ID U23715; SV 1; linear; genomic RNA; STD; VRL; 3404 BP. XX AC U23715; XX DT 15-AUG-1995 (Rel. 44, Created) DT 24-JAN-1996 (Rel. 46, Last updated, Version 4) XX DE Citrus leaf rugose ilarvirus putative viral replicase gene, complete cds. XX KW . XX OS Citrus leaf rugose virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-3404 RX PUBMED; 8847536. RA Scott S.W., Ge X.; RT "The nucleotide sequence of citrus leaf rugose virus RNA 1"; RL J. Gen. Virol. 76:3233-3238(1995). XX RN [2] RP 1-3404 RA Scott S.W.; RT ; RL Submitted (28-MAR-1995) to the INSDC. RL Simon W. Scott, Plant Pathology and Physiology, Clemson University, Long RL Hall, Clemson, SC 29634-0377, USA XX DR MD5; 9594ff3bedaf6eb0c4ab4954b3632aad. XX CC NCBI gi: 924710 XX FH Key Location/Qualifiers FH FT source 1..3404 FT /organism="Citrus leaf rugose virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:37126" FT 5'UTR 1..73 FT CDS 74..3229 FT /codon_start=1 FT /note="putative viral replicase; NCBI gi: 924711" FT /db_xref="GOA:Q66108" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q66108" FT /protein_id="AAC49126.1" FT /translation="MDSFVASPSNVLRLDDILNDVVRRNAANASTDVGRLISDAAVNVV FT RRQVDLSPAKPLNVSFALTPEDQNSLRRDFPGRELQFRNSASSSHAYAAAHRVCETDYI FT YSRFQTENTTIIDIGGNFSTHAKMGRSNVHSCCPILDVHDGERYTDRFMSIAGALEKQP FT DRELNLNYCDHKFEDCDVKAPWAMAIHSISDIPITTVVKHCFRRGVKKLIASIMDGSND FT VNRHRSFIPRLNVRWEVETIDKERKISFHFVDAPGLSYTHNFNVLMQYMTCNQVIVTGK FT AAYRVERVADLSGVFIVEITLASTNSHRLDLIPMRDVSCAWLSSLRRKTLVRVAIPQLK FT NSWEIKHVIMDTDFVRRVAEVSFRQYKPDTPLENLVQSVATMISSASNHCVINGVTMQT FT GSPVMIDYYVPLAVTFVAFARSRYRMIKPGMEMVRQRGVSIVDPNADVDFVNVKGEAIA FT TKSMVKTAIRGLLFPTRTKVDDNTVLLYTCPILESIVDEIKTALGWDCWATDDAVIQSL FT PSFYKMEDVFEVTSDHFCLSHTLNVDYWLEGLYDSYDELRQAHKIRLAQEEARKTKVEN FT ALLKIAEVLESDTCPSGLLPLKLEPLVSSLIEKKTDEIITKPQCSDASKPHINPHADAI FT KEAISYYNELEVVATRNLRGVGDYLFWRQKSNYASVWGADDSRCVLEPLSRRWFNRQNR FT TEYERGMSVDGFVRLAWKDGDLTPDTWASISKYNVLLFDSTCVFDARSRLLPGLNKALV FT MDCKASVIIEDGVAGCGKTTSLLKQAKIESDMLLSANRETARDARESGAIPDVLKYRVR FT TLDSYLMLKKWFTADRLLVDECFLVHSGIIYAAATLGQVKEIIAFGDTKQIPFVSRIPT FT FSLKHPSIRGKLKPKTITYRCPRDATAVLSEKFYETNVKTFNPTSSSLSLIDISSSMEI FT PAEKDTLYIMHTQADKCAMLRHPGINPDNVMTTHEAQGKTFNHVILVRLSKPTNLLYSG FT KMPDAGPSHNLVGLSRHKSTLRYYSVYADDPDDMIATGIRWSKTLDEQALARYRAGDLV FT SLS" FT 3'UTR 3230..3404 XX SQ Sequence 3404 BP; 927 A; 672 C; 791 G; 1014 T; 0 other; gtattgtgaa acgttatttc gttcacgacc cggattaatc agttattctg agtatatacc 60 cgttagttgc tcaatggatt catttgttgc ttcgccttca aatgtgcttc gtttagatga 120 tatcttaaat gatgttgtca gacgaaatgc cgctaatgcc tctaccgatg ttggtagatt 180 aattagcgat gccgccgtta acgtggttcg ccgacaggtg gatctcagtc cggccaagcc 240 cttaaacgtt tcgttcgcgt tgactcctga agatcagaat agtttaagga gagattttcc 300 aggtagggaa ttacaatttc gtaattctgc ttcctcttca cacgcatacg ctgctgcgca 360 tcgtgtatgc gagactgatt atatttactc cagatttcag accgagaata cgacgattat 420 tgatattgga ggtaatttca gtactcatgc caaaatgggt aggagtaatg ttcattcctg 480 ttgtccaatt ttggatgtcc acgatggtga gcggtatacc gacaggttta tgtcaattgc 540 cggtgcgctt gaaaaacaac ccgataggga gttaaatttg aattattgtg accataaatt 600 tgaagattgt gatgtcaagg cgccttgggc catggcaatt cactcaattt ccgatattcc 660 catcacgaca gtggtcaaac attgttttcg tagaggagtt aagaaattga tcgcttcaat 720 tatggatgga tccaatgatg ttaatcgcca ccgaagtttt attcctcgtc tcaatgttag 780 atgggaagtt gaaactattg ataaggagag gaaaatttct ttccattttg tcgatgctcc 840 tggtttgtca tacactcaca attttaatgt tttaatgcag tatatgactt gcaatcaagt 900 cattgttacc gggaaagccg cgtacagagt tgagcgcgta gctgacttga gtggagtgtt 960 tatcgttgaa ataacactcg catccactaa tagtcataga ttggatttga ttcccatgcg 1020 agatgtttct tgtgcatggt tgagttcatt gcgacgaaag actcttgtta gagtggccat 1080 tccgcagttg aaaaattctt gggagataaa acatgtgatt atggacacag atttcgtcag 1140 acgtgttgcc gaagtttcat tccggcaata caagcccgat acacccttgg agaacctagt 1200 tcagagcgtt gctactatga tttcatcagc atcgaatcac tgtgttatta atggtgttac 1260 gatgcaaact gggtctccag ttatgattga ttactacgta ccgttagccg tcacttttgt 1320 ggcttttgcg cgtagtaggt atcgcatgat caaaccaggg atggaaatgg tgaggcaacg 1380 aggagtgtcc attgtcgatc caaatgctga tgttgatttt gtcaacgtca aaggagaagc 1440 catcgccacc aaaagcatgg tgaaaacagc gattcgaggg cttctctttc cgaccagaac 1500 taaggtcgat gataataccg tcttgttata tacatgccca attcttgaat ccatcgtcga 1560 tgagataaaa accgccttag ggtgggattg ttgggcaacg gacgacgccg taattcagtc 1620 attaccttcc ttttataaga tggaagatgt ttttgaagtc acctcagacc atttttgctt 1680 aagtcatacc ttaaatgttg attattggtt ggagggactt tatgattcgt atgatgaatt 1740 acgacaggcg cataaaatca gacttgcgca agaggaagca aggaagacca aagttgagaa 1800 tgccttgtta aaaattgctg aggttttaga gtctgatact tgtcctagtg gtttattgcc 1860 tctcaaactt gaaccgttag taagcagttt gattgagaag aagaccgatg agatcattac 1920 caagcctcaa tgctctgatg catccaagcc ccatatcaat cctcatgcgg atgctatcaa 1980 ggaagccata tcatactaca acgaattgga ggttgtagcg acgcgcaatt taagaggtgt 2040 gggagattac cttttttggc gtcagaaatc gaactatgcc agcgtgtggg gcgctgacga 2100 ttcaagatgt gtgttggagc cattatcccg cagatggttc aaccggcaaa accgaactga 2160 atatgaaaga ggcatgtcag ttgatggttt tgttcgacta gcctggaagg atggggattt 2220 aacacctgat acctgggcgt caatttccaa atacaatgtg ttattgttcg attccacatg 2280 tgtgtttgat gccagatcac gactgttacc aggcttgaat aaagccttgg taatggattg 2340 taaagcttcc gtgatcattg aggacggggt ggctggatgt ggaaaaacca cgtctctgtt 2400 gaagcaggcc aaaattgagt ctgatatgtt gttatctgcc aacagagaaa ctgcgagaga 2460 tgcccgcgag agcggagcga ttccagatgt tttgaagtac cgagtgagaa cattagattc 2520 ttacttgatg ttaaagaaat ggttcaccgc cgaccgttta ttggtcgatg aatgtttctt 2580 agttcattct gggatcattt atgccgccgc caccttggga caagtgaagg agataattgc 2640 ttttggtgat actaagcaga ttccatttgt ctcgcgtatc ccaactttct cgttgaagca 2700 tccgtccatc cgaggaaagt tgaagcccaa aaccataact taccgatgtc cacgggatgc 2760 cacagctgtt ttgagtgaga agttttatga aactaatgtg aaaacattta atccaacttc 2820 ctcctcatta tcgctgatag acattagttc cagcatggaa atcccagcag aaaaggatac 2880 gttatatatt atgcacacac aagctgataa gtgtgctatg cttcgtcatc caggtatcaa 2940 tccggataat gttatgacta ctcatgaagc tcaagggaaa acgtttaatc acgtgatttt 3000 agtacgattg agtaagccga ccaatttatt gtattccggg aaaatgcccg atgctggtcc 3060 ttcacacaat ttagttggtt tgtcacgaca taaatccacg ttacgatact atagtgtcta 3120 tgctgatgat ccagatgaca tgattgccac tggaattcgt tggtctaaaa ctttagacga 3180 acaagctcta gctcgttatc gagctggtga tttagtctca ctttcgtgag ctgatgaagg 3240 gtcctccggg atgtgctcag cacttaacct aagtcaagtt catatgccca cctttgctgc 3300 tccgggtgga tgcttcgtgc aaatgctatg aatgcctacg tgtacaaacg tagatgccta 3360 tattttctct cctgagaaaa tatagatgcc tcccaaggag atgc 3404 //