ID U27809; SV 1; linear; genomic RNA; STD; VRL; 3057 BP. XX AC U27809; XX DT 06-JUL-1995 (Rel. 44, Created) DT 12-DEC-2007 (Rel. 94, Last updated, Version 4) XX DE Peanut bud necrosis virus segment S non-structural protein and nucleocapsid DE protein genes, complete cds. XX KW . XX OS Peanut bud necrosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-3057 RX DOI; 10.1007/BF01718590. RX PUBMED; 8629953. RA Satyanarayana T., Mitchell S.E., Reddy D.V., Brown S., Kresovich S., RA Jarret R., Naidu R.A., Demski J.W.; RT "Peanut bud necrosis tospovirus S RNA: complete nucleotide sequence, genome RT organization and homology to other tospoviruses"; RL Arch. Virol. 141(1):85-98(1996). XX RN [2] RP 1-3057 RA Mitchell S.E.; RT ; RL Submitted (26-MAY-1995) to the INSDC. RL Sharon Mitchell, PGRCU, USDA/ARS, University of Georgia Experiment Station, RL Griffin, GA 30233, USA XX DR MD5; fcbb80bc673e8cc061d4dba197c7bfd9. DR EuropePMC; PMC2828552; 20151164. DR EuropePMC; PMC2841200; 20305786. DR EuropePMC; PMC2999430. DR EuropePMC; PMC4178757; 25100845. DR EuropePMC; PMC4326804; 25540203. XX FH Key Location/Qualifiers FH FT source 1..3057 FT /organism="Peanut bud necrosis virus" FT /segment="S" FT /mol_type="genomic RNA" FT /db_xref="taxon:40687" FT repeat_region 1..10 FT /rpt_type=INVERTED FT CDS 67..1386 FT /codon_start=1 FT /product="non-structural protein" FT /note="ORF1; NSs" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q84402" FT /protein_id="AAB04144.1" FT /translation="MSTARSAASEFVKSYGTRDNRAINDCYSVFSGEGVNFLNLFMHNN FT AGIKSAFSINDLGRNEDIKIHEAEVIDSCHDYHYFEKFGLDIIFCEHEMSLVVGKPGVK FT NTGCKFTMHNQIFNPNSDTLALTPGTVSENEFYEKIKIRSNGLLPSGWYQDECCKNNFY FT IATNGDLTLDYGFSVMGKTTSYWRESISREKILSVKQKCLPDNTVPTNRLLSTSTVKGI FT QLGSELAPDTTVILSLKQNLNVDLKSQYRVSFHGIQEEGAFARTFCVPFENKSRMICLY FT AKTVVDNSNERTTLIIKVVTKTIESHLVIPIRNHINCVKKIGARIGLVDSIESDPNYNQ FT MIVKELLGVHTQFAINLSLVIKKPIIVFKMYDIELNNNHIDVYGRILNYQTDAEGNAYF FT LSKTLEVLPKSLSTLSYLGSIAPIQWEESLEHQHFIVKPE" FT misc_feature 883..891 FT /note="encodes potential N-glycosylation site" FT misc_feature 1132..1140 FT /note="encodes potential N-glycosylation site" FT misc_feature 1387..2159 FT /note="intergenic region" FT misc_feature 1590..1924 FT /note="hairpin region" FT CDS complement(2160..2990) FT /codon_start=1 FT /product="nucleocapsid protein" FT /note="ORF2" FT /db_xref="GOA:Q84403" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q84403" FT /protein_id="AAB04145.1" FT /translation="MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDTNKN FT LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM FT ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT FT GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL FT LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL" FT misc_feature 2424..2432 FT /note="encodes potential N-glycosylation site" FT repeat_region 3048..3057 FT /rpt_type=INVERTED XX SQ Sequence 3057 BP; 1007 A; 544 C; 517 G; 989 T; 0 other; agagcaatcg gggcatctaa taattctaga aaaacaacga tatactcaag aaatactatt 60 tcaggcatgt caaccgcaag gagtgctgct tctgaattcg tcaaaagcta tggcacaaga 120 gacaacagag caatcaatga ttgctattct gtcttctctg gagaaggtgt caactttctc 180 aatttgttca tgcataacaa tgcaggtatt aaatctgcat tcagcatcaa cgatttgggc 240 aggaatgagg atatcaaaat ccatgaagct gaagttattg attcatgcca tgattatcat 300 tactttgaga agtttgggtt agacataata ttctgtgagc atgaaatgag cctggttgtg 360 gggaaaccag gtgtgaagaa tacaggctgc aaattcacaa tgcacaacca aattttcaat 420 cctaattctg atacacttgc tttaactcct ggaacagtct cagaaaatga gttctatgaa 480 aaaatcaaaa taagatcaaa tggactactt ccctctggat ggtatcaaga tgaatgctgt 540 aaaaacaact tttacatagc tacaaatgga gatttgactc ttgactacgg gttttctgtt 600 atgggaaaga caacatccta ttggagagaa agtatctcta gggagaagat tttgtctgtt 660 aagcagaagt gtttacctga taacactgtc cctaccaaca ggctcctatc tacatcaact 720 gtaaaaggta ttcagctagg atctgaacta gccccagaca ccacagtgat actatcactt 780 aagcaaaatc tgaacgttga cttaaaatct caataccgcg tttcgtttca tggcatccaa 840 gaggaaggtg cttttgcaag gactttctgt gttccttttg aaaacaaatc caggatgata 900 tgcctatacg caaaaactgt tgtggataac agtaatgaaa ggactactct gattataaag 960 gtagttacaa aaactattga atcccatcta gtcattccta tcaggaatca cataaattgt 1020 gtaaagaaaa ttggagccag gatagggctt gttgattcta ttgaaagtga tcctaactat 1080 aatcagatga ttgttaaaga gttattgggt gttcatactc aatttgctat caatttatcc 1140 ttggtcataa agaagccgat cattgtgttc aaaatgtatg atattgagtt gaacaacaat 1200 catatagacg tttatggaag gatcctgaat taccagacag atgcagaggg aaatgcctat 1260 ttcctttcaa aaacccttga agttcttccc aaatcacttt ccactctgag ttacttagga 1320 agcattgcac caattcaatg ggaggaatct ttggagcacc agcatttcat tgtgaagcca 1380 gagtaattca ggtttatgtc cttgttctac ttaagtttat tgtgtgcatg ttatttaata 1440 agcaactaat aagtgtttgc ttgtttaaag tatataagta ttttaagtat tacagtataa 1500 tgttatcaaa tataagttta tataaataaa ataagctaat actaataagt gtaagtttaa 1560 taatcgaata taaattaaat aaataaaaac ccataaaaat caaaaaacgg aaaaccaaaa 1620 agacctcgaa agaggcaatc ttggcttaac tgctttaatt aaactcattt atcaaaagtt 1680 ttttacacgg aattcatgtt tcatggaatt tgagatcttt cgagtatttt aatctcattt 1740 atcaacttac atgatttaat caacatgagg aactatactg aatttggatc ccttgagtcc 1800 tgtaaattaa tccgagctag ataatcaatt ccagaaataa agcaaatcta tgttcaagac 1860 cggccaatcg gttgcctccg aagaggtctt ttttggtttt ttgatttttt gatttttttg 1920 ggttttttgt tatttattta ttttacttat taattattat ttggtttatt tattatctta 1980 ctcttatatt tattttaaac acaaacacaa taacacaata agtaaagtaa catttaaatt 2040 taatacacaa tgtaaacaca taaagaactt ataaacacac aaaagagctt atattactta 2100 acaaccacac ataaacttag atacatatta acatgcataa acaccttata tgaaacaatt 2160 tacaattcca gcgaaggacc agcctttgaa ctcttcttct tagaatgttc accataatca 2220 tccattgaga gactggcact gaaagctttg tccatgtatt tgacttgttc atcatatttc 2280 ttgagtgaga tagagctggc tgttccaggg ttgctctcac tcaatagctt tacagctgat 2340 ttaaacattt cctctagttc atttttgaat tcaatctgtg aagcagaaag tactttggct 2400 actttgcaaa cctgttcata agtagaaaag ttcttaattc ctaatttctc tttcttcaca 2460 ttttgataat aagccagagg gaatataatt ggtgccagac ctgtcatgct agacaagaga 2520 ggtagaggac ctccaatgca gagcatcatc cttaaagcac atgtatcgaa agatgcaggg 2580 acatttaatc cataagctgc cactaatggt aattccatta ttttattgta catctcctgc 2640 ttagcagcat cattcttgct cttctcaacc atactagcca ttttggtcct gatgaaagct 2700 tctgtccttt tgaaggtcca gtcatctggc cctacatcag tatttgtagc aacaatagtt 2760 ttaccacaaa aaacatactt accactttta caagcagcaa agatctgctt cctgcacttc 2820 aaaatattca aacagtttgt aaaagttatt tcaagatttt tgttggtgtc atagaaagct 2880 ttaaagctaa atccgggagt ggaatcttct gtttcaattt caacatctgc agagccacca 2940 gccaaaagtt ctttgatttt cttctcggtg agttgcttga cgttagacat ggtgtttact 3000 ctggaaacgt ctagtatatt gactttgaat gaattttatt agcgcctcga ttgctct 3057 //