ID U35769; SV 1; linear; mRNA; STD; VRL; 3215 BP. XX AC U35769; XX DT 11-OCT-1995 (Rel. 45, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 2) XX DE Barley stripe mosaic virus CV17 RNA beta, coat protein, beta-b, beta-c, and DE beta-d protein genes, complete cds. XX KW . XX OS Barley stripe mosaic virus OC Viruses; Riboviria; Virgaviridae; Hordeivirus. XX RN [1] RX PUBMED; 8664501. RA Edwards M.C.; RT "Mapping of the seed transmission determinants of barley stripe mosaic RT virus"; RL Mol. Plant Microbe Interact. 8(6):906-915(1995). XX RN [2] RP 1-3215 RA Edwards M.C.; RT ; RL Submitted (08-SEP-1995) to the INSDC. RL Michael C. Edwards, U.S. Dept. of Agriculture, Agricultural Research RL Service, Northern Crop Science Laboratory, 1307 18th Street North, Fargo, RL ND 58105-5677, USA XX DR MD5; 8e52c626c97022dba26a6f785b29c14b. DR EuropePMC; PMC3915304; 24499968. DR RFAM; RF01072; TMV_UPD-PK3. DR RFAM; RF01075; TLS-PK1. XX FH Key Location/Qualifiers FH FT source 1..3215 FT /organism="Barley stripe mosaic virus" FT /chromosome="RNA beta" FT /host="Hordeum vulgare" FT /lab_host="Hordeum vulgare" FT /strain="CV17" FT /mol_type="mRNA" FT /clone="pCV17beta63" FT /note="This sequence is that of a full-length clone from FT which infectious RNA transcripts can be made." FT /db_xref="taxon:12327" FT CDS 75..671 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q65717" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q65717" FT /protein_id="AAA79148.1" FT /translation="MPNVSLTAKGGGHYNEDQWDTQVVEAGVFDDWWVHVEAWNKFLDN FT LRGINFSVASSRSQVAEYLAALDRDLPADVDRRFAGARGQIGLPNYLPAPKFFRLDKRT FT VAELTRLSRLTDQPHNNRDIELNRAKRATTNPSPPAQAPSENLTLRDVQPLKDSALHYQ FT YVLIDLQSARLPVYTRKTFERELALEWVIPDAEEA" FT CDS 778..2316 FT /codon_start=1 FT /product="beta-b protein" FT /db_xref="GOA:Q65718" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q65718" FT /protein_id="AAA79149.1" FT /translation="MDMTKTVEEKKTNGTDSVTSVFKDSTIPKVPTGKEMGAHGNDSST FT SELKETLKVADQTPMSVDNGAKSKLDSSDRQVPSPKLVTTVGKKPENPKIKKPKKKRNQ FT KPTQPSRPNDLKDETRESSQVGENVSENYTGVSKEAAKQRKMPKSVKMQSNLADKFKAN FT DTRRSELINKFQQFVHETCLKSDFEYTGRQYFRARSNFFEMIRLTSLYDKHLKECMARA FT CTLERERLKRKLLLVRALKPAVDFLTGIISGVPGSGKSTIVRTLLKGEFPAVCALANPA FT LMNDYSGIEGVYGLDDLLLSAVPITSDLLIIDEYTLAESAEILLLQRRLRASMVLLVGD FT VAQGQATTASSIEYLTLPVIYRSETTYRLGQETASLCSKQGNRMVSKGGKDKVIITDYD FT GETDETEKNIAFTVDTVRDVKDCGYDCALAIDVQGKEFDSVTLFLRNEDRKALADRHLR FT LVALSRHKSKLIIRADAEIRQAFLTGDIDLSSKASNSHCYSAKPDEDHSWFKAK" FT CDS 2285..2680 FT /codon_start=1 FT /product="beta-c protein" FT /db_xref="GOA:Q65719" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q65719" FT /protein_id="AAA79150.1" FT /translation="MKTTVGSRPNKYWPIVAGIGVVGLFAYLISSNQKHSTESGDNIHK FT FANGGSYRDGSKSISYNRNHPFAYGNASSPGMLLPAMFTIIGIISYLWRTRDSVLGNSG FT GNNSCGEDCQGECLNGHSRRSLLCDIG" FT CDS 2490..2957 FT /codon_start=1 FT /product="beta-d protein" FT /db_xref="GOA:Q65720" FT /db_xref="InterPro:IPR007617" FT /db_xref="UniProtKB/TrEMBL:Q65720" FT /protein_id="AAA79151.1" FT /translation="MAMPHPLECCCPQCLPSSESFPIYGEQEIPCSETQAETTPAERIV FT KANVLTDILDDHYYAILASLFIIALWLLYIYLSSVPMETGPYFYQDLNSVKIYGVGATN FT PEVIAAIHHWQKYPFGESPMWGGLVSVLSILLKPLTLVLALSFFLLLSSKK" XX SQ Sequence 3215 BP; 942 A; 642 C; 742 G; 889 T; 0 other; gtaaaagaaa aaggagcaac cctgctgttg ttcgacacta taccactagt gcatttcttt 60 taccgcttca cagtatgccg aacgtttctt tgactgctaa gggtggagga cactacaacg 120 aggatcaatg ggacacacaa gttgtggaag ccggagtatt tgacgattgg tgggtccacg 180 tagaagcctg gaataaattt ctagacaatt tacgtggtat caactttagc gttgcttcct 240 ctcggtcgca agttgctgaa tacttagctg cgttagatcg tgatctacct gctgatgtag 300 acagacggtt tgcaggtgct agaggacaaa ttggtttacc caattatctt cctgcaccaa 360 aattctttcg tctcgataag cgaactgttg ctgaactgac cagactctct cgtcttacgg 420 atcagccgca caacaatcgt gatatagagc ttaaccgagc gaaaagagcc acaactaacc 480 catctccccc ggcgcaggca ccgtcggaga atcttactct tcgtgatgtt caaccgttaa 540 aggatagtgc gttgcattat caatacgtgt tgattgacct acagagtgcg agactcccgg 600 tgtataccag gaagactttc gaacgtgaac tcgctctgga atgggtcatt ccagatgccg 660 aggaagcgtg acctgctgtc gaagcggtaa aaggatgtac atatgtatct tatttttatt 720 ttcttttact tttagttttt gctttttacg ctttaactag atgtattgac tttagccatg 780 gacatgacga aaactgttga ggaaaagaaa acaaatggaa ctgattcagt gacaagtgtt 840 ttcaaagatt cgacgattcc taaagttcca actggaaagg aaatgggtgc acatggtaac 900 gattcctcta cttctgaatt aaaggaaact ctgaaagttg ccgatcagac tccaatgtcc 960 gttgacaatg gtgccaaatc caaattggat tcttctgata gacaagttcc tagccctaag 1020 ttggtaacaa ctgtgggaaa gaaacctgag aatcctaaaa ttaagaagcc caagaagaaa 1080 cgaaaccaaa aacctactca accgagcagg cccaatgacc ttaaagatga gactagggaa 1140 tcatctcaag tgggtgagaa tgtgagtgag aactatactg gggtttctaa ggaagcagct 1200 aagcaaagga agatgcccaa gtctgtgaaa atgcaaagca atctggccga taagttcaaa 1260 gcgaatgata ctcgtagatc ggaattaatt aacaagtttc agcaatttgt gcatgagacc 1320 tgtcttaaat ctgattttga gtacactggt cgacagtatt tcagagctag atcaaatttc 1380 tttgaaatga ttaggctcac atccttgtat gacaaacatc taaaggaatg tatggcgcga 1440 gcctgcaccc tagaacgaga acgattgaag cgtaagttac tcctagtacg agctttgaaa 1500 ccagcagtag acttccttac gggaatcatc tctggagttc ctggctcagg aaaatcaacc 1560 attgtgcgta ctttgctcaa aggtgaattt ccggctgttt gtgctttggc caatcctgcc 1620 ttaatgaacg attattctgg tattgaaggc gtttacgggt tagatgacct gttgctttct 1680 gcagttccga taacgtctga tttattgatc atagatgaat atacacttgc tgagagcgcg 1740 gaaatcctgt tgctacaacg aagactcaga gcctctatgg tgttgttagt cggggacgta 1800 gctcaaggac aagccaccac tgcttccagt attgagtatt taactctgcc ggtgatctac 1860 agatcagaga cgacttatcg tttgggacaa gagactgctt cgctttgcag caagcagggt 1920 aacagaatgg tttcaaaggg aggaaaggat aaagtgatca ttactgatta cgatggcgaa 1980 acagatgaaa cggagaaaaa tatcgctttt actgtcgata cagttcgaga tgtgaaagat 2040 tgcgggtacg attgtgccct ggcaattgat gtgcaaggga aagaattcga ttcagtgact 2100 ttattcctaa ggaacgaaga ccggaaagct ttagcagata ggcatttgcg tttagtcgct 2160 ttgagcagac ataagtcgaa gttaatcatc agggccgacg cggaaattcg tcaagcgttc 2220 ctgacaggtg atattgactt gagctctaag gcgagtaact ctcattgtta ttctgcaaaa 2280 ccggatgaag accacagttg gttcaaggcc aaataagtat tggccaattg tcgccggaat 2340 cggtgtcgtt ggattgtttg cgtatttgat ttcttcaaat caaaaacatt ctacggaatc 2400 cggtgataat attcacaaat tcgccaacgg aggtagttac agagacgggt caaaaagtat 2460 aagttataat cgtaatcatc cttttgccta tggcaatgcc tcatcccctg gaatgttgct 2520 gcccgcaatg tttaccatca tcggaatcat ttcctattta tggcgaacaa gagattccgt 2580 gctcggaaac tcaggcggaa acaactcctg cggagaggat tgtcaaggcg aatgtcttaa 2640 cggacattct cgacgatcat tactatgcga tattggctag tcttttcatc attgctttat 2700 ggctattgta tatatatcta agcagtgtac ctatggagac tggtccctac ttctatcagg 2760 atctaaactc tgtgaagatc tatggagtag gggctacgaa tccagaagtt attgcggcca 2820 tccatcattg gcagaagtac ccttttgggg agtctccgat gtggggaggt ttagtcagcg 2880 ttttgagtat tcttcttaaa ccgctgacat tagttttagc gttaagcttt tttcttttgc 2940 tttcttcaaa aaagtgaaaa aaaaaaaaaa aaaaaatgtt tgatcagatc attcaaatct 3000 gatggtgccc atcaaccata tgatgggagt gtttacaagt ccactataat cgaacttgaa 3060 aaaccttgcc tgaattggaa accatgaatc ttaacggatt ctggagagaa aatttaggaa 3120 ttggtatgta agctacaact tccggtagct gcgtcacact ttaagagtgt gcatactgag 3180 ccgaagctca gcttcggtcc cccaagggaa gacca 3215 //