ID   U57457; SV 1; linear; genomic DNA; STD; VRL; 2613 BP.
XX
AC   U57457;
XX
DT   12-JUN-1996 (Rel. 48, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 10)
XX
DE   Pepper golden mosaic virus strain Tamaulipas component A, complete
DE   sequence.
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2613
RX   DOI; 10.1094/Phyto-86-1186.
RX   AGRICOLA; IND20599915.
RA   Torres-Pacheco I., Garzon-Tiznado J.A., Brown J.K., Becerra-Flora A.,
RA   Rivera-Bustamante R.F.;
RT   "Detection and distribution of geminiviruses in Mexico and the southern
RT   United States";
RL   Phytopathology 86(11):1186-1192(1996).
XX
RN   [2]
RP   1-2613
RA   Rivera-Bustamante R.F., Torres-Pacheco I., Garzon-Tiznado J.A.;
RT   ;
RL   Submitted (02-MAY-1996) to the INSDC.
RL   R.F. Rivera-Bustamante, Ingenieria Genetica, CINVESTAV Irapuato, Apdo
RL   Postal 629, Irapuato, GTO 36500, Mexico
XX
DR   MD5; 242fb1afe7804d36044b26f0cd0ef8a8.
DR   EuropePMC; PMC2812408; 20007276.
DR   EuropePMC; PMC3133700; 21177928.
DR   EuropePMC; PMC3499830; 23170183.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2613
FT                   /organism="Pepper golden mosaic virus"
FT                   /strain="Tamaulipas"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:223301"
FT   CDS             208..963
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /note="CP, AR1, AV1963"
FT                   /db_xref="GOA:Q88882"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q88882"
FT                   /protein_id="AAB66664.1"
FT                   /translation="MVKRDAPWRLMAGTSKVSGSANYSRGTGMGPKFDKAAAWVNRPMY
FT                   RKPSIYRTYRSPDVPRXCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRFQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(960..1358)
FT                   /codon_start=1
FT                   /gene="AL3"
FT                   /product="AL3"
FT                   /note="AL3, AC3"
FT                   /db_xref="GOA:Q88883"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q88883"
FT                   /protein_id="AAB66665.1"
FT                   /translation="MDSRTGESITVHQAENSVFIWEVPNPLFFRIQHVEDPLFTRTRIY
FT                   HIVVRFNHNLRRALALHKAFLHFQVWTTSMTASGTTYLSRFKFRVMLYLHTLGAIGINN
FT                   VIRAVRFATDKSYVNYVLENHEIKCKLY"
FT   CDS             complement(1105..1494)
FT                   /codon_start=1
FT                   /product="trap"
FT                   /note="trap, AL2, AC2; transactivator protein"
FT                   /db_xref="GOA:Q88884"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q88884"
FT                   /protein_id="AAB66666.1"
FT                   /translation="MLNSSSSTLPSIKAQHRIAKKRPIRRRRIDLNCGCSIFLHINCAN
FT                   NGFTHRGEHHCASGREFRFYLGGSKSPIFQDTARGGPVVHQNQDIPHRSPVQPQPTSSI
FT                   SSPQGIPPFPSLDDFDDSFWDDIFK"
FT   CDS             complement(1436..2482)
FT                   /codon_start=1
FT                   /gene="REP"
FT                   /product="Rep"
FT                   /note="rep, AL1, AC1; replication initiation protein"
FT                   /db_xref="GOA:Q88885"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q88885"
FT                   /protein_id="AAB66667.1"
FT                   /translation="MPLPPKSFRLQCKNIFLTYPQCDIPKDEALEMLRNLKWAVVKPIY
FT                   LRVSREEHSDGFPHLHCLIQLTGKCNIKDARFFDITHPRRSAQFHPNVQASKDANAVKN
FT                   YITKDGDYCESGQYKVSGGSKANKDDVYHNAVNAASAGEALDIIKAGDPKTFIVSYHNI
FT                   KANIERLFTTPPMPWTPPYPLSSFNNVPEDMQHWVAEYFGRSCARPDRPISIVIEGDSR
FT                   CGKTMWARALGPHNYLSGHLDFNAKVYSNYVEYNVIDDITPQYLKMKHWKELIGAQKDW
FT                   QSNCKYGKPVQIKGGIPSIVLCNPGEGSSYIAFLNKEENAELRAWTLKNAQFVILHAPL
FT                   YKSTAQDS"
XX
SQ   Sequence 2613 BP; 675 A; 557 C; 629 G; 750 T; 2 other;
     accggatggc cgcgattttt tggagtcttt aggggaccac tcacaataga gggctgagat        60
     taaatagaca gagtgagggg accaccaatt atttgatttt gactgaccaa tcacatcccg       120
     cctgtcaagt ctagatattt gtgccttggt gaccaaggtg tgggcctata aatgcacgtg       180
     catctgcatt tatcgcttta attcaaaatg gttaagcggg atgccccatg gcgtttaatg       240
     gcggggacct ctaaggtttc cggctctgcg aattattcac gtggcacggg tatggggcct       300
     aaattcgata aggccgctgc ttgggttaac aggcccatgt acaggaagcc cagtatatat       360
     cgtacgtata gaagcccaga tgtgcctaga ssatgtgaag ggccatgtaa ggtccagtcc       420
     ttcgagcagc ggcatgatat ctcgcatgtt ggcaaggtca tgtgcatttc tgacgtgaca       480
     cgtggtaatg gtattaccca tcgtgtaggc aagcgtttct gcgtcaagtc tgcatacgtt       540
     ctgggtaaga tatggatgga cgagaatatc aagctcaaga accacaccaa cagcgtcatg       600
     ttctggctcg tgagagatag gagaccatat ggtaccccta tggactttgg tcaggtgttc       660
     aacatgtatg acaacgagcc cagtacagct actgtgaaga acgatttgcg tgatcgtttc       720
     caagtcatgc acaggttctc ggctaaggtc acaggtggac agtatgccag caacgagcag       780
     gcattggtta ggcgtttctg gaaggtgaac aactacgtcg tgtacaacca tcaggaagct       840
     ggcaaatacg agaatcatac tgagaacgcc ctgctattgt atatggcatg tacacatgcc       900
     tctaaccctg tgtacgcgac attgaaaatt cgaatctatt tttatgattc gataacaaat       960
     taataaagtt tgcattttat ttcatgattc tcaagtacat aatttacata ggatttgtcc      1020
     gtcgcaaaac gaacagctct gattacattg tttatgccta tggcccctag cgtatgtaaa      1080
     tacaacatga cgcgaaattt gaatctactt aaatatgtcg tcccagaagc tgtcatcgaa      1140
     gtcgtccaga cttggaaatg gaggaatgcc ttgtggagag ctaatgctcg acgtaggttg      1200
     tggttgaacc ggactacgat gtggtatatc ctggttctgg tgaacaacgg gtcctccacg      1260
     tgctgtatcc tgaaaaatag gggatttgga acctcccaaa taaaaacgga attctctgcc      1320
     tgatgcacag tgatgctctc ccctgtgcgt gaatccatta ttagcgcagt tgatgtggag      1380
     aaagatagag cagccgcagt ttaggtctat gcgtcgtctg cgaataggtc gcttcttagc      1440
     tatcctgtgc tgtgctttta tagaggggag cgtggaggat gacgaattga gcatttttta      1500
     atgtccacgc tcttaattct gcattttcct ctttgttgag gaaagctata tagctgctac      1560
     cttcccctgg attgcacagc acgattgatg gtatcccgcc tttaatttga actggctttc      1620
     cgtatttaca gttggactgc cagtcttttt gggccccaat aagctctttc cagtgtttca      1680
     tctttagata ttggggcgtg atatcatcaa tgacgttata ctccacatag tttgaataga      1740
     cctttgcatt gaaatcaaga tgaccgctca aataattatg tgggcctagt gcacgtgccc      1800
     acattgtctt gccgcatcgc gaatcaccct caatgacaat actaatcggt ctatctggcc      1860
     gcgcacaact ccgaccaaaa tattcagcaa cccaatgttg catatcctca ggaacgttgt      1920
     taaacgagga taatggataa ggaggagtcc atggcatagg aggagttgta aataggcgct      1980
     cgatgttagc ctttatgtta tgataactaa caatgaacgt tttcggatca ccagctttga      2040
     ttatgtcgag cgcctccccc gcacttgcag catttacagc gttatggtag acgtcgtctt      2100
     tatttgcttt tgaccccccg gaaactttgt actgcccaga ttcacaataa tcaccatctt      2160
     ttgttatgta atttttaacg gcatttgcgt ccttggatgc ctgaacgttt ggatgaaact      2220
     gggcagatct ccgggggtga gtaatgtcga agaaccgggc atctttgatg ttgcattttc      2280
     cagtcaactg gattagacag tgcaagtgcg ggaacccatc ggaatgctcc tctcgtgata      2340
     cccggagata gatgggtttt accactgccc attttaaatt acggagcatt tcgagagctt      2400
     catcctttgg gatatcgcat tgtggatatg ttaagaaaat gtttttacat tgtaaacgaa      2460
     aggattttgg tggtagtggc atttttgcaa atatggtgta ggactccagc agagtccctc      2520
     aacttctgtc atatgttgtg gagtcctgga gtcccttata tacataaagc ctcttgggga      2580
     ctccaagggc aaaagcggcc atcctataat att                                   2613
//