ID U51331; SV 2; linear; genomic RNA; STD; FUN; 3570 BP. XX AC U51331; XX DT 03-AUG-1996 (Rel. 48, Created) DT 03-JUN-2000 (Rel. 63, Last updated, Version 6) XX DE Thanatephorus cucumeris mitochondrial virus-like double-stranded RNA DE element dsRNA viral RNA-dependent RNA polymerase gene, complete cds. XX KW . XX OS Thanatephorus cucumeris OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; OC Cantharellales; Ceratobasidiaceae; Thanatephorus. OG Mitochondrion XX RN [1] RX DOI; 10.1094/Phyto-84-633. RX AGRICOLA; IND20443642. RA Lakshman D.K., Tavantzis S.M.; RT "Spontaneous appearance of genetically distinct double-stranded RNA RT elements in Rhizoctonia solani"; RL Phytopathology 84(6):633-639(1994). XX RN [2] RP 1-3570 RX DOI; 10.1073/pnas.95.11.6425. RX PUBMED; 9600982. RA Lakshman D.K., Jian J., Tavantzis S.M.; RT "A double-stranded RNA element from a hypovirulent strain of Rhizoctonia RT solani occurs in DNA form and is genetically related to the pentafunctional RT AROM protein of the shikimate pathway"; RL Proc. Natl. Acad. Sci. U.S.A. 95(11):6425-6429(1998). XX RN [3] RP 1-3570 RA Lakshman D.K.; RT ; RL Submitted (13-MAR-1996) to the INSDC. RL Dilip K. Lakshman, University of Maine, Plant Biology and Pathology, RL 5722-Deering Hall, Orono, ME 04469-5722, USA XX RN [4] RC Sequence update by submitter RP 1-3570 RA Lakshman D.K.; RT ; RL Submitted (04-MAR-1999) to the INSDC. RL Dilip K. Lakshman, University of Maine, Plant Biology and Pathology, RL 5722-Deering Hall, Orono, ME 04469-5722, USA XX DR MD5; 37a21f771dfd543e1760bddad989c96c. DR EuropePMC; PMC27765; 9600982. XX CC On Mar 4, 1999 this sequence version replaced gi:1469944. XX FH Key Location/Qualifiers FH FT source 1..3570 FT /organism="Thanatephorus cucumeris" FT /organelle="mitochondrion" FT /isolate="anastomosis group 3, Rhs 1A1" FT /mol_type="genomic RNA" FT /tissue_type="mycelium" FT /note="anamorph=Rhizoctonia solani; black scurf of potato" FT /db_xref="taxon:107832" FT misc_RNA 1..3570 FT /note="virus-like double-stranded RNA element" FT CDS 422..2686 FT /codon_start=1 FT /transl_table=4 FT /product="dsRNA viral RNA-dependent RNA polymerase" FT /db_xref="GOA:Q9ZXZ7" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:Q9ZXZ7" FT /protein_id="AAD17381.1" FT /translation="MLLLAYKYSSFYCNRQPACNTNMNKTNLNQKGINLLALLSTKYVE FT VSKMIPLSDKIGTTLFKPLGYNNMLSHGRIGRLASGIRKTNFFISFTLNMWRTHGTTFT FT IKWLKGCSVAIQKCLGKDILKSLRVLTPDLPLNGLSRGLPRIIPVEDRVKIRRGHVPTI FT RFWLGLFNLYRVLKAPSELKLGTITNKFTGDRDGLRALMRFALKFNPFVEFNKLDKKSL FT APTKFIMSRSASPSNKVSWFGILTDTRLLREGSPRLWENIQAYLTMVGADQFRFDLDYA FT CSLADRLKSFDDKVDSQGQWIRQVSKSGQVLTQVDSMKSKDSIRGHGIGPGLGLSQFAL FT KEEAAGKIRLFALMDSITQSVMSPLHDYMFAILRNIPNDGTFDQEASIARSQEKAVTAG FT KAFSYDLTAATDRLPVILTAFILSTIVGIRTFGGLWRSILVKRPFGFNSNVAEKLKVSD FT GPYFYEVGQPMGALSSWPGLALTHHWIVQVAAFRVTNSKSWNTEYEILGDDIVIFNELI FT AQEYLNIMAVIGCEINLNKSISSRCRPVFEFAKRTCWGFAIVSGISLAQIRAGWRIGGR FT VANALQFARAGLLEPGESLLQAILSRNTFSKGRVLPGYKTESVTSQKALALGVLALLGE FT RFRSGIIPLRTVMHAIIDPISKNLDLKGDAIAIPIKASLHAAYQALVEGDKPQLYPFSK FT EWNREPKFLENEDKLASRLLHSALNKVIILRDQYNWFIAENASEMYFPLSYLNNSSAKY FT L" XX SQ Sequence 3570 BP; 1052 A; 746 C; 798 G; 974 T; 0 other; tggggcttct gtccaattaa ggactcagct aatccacacc ctctggttaa taccagaatt 60 cgtggagctg aagaaagatt ggatagttgc ttagggaaac gtggaggttc tattacgtga 120 gtaatacgac ccattcactt agtacggctt gctctatccg ggtgcgattt gctagttctg 180 aaaaggacga cacaaccctc tgagatagaa agctaatggc gaacaagtat ctactacccc 240 gcaagggacg attagaagct tagtagcctc cgcacatcct acgggataaa acttgctgca 300 ttagtaagag aatatttaga agcgagtagg cagaaggtta ataaaccttg ctaccttcgg 360 gtagaaaagg aatcctgttc ggaactccag ttcaggaccc gccatcatca ttaatacggt 420 gatgttactg cttgcctata agtattcttc tttctactgt aaccgtcagc cggcctgtaa 480 tactaatatg aacaaaacaa acttaaacca aaaagggata aatctgttgg ctctattaag 540 tactaagtac gtggaggttt ctaaaatgat accgctttcc gataaaatcg gaactacact 600 attcaaacca ttgggataca ataacatgtt atctcatggt agaataggta gattggcaag 660 tgggataaga aaaacgaatt tctttataag ctttacactg aacatgtgga gaacacacgg 720 gacaaccttt accataaaat ggttgaaagg atgctccgtg gctatccaaa aatgtctagg 780 taaagatata ttgaaatctc taagagtctt gacaccagat cttcctttga atgggttgtc 840 acgtggactt ccaagaatta tacctgttga agacagagta aaaattcgaa gaggacacgt 900 accaacaatc cgattctggc tcgggttatt taacctttac cgggtgctaa aagcgcccag 960 cgagctgaaa ttgggaacca ttactaataa atttactggg gatagagatg ggttacgagc 1020 tttgatgcga tttgcattga agttcaaccc tttcgtcgaa tttaataaat tagacaaaaa 1080 gtctctagct cccactaagt ttattatgtc tagatcggct tcgccgtcta acaaagtgtc 1140 ttggtttggg atcttaacag atacccgact tcttagagaa ggatctccca gattatggga 1200 aaacatccaa gcttacctaa ccatggtagg ggcagaccag ttcagatttg atctggatta 1260 tgcttgctct cttgcagatc gacttaaatc atttgatgat aaagttgatt cgcagggtca 1320 atggataaga caagtctcga aatcgggaca agttcttact caagttgact caatgaaatc 1380 gaaagattcc attagaggtc atggtattgg tcctggactt ggtctttcgc aatttgcgct 1440 caaagaagaa gctgctggaa aaatccggct cttcgctttg atggattcaa taacacaaag 1500 tgttatgagt cctctccatg attacatgtt tgccatctta aggaatattc ctaacgatgg 1560 gacatttgat caagaggcat caattgctag atcccaagaa aaggccgtta ccgcgggcaa 1620 ggcattcagt tatgatctga ctgctgctac ggatcgacta cctgtaatcc ttactgcgtt 1680 catactctcc acaatcgtgg ggattagaac gtttgggggt ctttggaggt caattttggt 1740 caaaagacct tttggtttca acagcaatgt tgctgagaaa ttgaaagtct ctgacggtcc 1800 gtacttctac gaggtagggc aacctatggg tgctctatct tcttggcccg gtcttgcctt 1860 aacgcatcac tggattgtcc aagttgccgc ttttagagtt acaaattcta agagttggaa 1920 caccgagtat gaaatacttg gtgatgatat cgtaatattc aatgaactta tcgctcaaga 1980 atatctaaat atcatggctg taatcgggtg tgagattaat ttaaataaat caatctcctc 2040 ccgatgccgt cccgttttcg aattcgcaaa acgaacctgt tggggctttg caatagtaag 2100 tggaatctcc ctcgctcaaa taagagcggg ttggagaatc gggggtcgtg tagctaatgc 2160 tctgcaattt gcaagagcag gactactaga acccggtgaa tccctgttgc aagctatcct 2220 ttctagaaat accttttcaa aaggtagagt attgccaggt tacaagacgg agtcagtaac 2280 ctcacaaaag gctctagcct taggggtact ggcgttgtta ggggagagat tccgatctgg 2340 aatcatcccg ctaagaacgg taatgcacgc gatcatagat cctatttcta agaatctaga 2400 tctgaaaggg gatgctatcg ctatccctat caaagcgtca ttacatgcag cttaccaggc 2460 attggtggaa ggagataaac ctcagctcta cccattctca aaagaatgga atagagagcc 2520 aaagttcctc gagaatgaag acaaactggc gagccggttg cttcattccg cacttaataa 2580 agtgatcata ctccgagacc aatacaattg gtttatcgcg gaaaacgcgt cggagatgta 2640 ctttccctta agttatttaa ataactcaag tgcgaagtac ctctaaacga tctaccaggg 2700 ccatacttag ccctagtgac cgagattgag caattcttcg aaatgctaat cggtttagag 2760 atgaactgga cagatagtcc agaggctata taccaagacc tatatatgga aatggatgcc 2820 acactttatt atgaggaggc ccttgagctt cacgaaaggg ttgataaact cgagtttaaa 2880 cttaaacctt atgaaggtaa agtcaaaccc gggcggaccg tccacgagac tgcaccaata 2940 cttactgctt tacgcggtat tcttggtacg agtcttcgta gatggaacaa ccctcctaac 3000 ccatcaacta ttagtacatt gatgcgttag gcgtggcagg attctcccgc ctgtttaatc 3060 agatgaaagg ctcctcaata gagagaccga cccctagggg acgactctac gatgaagatt 3120 ctctattatc tacttcttga cacttcgagc agtctttgtt aagtttatta acaataaaaa 3180 ccatgccctt aggtccgggt gaaataccgg gaaaccatgg gggatagttc ttatcaaaga 3240 actccaagaa acggaagaag tgataaagtg atccaactcg cataaaatct atgcgcatcg 3300 gcctgaccaa gggcactggg tgttatacca ggtaacttgg aaggggaccg acggtgtgga 3360 aacctttcta tccgattcat cgggtggact tcttattttt acaaaccaga gtggttcact 3420 gaagaaccct tctcggctta gtactaacga ggcttctctt tacagattag cgcagttagg 3480 actaatgtcc gatcttaacc tccataaaag gagacttcgg tcttcgggtt tggatttggt 3540 taggcggaat ttctttccgc cagaagcccc 3570 //