacgaaga agttttccac      1560
     caa                                                                    1563
//