ID U41071; SV 1; linear; genomic RNA; STD; VRL; 3366 BP. XX AC U41071; XX DT 10-AUG-1996 (Rel. 48, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 2) XX DE Sabia virus glycoprotein precursor and nucleocapsid protein genes, complete DE cds. XX KW . XX OS Mammarenavirus brazilense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-3366 RX DOI; 10.1006/viro.1996.0381. RX PUBMED; 8661442. RA Gonzalez J.P., Bowen M.D., Nichol S.T., Rico-Hesse R.; RT "Genetic characterization and phylogeny of Sabia virus, an emergent RT pathogen in Brazil"; RL Virology 221(2):318-324(1996). XX RN [2] RP 1-3366 RA Gonzalez J.P.J., Bowen M.D., Nichol S.T., Rico-Hesse R.; RT ; RL Submitted (21-NOV-1995) to the INSDC. RL Michael D. Bowen, Special Pathogens Branch, DVRD/NCID, Centers for Disease RL Control and Prevention, 1600 Clifton Rd., N.E., Atlanta, GA 30333, USA XX DR MD5; 5cc906d7002b86efc2d484440519da86. DR EuropePMC; PMC112216; 10888638. DR EuropePMC; PMC1472595; 16731928. DR EuropePMC; PMC1524727; 16737539. DR EuropePMC; PMC1891391; 17371814. DR EuropePMC; PMC2680969; 19478873. DR EuropePMC; PMC2730321; 12095441. DR EuropePMC; PMC3047505; 12504568. DR EuropePMC; PMC3131282; 21750710. DR EuropePMC; PMC3210867; 21982818. DR EuropePMC; PMC3309595; 22377271. DR EuropePMC; PMC4111098; 24161346. DR EuropePMC; PMC516395; 15367645. DR EuropePMC; PMC6069169; 29899092. XX FH Key Location/Qualifiers FH FT source 1..3366 FT /organism="Mammarenavirus brazilense" FT /strain="SPH114202" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052299" FT CDS 59..1525 FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="cleaved to yield G1 and G2 glycoproteins" FT /db_xref="GOA:Q90037" FT /db_xref="InterPro:IPR001535" FT /db_xref="UniProtKB/Swiss-Prot:Q90037" FT /func_characterised="identical sequence" FT /protein_id="AAC55091.1" FT /translation="MGQLFSFFEEVPNIIHEAINIALIAVSLIAALKGMINLWKSGLFQ FT LIFFLTLAGRSCSFRIGRSTELQNITFDMLKVFEDHPTSCMVNHSTYYVHENKNATWCL FT EVSVTDVTLLMAEHDRQVLNNLSNCVHPAVEHRSRMVGLLEWIFRALKYDFNHDPTPLC FT QKQTSTVNETRVQINITEGFGSHGFEDTILQRLGVLFGSRIAFSNIQDLGKKRFLLIRN FT STWKNQCEMNHVNSMHLMLANAGRSSGSRRPLGIFSWTITDAVGNDMPGGYCLERWMLV FT TSDLKCFGNTALAKCNLDHDSEFCDMLKLFEFNKKAIETLNDNTKNKVNLLTHSINALI FT SDNLLMKNRLKELLNTPYCNYTKFWYVNHTASGEHSLPRCWLVRNNSYLNESEFRNDWI FT IESDHLLSEMLNKEYIDRQGKTPLTLVDICFWSTLFFTTTLFLHLVGFPTHRHIRGEPC FT PLPHRLNSRGGCRCGKYPELKKPITWHKNH" FT misc_feature 1528..1542 FT /note="intergenic region hairpin structure 1" FT misc_feature 1545..1573 FT /note="intergenic region hairpin structure 2" FT misc_feature 1576..1613 FT /note="intergenic region hairpin structure 3" FT CDS complement(1620..3308) FT /codon_start=1 FT /product="nucleocapsid protein" FT /db_xref="GOA:Q90038" FT /db_xref="InterPro:IPR000229" FT /db_xref="InterPro:IPR035083" FT /db_xref="InterPro:IPR035084" FT /db_xref="InterPro:IPR038115" FT /db_xref="UniProtKB/Swiss-Prot:Q90038" FT /func_characterised="identical sequence" FT /protein_id="AAC55092.1" FT /translation="MSNSKEIPSFRWTQSLRRGLSEFTTPVKTDVLRDAKMILDGLDFN FT QVSLVQRILRKSKRNDGDLDKLRDLNKEVDNLMSMKSSQRDTILKLGDLNKSELMDLAS FT DLEKLKRKVGQTERSASGGVYLGNLSQSQLTKRSDLLRKLGFQQQQVRSPGVVRIWDVA FT DPNRLNNQFGSVPALTIACMTKQSDNTMGDVVQALTSLGLLYTVKFPNLIDLEKLTAEH FT DCLQIVTKDESGLNISGYNYSLSAAVKAGATLLDGGNMLETIRITPDNFSQIIKTTLSI FT KKKEGMFVDEKPGNRNPYENLLYKICLSGEGWPYIGSRSQIKGRSWENTTVDLSTKPQQ FT GPRTPEKAGQNIRLSHLTELQESVVREAMGKIDPTLTTWIDIEGTSNDPVELALYQPDT FT GNYILCYRKPHDEKGFKNGSRHSHGMLLKDLESAQPGLLSYVIGLLPQNMVLTTQGSDD FT IRRLVDTHGRKDLKIVDIKLASEQARKFEEPIWSDFGHLCKKHNGVIVPKKKKDKDIPQ FT SSEPHCALLDCLMFQSAIAGQPPQTKLEGLLPDALLFTLEAAFTI" XX SQ Sequence 3366 BP; 907 A; 713 C; 727 G; 1019 T; 0 other; gcgcaccggg gatcctaggc gttttttagt cacgcttaaa tctttgattg cgtcaatcat 60 gggtcaattg ttcagctttt ttgaagaagt tccgaatatc atccatgagg ctatcaacat 120 agctctgata gcagtgagct taattgctgc cttgaaaggg atgattaact tgtggaagag 180 tggccttttc caattgatat tctttttgac tctagcagga agatcgtgtt cttttagaat 240 tggaaggagc acagaattgc aaaacataac gtttgatatg ttgaaggtat tcgaggacca 300 ccccacatct tgcatggtga atcattccac ctactatgtc catgaaaaca aaaatgccac 360 ttggtgtctt gaggtgtctg tgactgatgt taccctgctc atggctgaac atgatcgtca 420 agtcctcaac aatctgtcaa actgtgtgca ccctgcagtt gagcacagaa gcaggatggt 480 tggcttactt gagtggattt ttagagccct aaagtatgac ttcaatcatg atccaacacc 540 gttgtgtcaa aagcaaactt caacagtgaa tgaaacacgt gtgcagataa acatcactga 600 ggggtttggg tctcacgggt ttgaagatac catccttcaa agactagggg ttctattcgg 660 ttcaagaatt gcattttcaa atatccagga tttaggtaaa aaaaggtttt tattgattag 720 aaattcaact tggaaaaatc aatgcgaaat gaatcatgta aactccatgc atttaatgtt 780 ggcgaatgct ggtcgctctt ctggttctag aagaccactc ggcattttct cctggacaat 840 aactgatgca gtgggcaatg acatgcctgg tggttattgt cttgaaagat ggatgctagt 900 gacgtcagat cttaagtgct ttggaaacac agcactagca aaatgtaacc ttgaccacga 960 ttcggaattc tgtgacatgt tgaaattgtt tgagttcaac aaaaaagcga tagagacatt 1020 gaatgacaat acaaaaaaca aggtaaactt gctgacccac tcaattaatg cattaatatc 1080 tgacaactta ctgatgaaga atcgacttaa agaattgttg aacactcctt attgtaatta 1140 caccaaattt tggtatgtca atcacacagc atcaggggaa cactcattgc cacggtgctg 1200 gcttgttaga aataatagct acttgaatga aagtgaattt agaaatgatt ggattattga 1260 gagtgatcat ttattgtctg aaatgctcaa taaagaatac atagatagac agggaaagac 1320 accgttgact ttggtggata tctgtttctg gagcactttg tttttcacaa caacactgtt 1380 tcttcacctg gtaggctttc caactcatag acacatacgt ggtgaaccct gcccactacc 1440 ccataggctc aacagtagag gaggatgtag atgtgggaaa taccctgaac taaaaaagcc 1500 aatcacctgg cacaagaacc actagaagga caatcattgt ctcccaccga cccgggcaat 1560 gcccgggtcg gtgtggcccc ccagtccgcg gcaaatgccg cggactgggg agcaccaatc 1620 tagatggtga atgctgcctc cagtgtgaag agcaatgcat caggcaataa accttccagt 1680 ttggtttgag gtggttggcc tgctatggct gactgaaaca ttagacaatc aagtagggca 1740 cagtgtggct ctgaggactg tgggatgtct ttgtctttct ttttctttgg cacaataact 1800 ccattgtgtt tcttacagag gtgaccaaaa tctgaccaga ttggctcctc aaactttctc 1860 gcctgttcag atgccaattt aatgtcgaca atctttaagt ctttgcgacc gtgtgtatct 1920 actaagcgcc ttatatcatc tgaaccttgg gtggtgagga ccatgttttg aggaaggagc 1980 cctataacat agctgagcaa gcctggctgt gcagattcta ggtcctttag caacatccca 2040 tgtgaatgcc tgctaccatt tttgaacccc ttctcatcat gtggtttcct ataacagagg 2100 atataattac ctgtgtctgg ttggtacaat gctaattcaa ccggatcatt actggtaccc 2160 tcaatgtcaa tccatgttgt cagagttggg tcaatcttac ccattgcctc tctcacaact 2220 gactcttgca actcagtcaa gtgggagagt ctaatgttct gacctgcctt ttctggtgtt 2280 ctcggccctt gttggggctt tgtgcttaaa tcaacagtgg tgttttccca tgacctaccc 2340 ttgatctggg atctggagcc aatgtaaggc caaccttctc ctgaaaggca gattttgtac 2400 agaaggtttt cataagggtt tctatttcca ggtttctcat ctacaaacat gccttccttt 2460 ttctttatgg atagggttgt ctttatgatc tgagaaaagt tgtcaggagt gatccttatg 2520 gtttccagca tgttaccacc atccagaagc gttgcaccag ctttaacagc tgcagaaaga 2580 ctatagttat atcctgagat gttcaagccg ctctcatctt tagtcactat ttgaagacag 2640 tcatgttctg ctgtaagttt ttctaggtca atcaggttgg ggaacttaac tgtataaaga 2700 agtcccaaag atgttagtgc ctgaacaaca tcccccatgg tattgtcact ttgtttagtc 2760 atacaagcga ttgtcagtgc agggacagat ccaaattgat tattcagcct gttcggatca 2820 gctacgtccc aaatccttac aacccctgga gacctcactt gctgctgttg aaaaccaagt 2880 ttccttaaaa gatcagacct tttggtgagc tgtgattggg aaaggtttcc caggtacaca 2940 cctcctgagg ctgatctttc tgtttgtcca acttttcttt tcagtttctc caggtctgat 3000 gcaagatcca tcagttcaga tttgttgaga tcaccaagtt ttaagattgt gtctctttgg 3060 gaactcttca tgctcatcag gttgtccact tctttattta ggtctctcag tttatcaaga 3120 tctccatcat tccttttaga ctttctaagg atcctttgaa caagagagac ttgattgaaa 3180 tcaagaccat caagtatcat tttggcatcc ctcagaacat cggtcttcac cggtgttgtg 3240 aactcactga gccctcttct cagggattga gtccatctga agctggggat ttcctttgag 3300 ttgctcattg tggaaaagac ttgctgacca gtaaaggtag acaatttgcc taggatccac 3360 tgtgcg 3366 //