ID   U51455; SV 1; linear; mRNA; STD; VRL; 1563 BP.
XX
AC   U51455;
XX
DT   27-JAN-1997 (Rel. 50, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Sugarcane mosaic virus NIb replicase mRNA, partial cds.
XX
KW   .
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1563
RX   DOI; 10.1007/BF01718631.
RX   PUBMED; 9526537.
RA   Handley J.A., Smith G.R., Dale J.L., Harding R.M.;
RT   "Sequence diversity in the NIb coding region of eight sugarcane mosaic
RT   potyvirus isolates infecting sugarcane in Australia";
RL   Arch. Virol. 141(12):2289-2300(1996).
XX
RN   [2]
RP   1-1563
RA   Handley J.A.;
RT   ;
RL   Submitted (15-MAR-1996) to the INSDC.
RL   Jennifer A. Handley, Center for Molecular Biotechnology, Queensland
RL   University of Technology, George St., Brisbane, Queensland 4001, Australia
XX
DR   MD5; 3cea3ba61e0b0f4de5c7797c51d7c1b9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1563
FT                   /organism="Sugarcane mosaic virus"
FT                   /map="3kb from 3' end of ssRNA genome"
FT                   /strain="A"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..>1563
FT                   /codon_start=1
FT                   /product="NIb replicase"
FT                   /note="RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:P89203"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:P89203"
FT                   /protein_id="AAC56416.1"
FT                   /translation="CKITETWLTECVQDNLQVVAKCPGQLVTKHVVKGPCPHFQLYLST
FT                   HDEARAYFTPLLGKYDKSRLNRAAFIKDISKYAKPIYIGEINYDVFEKAIERVIRTLRD
FT                   VGMQQCTYVTDEEEIFKSLNLNAAVGALYTGKKKDYFADFSEEDKAEIVMRSCERLYNG
FT                   QLGIWNGSLKAEIRPIEKTMLNKTRTFTAAPLETLLGGKVCVDDFNNQFYSHHLEGPWT
FT                   VGITKFYGGWNRLLEKLPEGWIYCDADGSQFDSSLTPYLINAVLHIRLQFMEEWELGAQ
FT                   MLRNLYTEIVYTPIATPDGSIIKKFKGNNSGQPSTVVDNTLMVILAFNYAMLSSGIQDN
FT                   EIDNCCKMFANGDDLLLAVHPDYEHVLDGFQTHFGNLGLNFEFNSRTKEKSNLWFMSTQ
FT                   GLKCEGIYIPKLEKERIVAILEWDRSNLPEHRLEAICAAMVEAWGYSDLIYEIRKFYAW
FT                   LLEMQPFANLAKEGLAPYIAETALRNLYLGSGIKEEEIEKYFKQFAKDLPGYLEDYNDE
FT                   VFHQ"
XX
SQ   Sequence 1563 BP; 516 A; 307 C; 340 G; 400 T; 0 other;
     tgtaaaatca ctgagacttg gctcacggaa tgtgtacaag ataatctcca agtcgttgca        60
     aaatgtcctg gccagcttgt gaccaagcat gtcgttaaag gtccatgtcc acatttccaa       120
     ctgtacctgt caacacatga tgaagccaga gcatacttta ctcctttact tgggaaatat       180
     gataagagca gactaaacag agcggctttc attaaagata tctcgaaata tgcaaaacca       240
     atttacattg gcgaaataaa ttacgatgtc tttgaaaaag ccattgaacg agtgattcgc       300
     actctcagag acgtgggaat gcagcaatgc acgtatgtca cagatgagga ggagattttt       360
     aaatcactca atcttaatgc agcagttgga gcactataca cagggaagaa aaaggattac       420
     ttcgcagatt tttcagaaga agacaaagca gaaatagtta tgagatcctg tgaacgttta       480
     tataatggac aactgggcat ttggaatgga tcgctcaaag ccgagatacg gcccatagag       540
     aagaccatgc tgaacaagac ccgcactttt acagcagcac cattggaaac cttacttggt       600
     ggaaaagtgt gtgttgatga tttcaacaac caattctatt cacatcatct agagggtcct       660
     tggacggttg gaattacaaa attctatgga ggatggaacc gattgctcga gaagttgcca       720
     gaaggatgga tttactgtga tgctgatggc tcacaattcg atagctccct aacaccatat       780
     ctcataaatg ccgtgctaca cattcgacta caatttatgg aggagtggga gctaggcgca       840
     caaatgttac gaaatctgta cactgagatc gtctacacac caattgcaac accagacggt       900
     tccataatca agaaatttaa aggaaacaac agtggtcaac catcaactgt agtcgataac       960
     acgctaatgg tcatcttagc attcaattat gcaatgttgt caagtggaat acaagacaat      1020
     gaaatcgata attgttgcaa aatgtttgct aatggagatg atctactgtt ggcagtacat      1080
     cccgattatg aacatgtact ggatggcttt cagacccact ttggaaacct tggtttaaac      1140
     tttgaattca attcacgaac gaaggaaaaa tcgaatttgt ggttcatgtc aacacaggga      1200
     ctcaagtgtg agggcattta cataccaaaa ctcgaaaagg aaagaatagt cgccatactc      1260
     gagtgggatc gttcaaatct acccgagcac cgtttagaag ccatttgtgc agcaatggtc      1320
     gaagcgtggg gctactcaga cctcatatat gaaattcgga aattttatgc atggcttttg      1380
     gaaatgcaac catttgcaaa tctagccaaa gagggtctag ctccatatat tgcagaaaca      1440
     gcgcttcgaa acttgtatct aggttcaggg atcaaggaag aggaaatcga aaaatacttc      1500
     aagcagtttg caaaggacct ccctgggtat ttagaggatt acaacgatga agttttccac      1560
     caa                                                                    1563
//