ID U75379; SV 1; linear; genomic RNA; STD; VRL; 4880 BP. XX AC U75379; XX DT 04-FEB-1997 (Rel. 50, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 2) XX DE Watermelon spotted wilt virus nonstructural protein (NSm) and glycoprotein DE precursor genes, complete cds. XX KW . XX OS Orthotospovirus citrullomaculosi OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4880 RA Chu F.-H., Yeh S.-D.; RT "Comparison of replication forms and ambisense M RNA of watermelon silver RT mottle virus with other tospoviruses"; RL Unpublished. XX RN [2] RP 1-4880 RA Chu F.-H., Yeh S.-D.; RT ; RL Submitted (18-OCT-1996) to the INSDC. RL Department of Plant Pathology, National Chung Hsing University, 250 RL Kuo-Kuang Road, Taichung City, Taiwan, ROC XX DR MD5; 273b60c27a2fac58258fde69a3ba4f5d. XX FH Key Location/Qualifiers FH FT source 1..4880 FT /organism="Orthotospovirus citrullomaculosi" FT /chromosome="M RNA" FT /isolate="Taiwan" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052571" FT 5'UTR 1..55 FT CDS 56..994 FT /codon_start=1 FT /gene="NSm" FT /product="nonstructural protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:P89251" FT /protein_id="AAB41722.1" FT /translation="MYRLSNVLKPFRLSNNTNKEMVPAVKTENNKSIIVRNVSKKDIDE FT AIMNKVKTANGKQYVSGIDSSILGTYSSELDTGESDVGDSSDDILSRLVVEQSTHLSNW FT KNDSLVGNGNDKVSFTISIMPTWNSGRRFMHISRLILWVVPTIPDSKNSIKVTLLDQNK FT MTREEKIILSRQTSLKDPLCFIFHLNWSFPKERNTPKQCMQLNLTSDEKYAKGVSFASV FT MYSWVKNFCDTPIASESNTCDVIPINRAKVIKSAALIEACKLMIPKGIGGKQLSNQIRA FT LQKAAEKYAMEAENDADVIDVDIEMDNLLEI" FT misc_feature 995..1467 FT /note="intergenic region" FT CDS complement(1468..4833) FT /codon_start=1 FT /product="glycoprotein precursor" FT /db_xref="GOA:P89252" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:P89252" FT /protein_id="AAB41723.1" FT /translation="MKKYYLLVYCLGLASLLFVPDVYLLNQVDDSVQLKRIQDRYRVDD FT PEDLIEKEEPTTIRVTRLKEEKLSRILRNDGSTTQSPVLELSCDNFEKRHCVIKGVSEF FT NAHYQIDTGDKIISCINNSANIFDICQYEKEFKKIKFKNFPVVPVLKLENKRVLEVGTK FT FFFVDKSNNPINIDPKVDLKSPTVARLSVRLSGDCKINQVSMSSPYQIKLRSEENIGLL FT IKDVKNSKPANIKSITGDSTINFKPEELDGNHFLLCGDKSSLIAKVDIPVRNCVSKYSE FT EPKKIFFCTNFSYFKWIFVFLMITFPVSWLIWKTKDALSIWYDVMGIVTYPILWVINWS FT WPYFPLKCGICGCFSFLTHSCSEKCVCNQSKASRGHSEECYLSTRDKFEWRKLTLIQQF FT QFIINTKLSSNFLVFVTKMILASILISYIPSSIALKQNNLCVEKCYYNLNLDSLTTDKF FT GTMGNGYETCECSIGNVITETVYRSGVPMSRATSLNDCVLGSDLCMVSNNQAQNLFACR FT NGCNSLESIKNIPNIKFNKFYKGHSFKGNLTSLKIANRLREGYMDSFTESKILEEESAK FT EYKFYKSLKADDVPPRNLMPRQSLVFSTEVDGKYRYLLEMDIKSNTGSIYLLNDDAMHS FT PMEFIIYVKSVGVEYDVRYKYSTAKIDTTVADYLVTCTGNCADCRKQNPKVGSLDFCVT FT PTSWWGCEELGCLAINEGSICGHCTSIYDLSSLVNIYQVVESHVTAEICIKSLDGYSCK FT RHSDRSPIQTDYYQLDMSVDLHNDYMSTDKLFAVTKQQKILTGNIADLGDFSGSSFGHP FT QITIDGIPLSVPSTLSQNEFTWSCSAVGDKKVNIRQCGLYTYSAIYVLSPSKDISHLDE FT SKNKLYMEKDFLVGKLKMVIDMPKEMFKKIPTKPVLSEAKMVCSGCSKCAIGIDCNITY FT TSDTTFSARLMMDTCSFKSDQIGTFLGPNEKSIKAYCYEEITDKSLKLIPEDQQELTVD FT IQVDEFIQVDRDTIIHFDDKSAHDENKHHSDTSISSLWDWIKAPFNWVASFFGSFFDLV FT RVILVIMAVCVGVYIVSSIFKLSRTYYVDKRRQKLEDAMESVESSILLTNFTRTDQTRK FT RKSPPKGYDLCLDI" FT 3'UTR 4834..4880 XX SQ Sequence 4880 BP; 1541 A; 866 C; 839 G; 1634 T; 0 other; agagcaatcg gtgcgccaat tactagttaa atcatcaaat aattaacaag aaataatgta 60 tcgcttgtct aatgtcttaa aacctttccg tctttcgaat aacacaaata aagagatggt 120 ccctgctgtg aaaacggaaa acaacaagag cattatagtt agaaatgtct ctaaaaagga 180 catagatgag gctataatga acaaagttaa gacagcaaat gggaaacaat atgtttctgg 240 catagattct agtatcttgg gaacctactc cagtgaatta gatacaggtg agtcagatgt 300 aggagacagt tcagatgata ttttatccag acttgtagtt gaacaaagca cccacttgag 360 caattggaaa aatgactctc ttgttggtaa tggaaatgac aaagtcagtt tcactataag 420 cataatgcct acatggaata gtgggaggag attcatgcat atatctagac tcatattgtg 480 ggttgtccca actattcccg attcaaagaa cagcatcaag gtcactctac tcgatcaaaa 540 caaaatgact cgtgaagaga agataatttt gagcaggcaa acatctttaa aagatccttt 600 gtgcttcatt ttccacttga attggtcttt ccctaaagaa aggaatacac ctaagcagtg 660 catgcaactt aacctgacaa gtgatgaaaa gtatgctaaa ggggtaagct ttgcatcagt 720 tatgtattcc tgggtaaaaa acttctgtga tactcctatt gcatcagaaa gtaatacttg 780 tgatgtgata ccaataaata gagctaaggt aattaaatct gctgctttga ttgaagcatg 840 taagctaatg ataccaaagg gaattggagg gaagcaacta tcgaaccaaa ttagagctct 900 acaaaaggct gcagaaaaat atgcaatgga agcagagaat gatgcagatg tcattgatgt 960 ggatatagaa atggataacc ttcttgaaat ttaaatcgta agcaaatgat ttaggctatt 1020 taaatattaa tttgtgtttg aatttagatt taaacataat taaatctatt ttcttgtgtg 1080 cttatgagtc agtattttat attttgtcat ttgtctctat gtatgtctag aatatgtata 1140 gttgtatgca attttaataa taataaataa atacataaaa acaacaaaaa atatgcaaaa 1200 atcaaaaaca aaaaatatat atatatataa aataaaaata aaataataac taactattat 1260 ataattaaat aaggctacgg ccaagtgttg gcttttcagc ctttttttgc tattttttaa 1320 ttttctagtt tttttgttta tttgttttta tcatagtttt atttgtttca tttattattt 1380 tactcatcta cttacttatc tgactttttc atgctgtgta gctgagcgca atttattttc 1440 gaaatttgag ttacagataa gacacgttta tatatctaaa cacaaatcat agcctttcgg 1500 aggagatttc ctcttcctgg tctgatcagt tcttgtaaag ttagtcaata aaatgcttga 1560 ttcaacagac tccatagcat cttctaattt ctgccttctt ttatctacgt agtatgttct 1620 agataatttg aatatgctgc tcacaatata tacacccaca cacacagcca tgatcactaa 1680 aattactcta actaaatcaa agaaactacc gaagaaagaa gctacccaat taaaaggtgc 1740 tttgatccag tcccacaagc tagaaatgga agtgtcagaa tggtgcttgt tttcatcatg 1800 tgcacttttg tcatcaaagt gaattattgt gtctcgatca acctgaatga actcatctac 1860 ttgtatgtct actgtaagtt cttgttgatc ttcagggatg agtttaagag atttgtctgt 1920 aatctcttca tagcaataag ctttgatgct tttctcattt ggacccaaga atgttcctat 1980 ttgatcagat ttaaaagagc aggtgtccat catcagcctt gcagagaatg ttgtgtctga 2040 cgtataagtt atattgcaat caatccctat agcacatttt gagcatccag agcacaccat 2100 tttagcctct gaaaggacag gtttggttgg tatttttttg aacatttctt tgggcatatc 2160 tataaccatt ttaagcttac cgactaaaaa atccttctcc atatacagct tatttttgga 2220 ttcatctaga tgtgatatgt cttttgatgg agataaaaca taaatagcac tgtatgtgta 2280 cagtccgcat tgccttatgt taactttttt gtctcctaca gcactgcaac tccatgtaaa 2340 ctcattttga gataaagtgg atggaactga taacgggatg ccatctatag ttatctgcgg 2400 atgaccaaat gatgatcctg aaaaatcacc caaatcagca atattccctg tgagaatttt 2460 ctgctgtttc gtgacagcaa ataacttatc agtactcata taatcattgt gtagatccac 2520 tgacatgtca agttgataat aatctgtttg aataggtgac ctatcagaat gtctcttgca 2580 agaataacca tctaatgatt ttatacaaat ttccgcagta acatgacttt ccacaacctg 2640 gtaaatgttg actagacttg ataaatcata aatgcttgtg caatggccac agatggatcc 2700 ttcattgatt gctaaacagc caagctcttc acatccccac caagaagttg gggtaacgca 2760 aaaatctaac gatcctactt tagggttttg ctttctacag tctgcacaat tgcctgtgca 2820 tgtgaccaaa taatctgcta ctgttgtatc aatttttgcc gttgagtact tgtatcttac 2880 atcatattca acaccaacac tttttacata aattatgaat tccattgggg agtgcatagc 2940 atcatcgtta agcaaatata tcgatcctgt gttagattta atgtccattt ctaaaagata 3000 tctatatttc ccatcaacct ctgttgaaaa tactaaagat tgcctaggca tcaaatttct 3060 aggtggaaca tcatctgctt ttaaactctt ataaaatttg tattccttgg cagattcttc 3120 ttctaggatc tttgattcag taaagctgtc catatatcct tctctcaatc tgttggctat 3180 ctttaaactg gttaagttgc ctttaaaaga atgacctttg taaaacttgt tgaatttaat 3240 atttggtatg ttttttatgg actcaaggga gttacagcca tttctgcatg caaacaagtt 3300 ttgagcttga ttgttgctca ccatacacag atctgagcct aaaacacaat cgtttagcga 3360 tgttgctctg gacatgggta caccagatct gtacaccgtt tcagtaataa cattccctat 3420 tgaacactcg catgtttcat acccattacc cattgttcca aacttgtctg ttgtcaaaga 3480 atctaaattc aaattgtaat aacatttttc cacgcacaag ttgttctgtt tgagtgcaat 3540 acttgacggt atgtaagaga taagaattga tgccagaatc atttttgtta caaaaaccag 3600 aaaattgcta cttaacttgg tgtttattat aaactgaaat tgctggatca aagtcaattt 3660 gcgccattca aatttatctc tggtggatag atagcattct tcagaatgac ctctagatgc 3720 tttgctttga ttacaaacac acttttcaga gcaagaatga gttaagaagg agaagcatcc 3780 acagatccca cattttagag ggaaatatgg ccatgaccaa ttaatgaccc aaaggatagg 3840 gtatgtcaca atgcccatta catcgtacca gatacttaat gcatctttag tcttccagat 3900 cagccatgac acaggaaaag tgatcattaa gaatacaaag atccatttaa aataagagaa 3960 gtttgtgcag aagaaaatct ttttgggctc ttctgaatat ttagatacac agtttctaac 4020 tgggatgtct acttttgcaa ttaaactgga cttatctcca caaagtaaaa agtggttacc 4080 atctagttct tcaggtttaa agtttattgt tgagtcacca gtaattgatt ttatgtttgc 4140 aggtttagag ttctttacat cctttatcag caaccctatg ttctcttctg atctcaattt 4200 aatttggtaa ggagatgaca tagatacttg atttatcttg caatcaccag acaaccttac 4260 agaaagtctt gctacagttg gggacttcag atccaccttc gggtcaatgt tgatcgggtt 4320 gtttgattta tcaacgaaga aaaattttgt tcccacttca agaactcttt tgttttccag 4380 tttcagaaca gggaccactg ggaaattttt gaacttgatt ttcttgaatt ctttttcata 4440 ctggcaaata tcaaatatat tagcagaatt gttaatgcat gagataattt tatcaccggt 4500 atctatttgg taatgggcat tgaactcgct cacacctttg atgacacagt gtcttttttc 4560 aaaattgtca caacttaatt ctaggacagg agactgtgtt gtgctcccat cgtttcttaa 4620 gatccgtgac aatttctctt ccttgagtct agttactctg attgttgtgg gttcctcttt 4680 ctcaatgagg tcttcagggt cgtctactct gtatctatct tggattcttt ttaactggac 4740 actgtcatcc acctggttca aaaggtagac atcagggacg aacaaaagcg aagccagacc 4800 tagacagtag acaagtagat agtatttctt cattcttaaa aggttctttg agagtattta 4860 attgttgcac tgattgctct 4880 //