ID U30818; SV 1; linear; genomic RNA; STD; VRL; 3254 BP. XX AC U30818; XX DT 31-JUL-1996 (Rel. 48, Created) DT 01-DEC-2007 (Rel. 94, Last updated, Version 5) XX DE Infectious bursal disease virus structural polyprotein gene, complete cds; DE and unknown gene. XX KW . XX OS Infectious bursal disease virus (Gumboro virus) OC Viruses; Riboviria; Birnaviridae; Avibirnavirus. XX RN [1] RA Dybing J.K.; RT "Sequence analysis of infectious bursal disease virus of serotype 2 and RT expression of the vp5 cdna"; RL Thesis (1992), Pathology & Microbiology, Atlantic Veterinary College, UPEI XX RN [2] RX DOI; 10.1016/0042-6822(91)90865-9. RX PUBMED; 1651602. RA Kibenge F.S., McKenna P.K., Dybing J.K.; RT "Genome cloning and analysis of the large RNA segment (segment A) of a RT naturally avirulent serotype 2 infectious bursal disease virus"; RL Virology 184(1):437-440(1991). XX RN [3] RP 1-3254 RX DOI; 10.1007/BF01718616. RX PUBMED; 8712930. RA Kibenge F.S., Nagarajan M.M., Qian B.; RT "Determination of the 5' and 3' terminal noncoding sequences of the RT bi-segmented genome of the avibirnavirus infectious bursal disease virus"; RL Arch. Virol. 141(6):1133-1141(1996). XX RN [4] RP 1-3254 RA Kibenge F.S.; RT ; RL Submitted (03-JUL-1995) to the INSDC. RL Frederick S. Kibenge, Atlantic Veterinary College, UPEI, 550 University RL Avenue, Charlottetown, P.E.I. C1A 4P3, Canada XX DR MD5; b096df064e4807e70ceb1000a872e0f6. DR EuropePMC; PMC5289257; 27784860. DR EuropePMC; PMC5694579; 29230245. XX FH Key Location/Qualifiers FH FT source 1..3254 FT /organism="Infectious bursal disease virus" FT /chromosome="segment A" FT /host="Gallus domesticus" FT /lab_host="Colobus polykomos" FT /strain="OH" FT /mol_type="genomic RNA" FT /db_xref="taxon:10995" FT repeat_region 1..15 FT repeat_region 10..41 FT regulatory 69..79 FT /regulatory_class="ribosome_binding_site" FT CDS 98..535 FT /codon_start=1 FT /product="unknown" FT /db_xref="InterPro:IPR004284" FT /db_xref="UniProtKB/TrEMBL:Q82663" FT /protein_id="AAC55350.1" FT /translation="MVSRDQTNDRSDDKPDGSHPTDCSVHTEPSDANDRTGVHPGRHPG FT EAHTQVRNLDLQLDCRGHRVRTNCLFPWIPWFSCRCSLHTAEQWELPVRPDAPDSAEPA FT CELQLLQTSEQEPNRAVKHTPWWRLCSKWDHKRGDLPRKPE" FT CDS 132..3170 FT /codon_start=1 FT /product="structural polyprotein" FT /db_xref="GOA:P27276" FT /db_xref="InterPro:IPR002662" FT /db_xref="InterPro:IPR002663" FT /db_xref="InterPro:IPR025775" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/Swiss-Prot:P27276" FT /protein_id="AAC55351.1" FT /translation="MTNLMDHTQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTY FT NLTVGDTGSGLIVFFPGFPGSVVGAHYTLQSSGSYQFDQMLLTAQNLPVSYNYCRLVSR FT SLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDYSYNGLMSATANINDKIGNVLVGEG FT VTVLSLPTSYDLSYVRLGDPIPAAGLDPKLMATCDSSDRPRVYTVTAADEYQFSSQLIP FT SGVKTTLFTANIDALTSLSVGGELIFSQVTIHSIEVDVTIYFIGFDGTEVTVKAVATDF FT GLTTGTNNLVPFNLGGPTSEITQPITSMKLEVVTYKRGGTAGDPISWTVSGTLAVTVHG FT GNYPGALRPVTLVAYERVAAGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYT FT KLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAGAFGFKDIIRAIRKIAVP FT VVSTLFPPAAPLAHANREGVDYLLGDEAQAASGTARGASGKARAASGRIRQLTLAADKG FT YEVVANMFQVPQNPIVDGILASPGILRGAHNLDCVSKEGATLFPVVITTLEDELTPKAL FT NSKMFAVIEGAREDLQPPSQRGSFIRTLSGHRVYGYAPDGVLPLETGRDYTVVPIDDVW FT DDSIMLSQDPIPPIVGNSGNLAIAYMDVFRPKVPIHVAMTGALNASEIESVSFRSTKLA FT TAHRLGMKLAGPGDYDINTGPNWATFIKRFPHNPRGWDRLPYLNLPYLPPTAGRQFHLA FT LAASEFKETPELEDAVRAMDAAANADPLFRSALQVFMWLEENGIVTDMANFALSDPNAH FT RMKNFLANAPQAGSKSQRAKYGTAGYGVEARGPTPEEAQRAKDARISKKMETMGIYFAT FT PEWVALNGHRGPSPGQLKYWQNTREIPEPNEDYPDYVHAEKSRLASEEQILRAATSIYG FT APGQAEPPQAFIDEVARVYETNHGRVPNQEQMKDLLLTAMEMKHRNPRRAPPKPKPKPN FT APSQRPPGRLGRWIRTVSDEDLE" FT repeat_region 3172..3243 FT stem_loop 3207..3243 FT repeat_region 3240..3254 XX SQ Sequence 3254 BP; 844 A; 929 C; 857 G; 624 T; 0 other; ggatacgatc ggtctgaacc ccgggggagt cacccgggga caggcaatca ccgccttgtt 60 ccaggttggg actcctcctt ctgctatgct accattgatg gtgagtagag atcagacaaa 120 cgaccgcagc gatgacaaac ctgatggatc acacccaaca gattgttccg ttcatacgga 180 gccttctgat gccaacgacc ggaccggcgt ccatcccgga cgacaccctg gagaagcaca 240 cactcaggtc cgaaacctcg acctacaact tgactgtcgg ggacacaggg tcaggactaa 300 ttgtcttttt ccctggattc cctggttcag ttgtaggtgc tcactacaca ctgcagagca 360 gtgggagcta ccagttcgac cagatgctcc tgacagcgca gaacctgcct gtgagctaca 420 actattgcag actagtgagc aggagcctaa ccgtgcggtc aagcacactc cctggtggcg 480 tttatgctct aaatgggacc ataaacgcgg tgaccttcca aggaagcctg agtgagttga 540 ctgactacag ctacaacggg ctgatgtcag ccactgcaaa catcaacgac aagatcggga 600 atgtccttgt tggggaaggg gtgactgtcc taagtctacc aacctcatat gacctcagtt 660 atgtgaggct tggcgacccc atcccagcag caggacttga cccaaagttg atggccacgt 720 gcgacagtag tgatagaccc agagtctaca cagtaacagc cgccgatgag taccaattct 780 cgtcgcaact catcccaagt ggagtgaaga ctacactgtt caccgccaac atcgatgctc 840 ttacaagcct cagtgttggt ggtgagctta tcttcagcca agtaacgatc cacagcattg 900 aagtggacgt caccatttac ttcattgggt tcgacgggac agaggtcaca gtcaaagctg 960 ttgcaacaga ctttgggctg acaactggga cgaacaacct tgtgccattc aaccttggtg 1020 gtccaacaag tgagatcacc caacccatca cttccatgaa actagaggta gtcacctata 1080 aaagaggagg cactgctggc gatccgatat catggacagt gagcgggaca ctagctgtga 1140 cagtgcacgg tggcaactat cctggggctc tccgtcccgt caccctagtg gcctatgagc 1200 gagtggcagc aggatccgtc gtcacagttg caggggtgag caacttcgag ctgatcccaa 1260 accctgagct tgccaagaac ctagtcacag aatacggccg ctttgaccca ggagcgatga 1320 actacaccaa actaatactg agtgagagag atcgtcttgg cataaagact gtctggccaa 1380 ccagggagta cactgacttt agagagtact tcatggaagt tgccgatctc aactcaccct 1440 taaagattgc aggtgcgttt ggttttaagg acataatccg agccatccgg aagattgcgg 1500 taccagtggt atccacactc ttcccaccag ctgcacccct agcccatgca aatcgagaag 1560 gtgtggatta ccttctgggc gatgaggcac aggcagcctc agggacggct cgaggcgcgt 1620 caggaaaagc cagggctgcc tcaggaagaa taaggcagct gactctcgcc gctgacaagg 1680 ggtacgaggt ggtcgccaac atgttccagg tgccccagaa tcccattgta gatggaattc 1740 tggcatctcc aggaatcctg cgtggtgccc acaacctcga ctgcgtgtca aaagaaggag 1800 ccactctctt ccccgtggtc atcaccacac tcgaggatga gctgactccc aaggcactga 1860 acagcaaaat gtttgctgtc attgaaggcg cacgagagga ccttcaacca ccatcccaac 1920 ggggatcctt tattcgaact ctctccggcc atagagtcta tggttacgct ccagacggtg 1980 tgctaccgct cgagacggga agagactaca ccgttgtccc aattgatgat gtgtgggacg 2040 acagcataat gctgtcacag gaccccatac ctccaattgt ggggaacagc ggcaacctgg 2100 ccatagcgta catggatgtc ttcaggccta aagtccccat ccatgtggcc atgaccgggg 2160 ccctcaacgc cagcgagatc gagagtgtaa gctttcgcag taccaaactt gccactgccc 2220 accgacttgg catgaagttg gccggccctg gagattatga catcaacaca gggcccaact 2280 gggcaacgtt catcaaacgt ttccctcaca atccccgagg ctgggacagg ttgccctacc 2340 tcaacctacc ctaccttcca ccgacagcag gacgccaatt ccacctagcc ctggcagcat 2400 ctgagttcaa agagactccc gaacttgagg acgctgtacg tgcaatggat gccgctgcaa 2460 acgctgaccc attgttccgc tcagcactcc aagtcttcat gtggctggaa gaaaacggga 2520 ttgtgactga catggccaac tttgccctca gtgacccaaa cgcacacagg atgaagaatt 2580 tcctagccaa cgctccccag gccgggagca agtcacagag agccaagtat ggcacggcag 2640 gctacggagt ggaggctcga ggccccacac cagaagaggc acagagggca aaagacgcgc 2700 ggatctccaa gaagatggaa acaatgggca tctacttcgc aacgccagaa tgggtggcac 2760 tcaatgggca tcgagggcca agtcccggcc aactcaagta ttggcaaaac acacgagaga 2820 taccggaacc caacgaggac tatccagact acgtgcacgc ggagaagagc cggttggcat 2880 cagaagaaca gatcttaagg gcagccacgt cgatctacgg ggctccagga caggctgaac 2940 caccccaggc cttcatagac gaagtagcca gggtctatga aacaaaccac gggcgtgtcc 3000 caaaccaaga gcagatgaag gacctgctct tgactgcgat ggagatgaag catcgcaatc 3060 ccaggcgggc tccaccaaag ccgaagccaa aacccaatgc tccatcacag aggccccctg 3120 gtcggctggg ccgctggatc aggacggtct ctgacgagga cttggagtga ggctcctggg 3180 agtctcccga caccacccgc gcaggtgtgg acaccaattc ggccctatac catcccaaat 3240 ggatcgttcg cggt 3254 //