ID U75456; SV 1; linear; mRNA; STD; VRL; 1957 BP. XX AC U75456; XX DT 15-MAY-1998 (Rel. 55, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Sugarcane streak mosaic virus coat protein mRNA, partial cds. XX KW . XX OS Sugarcane streak mosaic virus OC Viruses; Riboviria; Potyviridae; Poacevirus. XX RN [1] RP 1-1957 RX DOI; 10.1006/mpev.1998.0535. RX PUBMED; 10051385. RA Hall J.S., Adams B., Parsons T.J., French R., Lane L.C., Jensen S.G.; RT "Molecular cloning, sequencing, and phylogenetic relationships of a new RT potyvirus: sugarcane streak mosaic virus, and a reevaluation of the RT classification of the potyviridae"; RL Mol. Phylogenet. Evol. 10(3):323-332(1998). XX RN [2] RP 1-1957 RA Hall J.S., Adams B., Parsons T.J., French R., Lane L., Jensen S.G.; RT ; RL Submitted (18-OCT-1996) to the INSDC. RL Plant Pathology, University of Nebraska-Lincoln, 427 Plant Science Hall, RL Lincoln, NE 68583, USA XX DR MD5; f957086144ef83d7603e524980262a41. XX FH Key Location/Qualifiers FH FT source 1..1957 FT /organism="Sugarcane streak mosaic virus" FT /mol_type="mRNA" FT /db_xref="taxon:53954" FT CDS <1..1767 FT /codon_start=1 FT /product="coat protein" FT /note="potyvirus polypeptide; NIb" FT /db_xref="GOA:O70681" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:O70681" FT /protein_id="AAC16271.1" FT /translation="VCVDDFNNKFYERQAGSHWTVGINKFNCGWDELARRFDHNWKFID FT ADGSRYDSSLTPLLFNCVLHIREHFMDLDEDEKRCLRNLYTQLVWTPVSTITGQIVKKC FT KGGPSGQPSTVVDNTLMLMIAVEYSKLRTEIRDNELNYTCNGDDLLLNAPPEVCAKIRE FT SFSETMKDLGLTYEFEAEVDNIGQVEYMSHKWLNACGMLIPKLSRERIMSILRWNRSFD FT LESQANKINAAWIESFGYADIMDFVHEYADWWSKHTGKEGFLMDIDKVTALYLTDEVRI FT DPVPTDLLVFHSGEEALIYHAAVGEQGTQPGLNQSTSASTVSSTSATTTSQAGSQTTGN FT LTNTVSQTMRSLYVPPLVKSLKTEAKAKQMMRYTPPQALISSSAASIRQFNDWANTAAE FT GYGKTIQQFTDEILPFWIYWCVVNGATEENKTKPKWTKAVLNLDGADGTEITVDENGPQ FT VEFEMGPMYRNAKPGIRAIMRHFGELAYKWVQFSVRSGKPIIPHNAVKAGLTTPEFYPC FT CIDFVMVNILSPAEIDVRNQVINARTPRMGKPLFRHALRAGGDEDTDLRREDDANYGRT FT QIGGAHFGRAQH" XX SQ Sequence 1957 BP; 581 A; 431 C; 490 G; 455 T; 0 other; gtgtgcgtgg atgatttcaa caacaaattt tatgagagac aagctgggtc acactggact 60 gttggaatca acaaattcaa ctgtggatgg gatgagctag cgagaaggtt tgaccacaac 120 tggaagttca ttgacgcgga cggctcaaga tacgacagtt cccttacacc actgcttttc 180 aattgtgtgc tacatatcag agaacatttc atggaccttg atgaagatga aaagcgctgt 240 ttgcggaact tgtacaccca gctcgtttgg actcccgtat caaccatcac aggccagatt 300 gtgaagaaat gtaaaggtgg gccatcagga caaccatcga cagttgtgga taacaccctt 360 atgcttatga ttgccgttga atactcaaaa ctcagaaccg agatcagaga caacgagctc 420 aactatacgt gtaacggaga tgatcttttg ctcaacgcac caccagaagt ctgtgctaaa 480 atacgtgaat cattttccga aactatgaaa gatcttggat taacgtacga gttcgaggct 540 gaagtggaca atattgggca agttgagtac atgtcgcaca agtggctgaa cgcctgtggg 600 atgctaattc caaagttgtc acgagaacgg attatgagca ttctacgatg gaatcgatcc 660 tttgatcttg agagtcaagc gaacaagata aatgcagcat ggatagaatc atttgggtac 720 gccgacatca tggacttcgt acacgaatac gctgactggt ggagtaagca tacagggaaa 780 gaggggttcc tcatggacat cgacaaggtc acagctctct atctcacaga tgaagtaaga 840 attgaccctg tgccaacaga cttgcttgtg ttccattcag gagaagaagc cttaatttat 900 cacgctgctg ttggggaaca aggaacacaa cccggattga accagagcac ttcggcttct 960 acggtgtcga gcacatcagc taccacaaca agtcaagcag gaagtcaaac aacagggaac 1020 ttaaccaaca cagtttcaca aacgatgagg tctctatacg taccaccact ggttaagtca 1080 ctcaaaacgg aggccaaggc aaagcagatg atgaggtaca caccaccaca ggcacttata 1140 tcttcatcgg ccgcatcaat acggcagttc aatgattggg caaacacagc ggctgaaggg 1200 tatggaaaaa caattcaaca gttcacggat gagatactcc ccttttggat ctattggtgt 1260 gttgtcaacg gtgcaactga agagaacaag acaaagccaa agtggacgaa agctgtgttg 1320 aatctagatg gagcagatgg cacagagatt accgtggatg aaaacggacc ccaagtggag 1380 tttgaaatgg ggccgatgta cagaaacgcc aaacctggta ttcgcgcgat tatgagacat 1440 tttggcgaat tggcgtacaa gtgggttcag ttctcggttc gtagcgggaa acccataata 1500 ccacacaatg cagtgaaggc aggattgaca acaccagagt tttatccttg ctgcattgat 1560 ttcgtgatgg tgaacatcct ctcaccagca gaaatcgacg tgcgtaacca ggtaattaac 1620 gcacgcacac cccggatggg aaagccttta ttccgtcatg ctcttagagc cgggggagat 1680 gaggacacgg acctgcgtag ggaagatgat gcaaactatg gaaggacgca gatcggtggc 1740 gctcattttg ggcgcgccca gcactgattt tcagtgcagt tatccatata ttatcgtatc 1800 tacgtatcaa ttggttctct tggataggct gatggtagtt gcctgaccgc ttagtcgatc 1860 atcaggagct actagtggat cattcggaga ttgctcaccc tgtttccaga ccagtgagat 1920 tctgccgaac ccacaatcaa cctgcccagt gaggagg 1957 //