ID U57648; SV 1; linear; genomic RNA; STD; VRL; 3374 BP. XX AC U57648; XX DT 19-JAN-1997 (Rel. 50, Created) DT 05-JUN-2011 (Rel. 109, Last updated, Version 3) XX DE Prune dwarf virus putative viral replicase gene, complete cds. XX KW . XX OS Prune dwarf virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-3374 RX DOI; 10.1007/s007050050210. RX PUBMED; 9672650. RA Rampitsch C., Eastwell K.C.; RT "The complete nucleotide sequence of prune dwarf ilarvirus RNA-1"; RL Arch. Virol. 142(9):1911-1918(1997). XX RN [2] RP 1-3374 RA Rampitsch C.; RT ; RL Submitted (06-MAY-1996) to the INSDC. RL University of British Columbia, Plant Science, 2357 Main Mall, Vancouver, RL British Columbia, Canada, V6T 1Z4 XX DR MD5; a5ecf9ca3d8a4bd620bdeaf4d7ccbaf4. XX FH Key Location/Qualifiers FH FT source 1..3374 FT /organism="Prune dwarf virus" FT /segment="RNA1" FT /host="Prunus sp." FT /isolate="Salmo BC cherry" FT /mol_type="genomic RNA" FT /db_xref="taxon:33760" FT 5'UTR 1..38 FT CDS 39..3206 FT /codon_start=1 FT /product="putative viral replicase" FT /db_xref="GOA:P89033" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:P89033" FT /protein_id="AAB39537.1" FT /translation="MTSSEITAANVHELLVKVLEKQCADETTTVGKAFSEKAKQSLNKT FT FGLNDESKQLKISFDLTAEQQTLLKRHFPGRSVIFSNSSSSSHSFAAAHRLLETDFIYQ FT CFGNTDETILDLGGNYISHLKQRRYNVHCCCPLLDVRDCARHTERLMQYTTYKTSRPDE FT VHEPNFCENTFQDCSLQGKYAMAIHSTSDLPLGELCESLRKKGVMKFICSVMIDPEMYI FT KDRGHIDHFNLDWHVDKDKDRIYFDFVDAPCLGYDHKYSTLMEYLHYNAVDLGDAAFRV FT ERKTDFHGVMIIDITYCSGYKPGIELNAGRSCAWLTKLKSKTLVMATDITSVVHPSLEA FT VSRRHILVDTKVLSRVCEASFRQYKPNVDAQSAIQSICTMLSSATNHCIINGVTMIAGT FT PLKLVDYVPVATTIYYRVKKIYDAIPRSLGMINNLRTTGEMLDYATKQKGGIPDDRKLF FT SDYAFEPLRCLLSYVGSTPTRVETYTRDDGSIEQCALYERWGNSWNLFKGFLSGYMEVE FT GFLVSDPQFFVPLTGVLHMKKLISDAGKVLSVKELLEEQRALVALKMREQIAEREKAEK FT SRREYEKAIIQLAAWTKAHPDAKVPKGLSVEEPLMPDVVKKVTADEVVPDCNPYSDAIS FT EAIDYLRSTAEISKSRLQQLGEHCRWKKYGFSTVWAGDESRRIFLPKENRWVGPTSTRQ FT VGPKAQYERGYTVNGYVNFTWDDAGNVSDACVRSLREYEIVIVDDSCVFSSVEKVIPSL FT EKALKMNCDFSITIMDGVAGCGKTTKIKSIASMVGDDIDLLLTSNRSSAIELKEAVEGS FT QLVKSRFIRTCDSYLMTNNAPKAKKMLFDECFMQHAGVIYAAATIAGVSEVIAFGDTEQ FT IPFISRNDMFLLKHHVLKGDHVKQTITYRNPADTVYALSKFFYRKKTPVKTKRHILRSI FT KVKPINALSQVEVDASAVYVTHTQAEKASLLATPSFKSCKIYTTHEVQGGSFDKVIFVR FT LTRTSNHLYSGKHPIMGACHGLVALSRHKSEFIYYTLAGGDNDDILLKACQYAERADDS FT DIVKHYV" FT 3'UTR 3207..3374 XX SQ Sequence 3374 BP; 960 A; 644 C; 768 G; 1002 T; 0 other; ggttttacga acgtggttgt tcgtatttta aatcaatcat gacttcttcc gagatcactg 60 ctgccaatgt ccatgaactt ttggttaaag ttctggaaaa gcaatgcgct gacgagacta 120 ctaccgtcgg taaggctttc tctgagaaag cgaaacagtc tttgaataag acattcggac 180 taaatgatga gtccaagcaa ctgaagattt cttttgattt gacggctgaa cagcagacgt 240 tactcaagag acattttccg ggtcgatcgg tgattttttc aaattcatcg agttcctcac 300 acagtttcgc ggcggctcac cgcttactgg agacagactt tatataccag tgttttggta 360 acactgatga aacaatactt gatttgggtg gaaattatat ttctcaccta aaacaaagga 420 ggtacaacgt gcattgttgt tgcccacttc ttgacgtgag agactgtgcc cgccatactg 480 agcgtctcat gcagtacact acctacaaga ctagcagacc tgatgaagtt cacgaaccaa 540 atttttgtga gaacacattc caggactgct ccttgcaagg taagtatgcc atggcaatcc 600 attccacttc ggatttaccc ttaggtgaac tctgtgagag tttaaggaag aaaggagtga 660 tgaagtttat atgttctgtt atgatcgatc ccgaaatgta cattaaagac aggggtcaca 720 tagatcattt caatctggat tggcatgtgg acaaggacaa agacagaatt tattttgact 780 ttgtcgatgc accctgttta gggtatgacc ataagtattc tacacttatg gagtatttgc 840 attacaatgc tgttgatcta ggtgatgccg cctttcgtgt cgagcggaaa accgattttc 900 atggggtcat gattatcgat atcacctatt gctccgggta taaacctgga attgagttga 960 atgcaggaag atcctgtgcc tggttgacca aattgaagtc aaaaactttg gtcatggcta 1020 ctgatattac gtcagtagta cacccttctt tagaagcggt gtccagaaga cacatactgg 1080 ttgacacgaa ggtcttatcc agagtgtgtg aggcttcatt ccgacagtac aaacctaatg 1140 tcgatgcgca aagtgctatt cagagtattt gcacgatgct ttcttcagct actaaccatt 1200 gtataatcaa tggtgttacc atgatcgcag gtactcccct caaattggtt gattacgtac 1260 ctgttgccac cactatttat tatagggtga agaagatcta tgatgccatt ccaaggtcat 1320 tgggaatgat caacaatctg agaacaactg gggaaatgtt ggattatgcc accaaacaga 1380 agggtggtat tcctgatgat aggaaactgt tttccgacta tgcctttgaa cccttgcgat 1440 gtttgctttc gtatgttggt tctactccca ctcgtgtgga aacctacact cgtgatgatg 1500 gttcaattga gcaatgtgct ctttatgaac gttggggcaa ttcctggaac ctttttaagg 1560 gttttttgtc gggatatatg gaagtcgaag ggtttcttgt ctccgatcca caattcttcg 1620 ttccacttac tggagttctt catatgaaga aattgataag tgatgctggg aaggtcctta 1680 gtgttaagga attgctcgag gaacaacgcg ctcttgttgc cttaaagatg cgcgagcaga 1740 ttgctgaaag agaaaaagct gaaaagagtc gccgagagta tgaaaaggcg attattcaat 1800 tggctgcttg gaccaaagca catcctgatg ctaaggttcc aaagggactt tccgtggaag 1860 aaccattgat gccggacgtt gtcaagaaag tgacggccga tgaagtagta ccagattgca 1920 acccttattc ggatgctata tctgaagcca tcgactattt aaggtcgaca gctgaaattt 1980 caaaaagcag gttacaacaa cttggtgaac attgcaggtg gaagaaatat gggttctcaa 2040 cagtttgggc tggagatgaa tccagaagaa tttttctacc taaggagaat agatgggtag 2100 gacccacatc tactcgccaa gttggtccca aagctcaata tgagagaggt tataccgtta 2160 acggttatgt gaatttcacg tgggatgatg ccggaaatgt ttccgatgcc tgcgtacgat 2220 ctctcagaga atacgaaatc gtcattgttg atgattcctg tgttttctca tcagtggaga 2280 aggtaatacc ttcactggaa aaagctttga agatgaactg tgatttttca atcacaatta 2340 tggacggtgt tgctggttgt ggaaaaacta ccaagattaa gtctattgcc tctatggttg 2400 gagatgatat agacttactc ctaacttcca acagatcctc agcaattgag ttgaaagaag 2460 ctgttgaagg gtcccagtta gttaaaagta ggttcattcg aacttgcgat tcctatctga 2520 tgacaaacaa tgctcctaaa gcaaagaaaa tgttgtttga tgagtgtttc atgcaacatg 2580 ctggggtgat atatgctgct gccacaattg ccggtgtgtc agaggttata gcctttggtg 2640 acactgaaca aataccattc atttccagga atgatatgtt tctcctgaag caccatgttt 2700 tgaaaggtga ccatgtaaaa caaacaatta cataccgaaa tcctgctgat acggtatatg 2760 ctttgtctaa gttcttctat agaaagaaga cgcctgttaa gacgaaaaga cacattctta 2820 ggtctattaa agttaaacct ataaatgctc tatctcaggt tgaggtggat gcctccgctg 2880 tgtatgttac gcatactcaa gctgagaagg ccagtttatt ggctactccg agtttcaaat 2940 cttgtaagat ttatacaact catgaggttc aagggggtag ttttgacaaa gttatatttg 3000 tcagacttac tagaaccagt aatcatttat actctggtaa gcaccctata atgggagctt 3060 gccatggact cgtggctttg tcaagacaca agtcggaatt catttattac accctagctg 3120 gaggggataa tgatgatatt cttttgaaag cctgtcaata cgctgaaaga gcggatgaca 3180 gtgatattgt caaacattat gtttgaccgt tcagattttg tcactggacg taaaaatcct 3240 tttggttaac tcgtactgcg tactttttga gttaagataa aaatgcccat tgtatcctga 3300 atggatgaca ctttttattg cctacaaatt tgtagatgcc ctcaccgtaa ggtgaggatg 3360 ccccttaagg atgc 3374 //