ID   U66094; SV 1; linear; genomic RNA; STD; VRL; 2216 BP.
XX
AC   U66094;
XX
DT   02-SEP-1996 (Rel. 49, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Cucumber mosaic virus capsid protein and 3a protein genes, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2216
RA   Gal-On A., Kaplan I., Palukaitis P.;
RT   "Characterization of cucumber mosaic virus II. Identification of movement
RT   protein sequences that infuence accumulation and systemic infection in
RT   tobacco";
RL   Unpublished.
XX
RN   [2]
RP   1-2216
RA   Gal-On A.;
RT   ;
RL   Submitted (05-AUG-1996) to the INSDC.
RL   Volcani center A.R.O, Plant Virology, Bet-Dgan, 50250, Israel
XX
DR   MD5; ba9ee205d2dc37ef6dcd8f7a2b6b97f8.
DR   EuropePMC; PMC110906; 11044076.
DR   EuropePMC; PMC112760; 10400773.
DR   EuropePMC; PMC3550809; 23730005.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2216
FT                   /organism="Cucumber mosaic virus"
FT                   /chromosome="RNA 3"
FT                   /host="Cucurbita pepo"
FT                   /strain="Sny"
FT                   /mol_type="genomic RNA"
FT                   /clone="pSny309"
FT                   /db_xref="taxon:12305"
FT   CDS             120..959
FT                   /codon_start=1
FT                   /product="3a protein"
FT                   /function="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q96709"
FT                   /protein_id="AAB07136.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADKAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGFTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKFNQNARSESEDLNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1257..1913
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q96710"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q96710"
FT                   /protein_id="AAB07137.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKVDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2216 BP; 515 A; 523 C; 528 G; 650 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgttgtc cgcacatttg        60
     agtcgtgctg tccgcacata ttttattttc tgtttacagt gtgttagatt tcccgaggca       120
     tggctttcca aggtaccagt aggactttaa ctcaacagtc ctcagcggct acgtctgacg       180
     atcttcaaaa gatattattt agccctgaag ccattaagaa aatggctact gagtgtgacc       240
     taggccggca tcattggatg cgcgctgata aggctatttc agtccggccc ctcgttcccg       300
     aagtaaccca cggtcgtatt gcttctttct ttaagtctgg atatgatgtt ggtgaattat       360
     gctcaaaagg atacatgagt gtccctcaag tgttatgtgc tgttactcga acagtttcca       420
     ctgatgctga agggtctttg agaatttact tagctgatct aggcgacaag gagttatctc       480
     ccatagatgg gcaatgcgtt tcgttacata accatgatct tcccgctttg gtgtctttcc       540
     aaccgacgta tgattgtcct atggaaacag ttgggaatcg taagcggtgt tttgctgtcg       600
     ttatcgaaag acatggttac attgggttta ccggtaccac agctagcgtg tgtagtaatt       660
     ggcaagcaag gttttcatct aagaataaca actacactca tatcgcagct gggaagactc       720
     tagtactgcc tttcaacaga ttagctgagc aaacaaaacc gtcagctgtc gctcgcctgt       780
     tgaagtcgca attgaacaac attgaatctt cgcaatattt gttaacgaat gcgaagttta       840
     atcaaaatgc gcgcagtgag tccgaggatt taaatgttga gagccctccc gccgcaatcg       900
     ggagttcttc cgcgtcccgc tccgaagcct tcagaccgca ggtggttaac ggtctttagc       960
     actttggtgc gtattagtat ataagtattt gtgagtctgt acataatact atatctatag      1020
     tgtcctgtgt gagttgatac agtagacatc tgtgacgcga tgccgtgttg agaagggaac      1080
     acatctggtt ttagtaagcc tacatcatag ttttgaggtt caattcctct tactccctgt      1140
     tgagcccctt actttctcat ggatgcttcc ccgcgagatt gcgttattgt ctactgacta      1200
     tatagagagt gtgtgtgctg tgttttctct tttgtgtcgt agaattgagt cgagtcatgg      1260
     acaaatctga atcaaccagt gctggtcgta accgtcgacg tcgtccgcgt cgtggttccc      1320
     gctccgcccc ctcctccgcg gatgctaact ttagagtctt gtcgcagcag ctttcgcgac      1380
     ttaataagac gttagcagct ggtcgtccaa ctattaacca cccaaccttt gtagggagtg      1440
     aacgctgtag acctgggtac acgttcacat ctattaccct aaagccacca aaagtagacc      1500
     gtgggtctta ttacggtaaa aggttgttac tacctgattc agtcacggaa tatgataaga      1560
     agcttgtttc gcgcattcaa attcgagtta atcctttgcc gaaatttgat tctaccgtgt      1620
     gggtgacagt ccgtaaagtt cctgcctcct cggacttatc cgttgccgcc atctctgcta      1680
     tgttcgcgga cggagcctca ccggtactgg tttatcagta tgccgcatct ggagtccaag      1740
     ccaacaacaa actgttgtat gatctttcgg cgatgcgcgc tgatataggt gacatgagaa      1800
     agtacgccgt cctcgtgtat tcaaaagacg atgcgctcga gacggacgag ctagtacttc      1860
     atgttgacat cgagcaccaa cgcattccca catctggagt gctcccagtc tgatttcgtg      1920
     ttcccagaat cctccctccg atctctgtgg cgggacgtga gttggcagtt ctgctataaa      1980
     ctgtctgaag tcactaaacg ttttttacgg tgaacgggtt gtccatccag cttacggcta      2040
     aaatggtcag tcgtggagaa atccacgcca gcagatttac aaatctctga ggcgcctttg      2100
     aaaccatctc ctaggtttct tcggaaggac ttcggtccgt gtacctctag cacaacgtgc      2160
     tagtttcagg gtacgggtgc ccccccactt tcgtgggggc ctccaaaagg agacca          2216
//