ID U73201; SV 1; linear; genomic RNA; STD; VRL; 4422 BP. XX AC U73201; XX DT 13-NOV-1996 (Rel. 49, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 2) XX DE Rice dwarf virus segment 1 RNA-dependent RNA polymerase gene, complete cds. XX KW . XX OS Rice dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-4422 RX DOI; 10.1016/0042-6822(92)91210-L. RX PUBMED; 1529532. RA Suzuki N., Tanimura M., Watanabe Y., Kusano T., Kitagawa Y., Suda N., RA Kudo H., Uyeda I., Shikata E.; RT "Molecular analysis of rice dwarf phytoreovirus segment S1: interviral RT homology of the putative RNA-dependent RNA polymerase between plant- and RT animal-infecting reoviruses"; RL Virology 190(1):240-247(1992). XX RN [2] RP 1-4422 RA Xiao J., Li Y., Chen Z.; RT "Necleotide and Protein Sequence Analysis of Rice Dwarf Virus Replicase RT (Segment S1)"; RL Unpublished. XX RN [3] RP 1-4422 RA Xiao J., Li Y., Chen Z.; RT ; RL Submitted (03-OCT-1996) to the INSDC. RL College of Life Sciences, Peking University, Beijing 100871, China XX DR MD5; 297d3ab44a2af15875974c396ea9daa3. XX FH Key Location/Qualifiers FH FT source 1..4422 FT /organism="Rice dwarf virus" FT /chromosome="segment 1" FT /strain="Chinese strain" FT /mol_type="genomic RNA" FT /note="RDV" FT /db_xref="taxon:10991" FT CDS 36..4370 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q98631" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR014383" FT /db_xref="UniProtKB/Swiss-Prot:Q98631" FT /protein_id="AAB18743.1" FT /translation="MDLARSDIIPHLLCLFQEIIQANIQKVSEAYDLELKIMNILTLWR FT NGSDNLISDNDDYMKKGLFFSRSNDPLALQARYARMYDDLFKLNNYEVPDDVVRRHDNK FT ILDIILKESSVPFWYDISDDEAHESMLPEFRLQDIHEFRLNLKRVRVVPDESEEIQMDE FT SQSDKRRRKKRMEKSRPVWLSGSESDRRIELNDSLKPSQKFETKLSSYLLNRLMNEMNP FT HYCGHPLPALFVTLIMLKAYSIKNKFFSYGIRYMELVCNEIAGPDLNTRTFPVLFGSDG FT SFVGTRVYSHYPIKLRMILNDLTYLLTYSDLHKFQEFELDVNDEVLLHMLRTPNDGRQL FT KKAVTRLNHYYGLKFNPKTTDCGVVNGMDFTHKHPITKTADFTSPVLPMTNSFNKAEIC FT YGHNSKILNRAVFTDTVRGHIREDLKNVADLDLPKLYEHVSKLVDMRVNYTIIYDLMFL FT RVMLNLGGYSRSNQITDFRKTIDEITKMNEGFLSGADPEKNIDTLNAWMAPTMEDCGYR FT LTKSILFGKFRKAKYPSDLEAKSNIDYYVTARSAGIGNLRISIETDKRKYKVRTTSKSA FT FVNAMGSGILDVNPVSNEPMMLTDYLLTQTPETRANLEAAIDSGSKSDSELMRILGQNS FT IGSRSTTAWRPVRPIYINVLQAHLAQAFIIGPHINATVNQHEYQPTSLWFTGDDLGVGF FT ATLYQSGTADIIVPAIEASSTGKALSVLADCSSWDQTYLTATMIPYYNGIKRALLEYQQ FT ADMRNFYMIDSGRTGVPGMKLSEIVDWFNSFQTKRIFNASYLKERHSFVVKYMWSGRLD FT TFFMNSVQNALITRRIAEEVSLRVSNTGLSWFQVAGDDAIMVYDGSSISTTEQVTRINE FT ITVRNYEESNHIINPQKTVISHISGEYAKIYYYAGMHFRDPSIQLHESEKDSGASDVTE FT SLREFGQVIYEYNKRAIGTLRVNALYGRLIAGLAYSVNCPQYDASKRTYANMKYYPPPT FT SVIAPAAFKGGLGLSFTGLSLNEVLFIKLHLHEAVSQGLHVISMISFEANEVVSNSLSA FT YYLKDQKDLLRDMKLGKHLEKVKGISFKSSDLAFSGSDFSQGLNLKRESIDKVKLEVSR FT KSIRDLRSSGISVPSTHAYENLPYASLHQSFKSLKVDRDTSKFTNERLLVSLLEYKSDI FT PRVSVTSQYPVYDLINISKVDELNVRSGGPVRFISAPIEGKLLEENIGTRQGVQFKNRG FT YGGSQEVLHFIRSNGLVITEQALIDLIIKSGVLLMINPQRGLIDLFQSLSGDTASSMHL FT ANFFMAEKPHWEDNAISLTIAGSLLENCDSRIENVKNFVSVLATGMQKDLQRMFYYVGF FT VYYAQRLIWSGGHSSKIFVSIDEDKLADFLRGSKPITRRRKAMAGTKREPINLSANFSY FT EISEPDREISEYDPLILCHPLSMPFFGNWQEKYSVMQSDEQM" XX SQ Sequence 4422 BP; 1321 A; 852 C; 994 G; 1255 T; 0 other; ggcaaatgat cggctgtgcc tggacttgat tcgtcatgga tcttgcgagg tcggatatca 60 ttccgcattt gctatgcctc ttccaagaga taatccaagc caacatccaa aaagtatctg 120 aggcgtacga tttggagttg aaaataatga acattttgac gttgtggcga aatggatctg 180 acaatctgat ttcagacaac gatgattaca tgaaaaaggg actattcttc agtaggagta 240 atgatccctt agctttacag gctcgttatg ctcgaatgta cgatgatctg tttaagctaa 300 acaactatga agtgccagat gatgttgtgc gtaggcatga caacaagatt ttagacataa 360 tattaaaaga gtcttccgtg ccattctggt atgacatatc ggatgacgaa gctcatgaat 420 caatgctgcc tgaattcaga ctgcaagaca ttcacgagtt cagattgaat ttgaagcgcg 480 tacgcgtagt acctgacgag tctgaagaga ttcagatgga tgaaagtcag agtgataagc 540 ggcgtcgcaa gaagaggatg gagaagagtc gtcctgtgtg gctgtcggga tcggaaagcg 600 acaggcgtat agaattgaac gactctttga aacccagtca aaaatttgaa accaagttat 660 cgtcttattt attaaataga ttaatgaatg agatgaatcc tcattattgt gggcatccgt 720 taccagcatt atttgtcaca ctcataatgc taaaggctta ttctattaag aacaagttct 780 tttcatatgg tataagatat atggagctcg tgtgtaatga gatcgctggt ccggatctca 840 atacccgaac gttcccagtt ttatttggaa gtgacggttc attcgtgggc acacgagtat 900 attcgcacta tccaataaag ctacgtatga tactgaacga cttaacttat ttattaacct 960 actcagatct tcataagttc caagaattcg agctagatgt aaatgatgag gttctacttc 1020 acatgttgcg cacgccgaat gatgggaggc aacttaagaa ggcggtgaca aggttaaatc 1080 actattatgg attgaagttc aatccgaaga ccaccgactg cggtgtggtc aatggaatgg 1140 atttcacgca taagcatccg atcactaaga ccgctgactt tacgtcccca gtcttaccca 1200 tgactaattc tttcaataag gctgaaatat gttatgggca taacagtaaa attttgaaca 1260 gggccgtgtt taccgacacc gtccgtggcc atattcgcga ggaccttaag aatgtggctg 1320 acttagactt gccaaaactg tatgagcatg tttctaaact agtggatatg cgtgttaatt 1380 acacaattat ctatgatctc atgtttctac gagtcatgtt gaatcttggt ggctattcta 1440 gatccaatca aatcactgac tttagaaaga ccattgatga gatcacgaaa atgaatgaag 1500 gtttcttatc tggggcggat ccagaaaaga atattgacac attgaatgct tggatggcgc 1560 ctacaatgga ggattgtggt tatcgactta ctaagtctat cttgttcggt aaatttagga 1620 aagccaaata cccatctgat ttggaagcta agtccaatat tgattattac gtaactgcta 1680 gatcggctgg gattggcaac ctacgtatat caatagaaac agataaaaga aagtacaaag 1740 tacggactac atcgaagtcc gcctttgtta acgccatggg ttctggaata cttgatgtta 1800 atcccgtcag taatgaacct atgatgttaa ccgattactt gttaacgcaa actcccgaaa 1860 cgcgagcaaa tttagaggcg gctatagata gcggatctaa atccgactct gaattaatgc 1920 gcatactagg gcagaacagc atcggctcac gttctaccac agcttggaga ccggtacgac 1980 cgatttacat aaatgtattg caagcgcatt tggcgcaggc tttcattatc gggcctcaca 2040 taaatgcaac tgttaatcag catgaatacc aacctacatc tctttggttc actggagatg 2100 atctaggggt tgggtttgct acactgtatc aaagcggaac cgcggatata atcgttccag 2160 ctatcgaagc gtcctctact ggtaaagcgc tcagcgttct cgctgattgc tcatcctggg 2220 atcagacgta tctgacggcg acgatgattc cgtactataa tggaataaaa agagctttgc 2280 tggaatacca acaagcggat atgcgcaact tctatatgat agatagtggc agaactggcg 2340 tgccagggat gaaactgtct gaaatagtag attggtttaa tagttttcaa accaagcgga 2400 tattcaatgc ctcctatttg aaggaaaggc attcatttgt ggttaagtat atgtggtcgg 2460 gacgactgga cactttcttt atgaattccg tccagaatgc attgatcacc aggagaatag 2520 ctgaagaagt atctttgagg gtgtcaaaca ctggcttatc ctggtttcag gttgctggcg 2580 atgacgccat catggtatac gatggatcat caatctccac aactgagcaa gtcactagaa 2640 ttaatgaaat cacggttcgt aattatgagg agtcaaatca cataattaat ccgcaaaaaa 2700 cggtaatttc acatatttct ggtgagtatg ctaaaatata ttattatgca ggaatgcatt 2760 ttcgcgatcc ttcgattcag ctgcatgaat ctgaaaagga ttctggagca agtgacgtca 2820 ccgagtccct aagggagttt ggtcaagtca tatatgaata taacaaaaga gcgattggta 2880 ccctacgcgt gaacgcttta tatggtaggc taatagccgg gctagcatat agtgtaaact 2940 gtccgcagta tgacgcttca aaaagaacat atgcgaatat gaaatattat ccgccaccaa 3000 cctcagtaat tgctccagcc gcatttaagg gaggattggg attgtcattt actgggttat 3060 cgttgaatga ggtgctattt ataaaattgc atcttcatga agcggtatct cagggtcttc 3120 acgtgatttc aatgatttca tttgaagcca atgaagtcgt ttcaaactct ctgtccgcgt 3180 attatcttaa ggaccagaaa gatttactgc gtgacatgaa gttaggcaag catcttgaaa 3240 aagttaaagg tatatccttt aaatcctctg atttagcctt ttcgggtagt gatttctcgc 3300 aagggctaaa cctgaagagg gaatctattg ataaagtgaa gcttgaagtg tctcgcaaat 3360 ctatccgtga tttgcgctct tcgggtatta gtgtgccatc aacgcacgca tatgaaaatc 3420 tgccatatgc atcactgcat cagtctttca aaagtttaaa agtggataga gacacttcga 3480 aatttacgaa tgaacggcta ctggtttcac tccttgagta taaatcagac attcctagag 3540 taagtgttac ttcgcagtat ccagtttatg acttgatcaa catctcaaaa gttgacgaat 3600 taaatgttag atctggtgga ccagtcaggt tcatctctgc tccaatagaa ggtaagctat 3660 tggaagaaaa tattggtacc cgtcaaggag ttcagtttaa aaaccgaggg tacggaggat 3720 cccaagaagt attacacttc ataagatcca acggcttggt gataactgaa caggctctga 3780 ttgacttaat cattaagtca ggagtattgc taatgataaa tccacaacgt gggttgattg 3840 acctttttca gtccctttct ggagataccg cttcatccat gcatctagcg aacttcttca 3900 tggctgaaaa gccgcactgg gaagataatg ccatatctct caccattgcg gggtcattgc 3960 ttgagaactg cgatagtaga attgagaacg taaagaattt tgtcagcgtc cttgctactg 4020 gcatgcaaaa ggacctacag aggatgttct attacgtcgg atttgtctac tatgcacaga 4080 ggcttatatg gtctggtggt cactccagta aaatattcgt ctccattgat gaggataagc 4140 tcgctgactt ccttagagga tctaaaccaa tcactcggag gaggaaagcc atggctggaa 4200 ctaagcgtga accgatcaat ttaagcgcta atttcagtta tgaaatatct gaaccggata 4260 gggagattag tgagtacgac ccactaatct tatgtcatcc cctatcaatg ccattttttg 4320 gtaattggca ggagaaatac tctgtgatgc agagcgacga gcaaatgtga ttgatcgcca 4380 ggctatccgt tgggataggt taatcagccg atcatatatg at 4422 //