ID U49907; SV 1; linear; genomic DNA; STD; VRL; 3080 BP. XX AC U49907; XX DT 10-APR-1996 (Rel. 47, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Horseradish curly top virus movement protein (V3), (V2), capsid protein DE (V1), (C2), replication initiator protein (C1) and (C4) genes, complete DE cds. XX KW HrCTV. XX OS Horseradish curly top virus OC Viruses; Geminiviridae; Curtovirus. XX RN [1] RP 1-3080 RX PUBMED; 8757976. RA Klute K.A., Nadler S.A., Stenger D.C.; RT "Horseradish curly top virus is a distinct subgroup II geminivirus species RT with rep and C4 genes derived from a subgroup III ancestor"; RL J. Gen. Virol. 77(Pt 7):1369-1378(1996). XX RN [2] RP 1-3080 RA Stenger D.C., Klute K.A., Nadler S.A.; RT ; RL Submitted (24-FEB-1996) to the INSDC. RL Drake C. Stenger, Biological Sciences, Northern Illinois University, RL DeKalb, IL 60115, USA XX DR MD5; d7ef6429a3e469ea9b2e15457eb5b305. DR EuropePMC; PMC2887567; 19759238. DR EuropePMC; PMC3066396; 21193937. DR EuropePMC; PMC3818925; 19198754. XX FH Key Location/Qualifiers FH FT source 1..3080 FT /organism="Horseradish curly top virus" FT /mol_type="genomic DNA" FT /clone="pHRCT" FT /note="infectious; isolated from horseradish after passage FT in Capsella bursa-pastoris" FT /db_xref="taxon:46448" FT CDS 175..441 FT /codon_start=1 FT /gene="V3" FT /product="movement protein" FT /db_xref="InterPro:IPR009997" FT /db_xref="UniProtKB/TrEMBL:Q68539" FT /protein_id="AAB18922.1" FT /translation="MMVCLPDWVFLLFIASILLQACTNFYGTFHSGSISKKLSSLVSRF FT DELFFQIQQVVYTRYPSRSRIVNPRRRGSLSGIPEGGEETVEA" FT CDS 251..628 FT /codon_start=1 FT /gene="V2" FT /db_xref="InterPro:IPR009931" FT /db_xref="UniProtKB/TrEMBL:Q68540" FT /protein_id="AAB18923.1" FT /translation="MGPFTVGQFPRNYPALLAVSTSCFFRYNKWCILGIRHEVESLTLE FT EGEAFLGFQKEVKKLLKRKCTFSRKCELYEEIYKKYLSDGPEEKGSLPTVMVEEEEDWA FT HEKIPMEEACSQDEGPEIEDV" FT CDS 471..1232 FT /codon_start=1 FT /gene="V1" FT /product="capsid protein" FT /db_xref="GOA:Q68541" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:Q68541" FT /protein_id="AAB18924.1" FT /translation="MRRYTRNTYQMGQKRKAPYQPSWSKKRKTGPMRKYQWKRPARKTK FT ALKLKMYDDMLGAGGLGSTISNNGMITMLNNYVQGIGDSQRSTNTTITKHMKFDMALMG FT SSSFWDTPNYMTQYHWIIIDKDVGSVFPVKLDDIFDIPSNGQAMPSTFRIRRDSNERFI FT VKRKWTTHLMSTGAAYGSKDIYKGPSMPNYKKGMNINIRNLNVKTIWKDTGGGKYEDVK FT ENAILYIVVNDNADNTNMYATLFGNCRCYFY" FT CDS complement(1576..1980) FT /codon_start=1 FT /gene="C2" FT /db_xref="UniProtKB/TrEMBL:Q68542" FT /protein_id="AAB18925.1" FT /translation="MPFLYSWILHYSTMESIKYSIKNLRRTIWEIEATKKQPDLYTLKI FT KVIEGRGRTVPPGSFMTYYFSFLLDRSDQSFGLVIDEWIRIVRILFRVDDITHLDIEQI FT GSSFNLALLTYDVNILEIVDSYCTTLKVLF" FT CDS complement(1928..2968) FT /codon_start=1 FT /gene="C1" FT /product="rep" FT /note="replication initiator protein" FT /db_xref="GOA:Q68543" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q68543" FT /protein_id="AAB18926.1" FT /translation="MPRQPNSFRIQARNIFLTYPQCTIPKDEMLQLLQNLNWTVVKPTY FT IRVAAERHADGTPHLHCLIQLSGKSNIKDCRFFDITHPQRSTSFHPNVQSAKDTNAVKN FT YITKEGDYCESGQYKVSGGTKANKDAVYHNAVNAGGVREALDIIKAGDPKTFVTQHHNV FT KANLEHIFAKPPEPWNPPYPLSSFTNVPEEMQEWADDYFGRPVADSHKAKSIIIEGNSR FT TGKTCWARALGTHNYLCGHLDFNMRVYSNEVEYNVIDDVAPTYLKMKHWKELIGAQRDW FT QSNCKYGKPVQIRGGVPTIILCNPGEGSSFRDFLDKPENDGLRQWTLYNAIFIFLDTPL FT FDNGIH" FT CDS complement(2524..2889) FT /codon_start=1 FT /gene="C4" FT /db_xref="UniProtKB/TrEMBL:Q68544" FT /protein_id="AAB18927.1" FT /translation="MKCFNCFKTSTGQSSNQHISESPPRDTPTEHRTSTALYNFQESPT FT SRTADFSTLLTPNGVPLSILMSNQPKTPMPSRITSPKKVIIVNPDNTRSLGEQKQTRTP FT STTTPSMQEVYERLLTS" XX SQ Sequence 3080 BP; 864 A; 557 C; 710 G; 949 T; 0 other; accggatggc cgcgatgcta ccacgtgtct taaaattgtt ggctggtcaa aagtggcggc 60 gaccggtttt ataaagtaaa gtaaagtaga ccccactagg aaacttggtc ggcaagttta 120 actttatcct tttaaataaa tacggtattt gtacatatat ttatatatgt acaaatgatg 180 gtatgtctac cagactgggt attcctacta ttcatagcta gtattcttct acaggcttgt 240 acgaattttt atgggacctt tcacagtggg tcaatttcca agaaattatc cagccttgtt 300 agccgtttcg acgagttgtt ttttcagata caacaagtgg tgtatactag gtatccgtca 360 cgaagtcgaa tcgttaaccc tagaagaagg ggaagccttt ctgggattcc agaaggaggt 420 gaagaaactg ttgaagcgta agtgtacttt ttctagaaag tgtgagttgt atgaggagat 480 atacaagaaa tacttatcag atgggccaga agagaaaggc tccctaccaa ccgtcatggt 540 cgaagaagag gaagactggg cccatgagaa aataccaatg gaagaggcct gctcgcaaga 600 cgaaggccct gaaattgaag atgtatgatg atatgcttgg tgctggtgga ttgggttcta 660 ccattagcaa taatggtatg attactatgt tgaataatta tgtccagggt attggagata 720 gtcaacggtc tactaacacg actattacga agcatatgaa gtttgatatg gcgctaatgg 780 gcagttctag tttttgggat actccaaatt acatgactca atatcattgg attatcatag 840 acaaggatgt tggttcggtg tttcctgtta agttggatga tatatttgat attccatcaa 900 atggtcaagc tatgccttct actttccgca ttaggagaga tagtaatgag aggtttattg 960 tgaagaggaa gtggactaca catttaatgt ctactggagc agcttatggt agcaaggata 1020 tttacaaggg tccttctatg cctaattaca agaagggtat gaacatcaat attcgcaact 1080 tgaatgtgaa gactatatgg aaggatactg gtggcgggaa atacgaagat gttaaggaga 1140 atgctatact ttatattgtt gttaatgata atgccgataa tactaatatg tatgctacat 1200 tatttggcaa ttgccgatgt tatttttatt aataaaataa gtaatgtatt ttaaagaatg 1260 tgcttgggtt cctacttttg ccctgccatg tccccttatc cttagggttt agttttgaag 1320 cagagcgagc gcagcgagcg taaacaaccc gaataaacgg actaggcttt gatctataaa 1380 tgcagggctt tagccctgca tttctagaca aaggcgtcaa tagactgtta actaacagtt 1440 atagtatcaa acgcaatgaa cccgaagggt tcacaaaaaa aaagcaagcg taactgtcaa 1500 gtagcgcgca gaagggggaa aaatcaagat acacacaaaa aggaagacaa tatattatta 1560 aactgcgctt ctttattaaa atagaacttt aagagtagta caatatgagt cgacgatttc 1620 taagatgttt acatcgtatg taagtagagc aagattgaaa gaagatccta tttgttctat 1680 gtccagatga gttatatcgt ctactctgaa caagatacgt acaatcctta tccattcatc 1740 gattaccaaa ccaaaagatt ggtctgaacg atcaagaaga aaagaaaaat agtaagtcat 1800 aaatgatcca ggtggtactg tcctccctcg gccttcgata accttgattt tcaaagtgta 1860 aagatccggc tgcttctttg ttgcttcgat ctcccatatt gtgcgcctga gattttttat 1920 tgaatattta atggattcca ttgtcgaata atggagtatc caggaatata aaaatggcat 1980 tatataatgt ccattgtctc aagccgtcat tttcaggctt gtctaaaaaa tctcgaaagc 2040 tagatccctc accaggatta caaagtataa tggtggggac ccctcctcta atttgaaccg 2100 gtttcccgta tttgcaattg ctttgccagt ccctttgggc cccgatgagc tctttccaat 2160 gcttcatctt caagtatgtc ggggctacgt catctatgac gttatattcc acttcgttgg 2220 aatacacgcg catgttgaag tcgaggtgtc cacacaagta gttgtgtgta cctaacgctc 2280 ttgcccagca cgtttttccc gttctactgt tcccttctat gataatggat ttggccttat 2340 ggctgtcggc aacaggcctg ccaaagtaat catcggccca ctcttgcatt tcttcgggga 2400 cgtttgtgaa ggaggagaga ggatacggcg gattccaggg ttctggtggt ttcgcgaata 2460 tgtgttcaag gttggctttt acattgtgat gttgagtcac gaatgtcttt ggatccccag 2520 cctttatgat gtcaagagcc tctcgtacac ctcctgcatt gacggcgttg tggtagacgg 2580 cgtccttgtt tgcttttgtt cccccagaga ccttgtattg tccggattca caataatcac 2640 cttctttggt gatgtaattc ttgacggcat tggtgtcttt ggctgattgg acattaggat 2700 ggaaagaggt actccgttgg gggtgagtaa tgtcgaaaaa tctgcagtcc ttgatgttgg 2760 actttcctga aagttgtata aggcagtgga ggtgcggtgt tccgtcggcg tgtctctcgg 2820 cggcgactct gatatatgtt ggtttgacga ctgtccagtt gaggttttga agcagttgaa 2880 gcatttcatc ttttggtatt gtacactgag gataagtgag aaaaatattt cttgcttgaa 2940 tacggaaaga attaggctgt cttggcattt tgaactggga ctccaggttt taggtttaat 3000 cctgtcatat tcgtggagtt ctggagtctc atttatacta aaacctctta aggccaatag 3060 cggccatccg ttctaatatt 3080 //