ID U56975; SV 1; linear; genomic DNA; STD; VRL; 2930 BP. XX AC U56975; XX DT 31-MAY-1996 (Rel. 47, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Beet mild curly top virus - [Worland], complete genome. XX KW . XX OS Beet mild curly top virus - [Worland] OC Viruses; Geminiviridae; Curtovirus. XX RN [1] RP 1-2930 RX PUBMED; 2230726. RA Stenger D.C., Carbonaro D., Duffus J.E.; RT "Genomic characterization of phenotypic variants of beet curly top virus"; RL J. Gen. Virol. 71(Pt 10):2211-2215(1990). XX RN [2] RP 1-2930 RX DOI; 10.1094/Phyto-86-929. RX AGRICOLA; IND20598117. RA Stenger D.C., Ostrow K.M.; RT "Genetic complexity of a beet curly top virus population used to assess RT sugar beet cultivar response to infection"; RL Phytopathology 86(9):929-933(1996). XX RN [3] RP 1-2930 RA Stenger D.C.; RT ; RL Submitted (29-APR-1996) to the INSDC. RL Biological Sciences, Northern Illinois University, DeKalb, IL 60115, USA XX DR MD5; 4ab040163bc7b2be029ad3405141e82d. DR EuropePMC; PMC3818925; 19198754. XX FH Key Location/Qualifiers FH FT source 1..2930 FT /organism="Beet mild curly top virus - [Worland]" FT /host="Capsella bursa-pastoris" FT /strain="Worland" FT /mol_type="genomic DNA" FT /db_xref="taxon:268956" FT gene 252..518 FT /gene="V3" FT CDS 252..518 FT /codon_start=1 FT /gene="V3" FT /product="V3" FT /function="movement protein" FT /note="synonym: R3" FT /db_xref="InterPro:IPR009997" FT /db_xref="UniProtKB/TrEMBL:Q65413" FT /protein_id="AAC54872.1" FT /translation="MMVCLPDWLFLLFIFSILLQSGTNFYGTFQSGSISRQLSSLSSSI FT DQLFLKVQQVVYTRYPSRDRGSDPRRRRGLSSIPEGSEEATEV" FT gene 328..708 FT /gene="V2" FT CDS 328..708 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /function="ss-ds DNA regulator" FT /note="synonym: R2" FT /db_xref="InterPro:IPR009931" FT /db_xref="UniProtKB/TrEMBL:Q65414" FT /protein_id="AAC54873.1" FT /translation="MGPFRVDQFPDNYPAFLAVSTSCFLRYNRWCILGIHQEIEALTLE FT EGEVFLQFQKEVKKLLRCKVNFHRKCSLYEEIYKKYVYNVPEKKGESSKCLAEEEEDYY FT DFEEIPMEETCDKKQDSEVKDV" FT gene 548..1312 FT /gene="V1" FT /note="capsid" FT CDS 548..1312 FT /codon_start=1 FT /gene="V1" FT /product="V1" FT /note="capsid; synonym: R1" FT /db_xref="GOA:Q65415" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:Q65415" FT /protein_id="AAC54874.1" FT /translation="MRKYTRNTYTMSQKRKVNPQSAWPKKRRTTTTSRKYQWRRPVTKN FT RTPKLKMYDDMLGAGGIGSTISNNGMITMLNNYVQGIGDSQRANNVTVTKHLKFDMALM FT GSSPFWETPNYMTQYHWIIIDKDVGSVFPTKLSSIFDIPDNGQAMPSTYRIRRDMNERF FT IVKKKWRTHLMSTGTGYGGKETYKAPSMPNYKKPMNINVRNLNMRTIWKDTGGGKYEDV FT KENALLYVVVNDNTDNTNMYATLFGNCRCYFY" FT gene complement(1329..1739) FT /gene="C3" FT CDS complement(1329..1739) FT /codon_start=1 FT /gene="C3" FT /product="C3" FT /note="synonym: L3" FT /db_xref="GOA:Q65416" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q65416" FT /protein_id="AAC54877.1" FT /translation="MTAITDFRTELPITLEQATKSTPTTSVPNPLYFKLLWFERYGTIY FT QLKVQMRFNHNLRKSLNLHKCWIDMTITGSHRTLTGDRFLRVLKNQVDREIKKRSSLSI FT NIVIEILNHVLYSVFNFVNSVIQYTSIAMKLY" FT gene complement(1426..1869) FT /gene="C2" FT CDS complement(1426..1869) FT /codon_start=1 FT /gene="C2" FT /product="C2" FT /note="synonym: L2. Related to subgroup III geminivirus AC2 FT gene product" FT /db_xref="GOA:Q65417" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q65417" FT /protein_id="AAC54876.1" FT /translation="MKPLSPGLYRIQPSLNSPALSLIKIQKRPRKVNLPCKCHFTIHHD FT CHHGFSHGTTYYPGTGDEINTNNIGSESTLLQTPMVREIRNDLSTQSPDEIQPQPPQIA FT QPAQVLDRYDDNWIPQDIDWRPFFESLEEPSRQGNQKTIFSLN" FT gene complement(1760..2836) FT /gene="C1" FT /note="replication initiator protein" FT CDS complement(1760..2836) FT /codon_start=1 FT /gene="C1" FT /product="rep" FT /function="replication initiator" FT /note="synonyms: C1, L1" FT /db_xref="GOA:Q65418" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q65418" FT /protein_id="AAC54875.1" FT /translation="MPRSPSFQIKAKNIFLTYPRCSVIKEDALEILKNIPCPSDKLFIR FT VSQEKHQDGSLHLHALIQFKGKAQFRNPRHFDITHPSSSSTFHPNFQGAKSASDVKQYI FT EKDGDYVDWGTFQVDGRSARGGQQTANDAAAEALNAGNAAEALQIIREKLPEKYIFQYH FT NLKPNLEAIFLPPPDIYQPPFPQSSFTQVPEIVQEWADSYFGVDAAARPFRYNSIIIEG FT DSRTGKTLWARSLGPHNYISGHLDFSLKTYHDDVLYNVIDDVDPAYLKMKHWKHLIGAQ FT REWQTNLKYGKPRVIKGGIPSIILCNPGDGSSYQDFLDKSENEALKSWTIQNSTFVKLS FT GPLFDKDTEASSQGQSPL" FT gene complement(2422..2679) FT /gene="C4" FT CDS complement(2422..2679) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /note="synonym: L4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q65419" FT /protein_id="AAC54878.1" FT /translation="MGLCISTPSSNSKVKHNSETLDTSTSLILPQAPPSTPTSKEQNLH FT PMLNNTSRRTVITSTGVHFKSTEDLLEEASRRLMMQQQKH" XX SQ Sequence 2930 BP; 827 A; 500 C; 663 G; 940 T; 0 other; accggatggc cccgaaaatt ttgccccccc aattgtaacg tgacacgtgt tatcgcatta 60 tacgttgtcg gtgcttggaa acttcctatg taagtttcct tctctaacaa gttttgacta 120 gtcaaaagtt gcggccgaca actaccttta cttttttaaa gtaaagtaag tttattattc 180 aaaacttgct gtgtaagttt ggaatatttt tctatttaaa tagctatacg aatacgtata 240 ggtatttata aatgatggtc tgtttaccag actggttatt tttgctattt atcttcagta 300 ttctactgca atcaggtacg aatttttatg ggacctttca gagtggatca atttccagac 360 aattatccag cctttctagc agtatcgacc agttgtttct taaggtacaa caggtggtgt 420 atactaggta tccatcaaga gatagaggct ctgaccctag aagaaggcga ggtctttctt 480 caattccaga aggaagtgaa gaagctactg aggtgtaagg tcaattttca taggaagtgt 540 tcgttgtatg aggaaatata caagaaatac gtatacaatg tcccagaaaa gaaaggtgaa 600 tcctcaaagt gcttggccga agaagaggag gactactacg acttcgagga aataccaatg 660 gaggagacct gtgacaaaaa acaggactcc gaagttaaag atgtatgatg atatgcttgg 720 tgctggtggt ataggatcta ccattagtaa taatggtatg attactatgc tgaataatta 780 tgtccagggt attggtgata gtcagagagc gaacaacgtt actgtgacga agcatttgaa 840 gtttgatatg gctcttatgg ggagttctcc gttctgggag actcctaatt atatgaccca 900 atatcattgg attatcatag acaaggatgt tgggtcagtg ttccctacta agttatccag 960 tatatttgat attccggata acggtcaggc tatgccgtct acttatcgta ttcgaagaga 1020 tatgaacgag aggttcattg tgaagaagaa gtggagaact catttgatgt ctactggtac 1080 tggctatgga ggcaaggaga cttacaaggc tccttcaatg ccaaattaca agaaaccgat 1140 gaatatcaat gtccgtaatc tgaacatgag gactatttgg aaagataccg gaggtgggaa 1200 gtatgaagac gtgaaggaga atgctttact ctatgttgtt gttaatgata atactgataa 1260 tactaatatg tatgccactt tgtttggcaa ttgtagatgt tatttctatt aataaaacta 1320 ttttttattt aatacaactt cattgcaata ctagtatatt gtattacact attgacgaaa 1380 ttgaagacag aatacaatac atgatttaat atttctatta caatgttaat tgagagagaa 1440 gatcgttttt tgatttccct gtcgacttgg ttcttcaaga ctctcaaaaa acggtctcca 1500 gtcaatgtcc tgtgggatcc agttatcgtc atatcgatcc aacacttgtg caggttgagc 1560 gatttgcgga ggttgtggtt gaatctcatc tggactttga gttgataaat cgttccgtat 1620 ctctcgaacc ataggagttt gaagtagagt ggattcggaa ccgatgttgt tggtgttgat 1680 ttcgtcgcct gttccagggt aataggtagt tccgtgcgaa aatccgtgat ggcagtcatg 1740 atgaattgtg aagtgacact tacaggggag attgaccttg cgaggacgct tctgtatctt 1800 tatcaaagag agggccggag agtttaacga aggttgaatt ctgtatagtc caggacttaa 1860 gggcttcatt ttctgattta tctaggaagt cctggtaaga gctgccatct cctgggttgc 1920 ataatataat actgggaata ccacctttaa tgacacgtgg ttttccatac tttaagtttg 1980 tctgccactc tctttgtgcg cctatgaggt gtttccaatg cttcatcttt aagtaagctg 2040 ggtctacgtc atcaatgacg ttatataaaa catcatcgtg atatgttttt aaactaaaat 2100 ctaaatgccc tgaaatgtaa ttatgaggtc ctaatgatct agcccacaaa gtcttacccg 2160 ttctagaatc accctctatg attatactat tatatctaaa aggccgcgca gcggcatcca 2220 ccccgaaata agaatctgcc cactcttgaa caatttctgg aacttgagtg aaagaagatt 2280 gtgggaatgg aggttgataa atatctggtg gaggaagaaa aatggcttct aagttaggtt 2340 taaggttgtg atactgaaaa atatattttt ctgggagttt ctcccttatt atttgcagtg 2400 cttcagctgc attacctgca tttaatgctt ctgctgctgc atcattagcc gtctgctggc 2460 ctcctctagc agatcttccg tcgacttgaa atgtacccca gtcgacgtaa tcaccgtcct 2520 tctcgatgta ttgtttaaca tcggatgcag attttgctcc ttggaagttg gggtggaagg 2580 tggagcttga ggaaggatga gtgatgtcga agtgtctagg gtttctgaat tgtgctttac 2640 ctttgaattg gatgagggcg tggagatgca gagacccatc ctgatgtttt tcctgggata 2700 ctctaataaa taatttatca gatgggcaag gaatattttt caatatttct agagcatctt 2760 cttttataac tgaacatcgt gggtatgtta gaaagatatt tttggcttta atttgaaatg 2820 atggtgaacg aggcatggtt actattccta ttgggggctc tcgtaaactt gtatgaatgg 2880 ggtgctatgg gagcccttat atacctccag gggccatccg caataatatt 2930 //