ID U22967; SV 1; linear; genomic DNA; STD; VRL; 5132 BP. XX AC U22967; XX DT 03-JAN-1996 (Rel. 46, Created) DT 11-SEP-2007 (Rel. 93, Last updated, Version 4) XX DE Barbarie duck parvovirus REP protein (rep) and three capsid protein VP (vp) DE genes, complete cds. XX KW . XX OS Muscovy duck parvovirus OC Viruses; Parvoviridae; Parvovirinae; Dependoparvovirus. XX RN [1] RP 1-5132 RX DOI; 10.1006/viro.1995.1514. RX PUBMED; 7571426. RA Zadori Z., Stefancsik R., Rauch T., Kisary J.; RT "Analysis of the complete nucleotide sequences of goose and muscovy duck RT parvoviruses indicates common ancestral origin with adeno-associated virus RT 2"; RL Virology 212(2):562-573(1995). XX RN [2] RP 1-5132 RA Zadori Z., Stefancsik R.; RT ; RL Submitted (17-MAR-1995) to the INSDC. RL Zoltan Zadori, Sanofi-Phylaxia, Research, Szallas u. 5., Budapest, 1107, RL Hungary XX DR MD5; c921bf055572a71d7af4c05191c37af3. DR EuropePMC; PMC115897; 11222696. DR EuropePMC; PMC2805842; 20076793. DR EuropePMC; PMC4915054; 27329377. DR EuropePMC; PMC5680767; 29121936. DR EuropePMC; PMC6122767; 30176903. XX FH Key Location/Qualifiers FH FT source 1..5132 FT /organism="Muscovy duck parvovirus" FT /host="Cairina moschata" FT /lab_host="Cairina moschata" FT /strain="FM" FT /mol_type="genomic DNA" FT /db_xref="taxon:37325" FT repeat_region 1..457 FT /function="replication origin" FT /rpt_type=INVERTED FT /note="inverted terminal repeat; ITR" FT regulatory 474..478 FT /note="p9" FT /regulatory_class="TATA_box" FT gene 548..2431 FT /gene="rep" FT CDS 548..2431 FT /codon_start=1 FT /gene="rep" FT /product="REP protein" FT /function="regulator of replication and gene expression" FT /db_xref="GOA:Q65443" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR014835" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q65443" FT /protein_id="AAA83224.1" FT /translation="MAFSRPLQISSDKFYEVIIRLPSDIDQDVPGLSLNFVEWLSTGVW FT EPTGIWNMEHVNLPMVTLADKIKNIFIQRWNQFNQDETDFFFQLEEGSEYIHLHCCIAQ FT GNVRSFVLGRYMSQIKDSILRDVYEGKQVKIPDWFSITKTKRGGQNKTVTAAYILHYLI FT PKKQPELQWAFTNMPLFTAAALCLQKRQELLDAFQESEMNAVVQEDQASTAAPLISNRA FT AKNYSNLVDWLIEMGITSEKQWLTENKESYRSFQATSSNNRQVKAALENARAEMLLTKT FT ATDYLIGKDPVLDITKNRIYQILKLNNYNPQYVGSVLCGWVKREFNKRNAIWLYGPATT FT GKTNIAEAIAHAVPFYGCVNWTNENFPFNDCVDKMLIWWEEGKMTNKVVESAKAILGGS FT AVRVDQKCKGSVCIEPTPVIITSNTDMCMIVDGNSTTMEHRIPLEERMFQIVLSHKLEG FT NFGKISKKEVKEFFKWANDNLVPVVSEFKVPTNEQTKLTEPVPERANEPSEPPKIWAPP FT TREELEEILRASPELFASVAPLPSSPDTSPKRKKTRGEYQVRCAMHSLDNSMNVFECLE FT CERANFPEFQSLGENFCNQHGWYDCAFCNELKDDMNEIEHVFAIDDMENEQ" FT gene 2450..4648 FT /gene="vp" FT CDS 2450..4648 FT /codon_start=1 FT /gene="vp" FT /product="capsid protein VP" FT /function="structural protein" FT /number=1 FT /db_xref="GOA:Q65444" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR013607" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:Q65444" FT /protein_id="AAA83225.1" FT /translation="MSTFLEKFEDWYETAAASWRHLKAGAPKPKSNQQSQSVSTDRKPQ FT RKDNNRGFVLPGYKYVGPGNGLDKGPPVNKADSVALEHDKAYDQQLKAGDNPYIKFKHA FT DQEFIDNLQGDTSFGGNLGKAVFQAKKRILEPLGLVEEPVNMAPAKKSSGKLTDHDPIV FT KKPKLSEENSPSPSNSGGEASAAATEGSEPVAAPNMAEGGSGAMGDSAGGADGVGNASG FT NWHCDSQWLGDTVITKTTRTWVLPSYNNHMYQAITSGTNPDSNTQYAGYSTPWGYFDFN FT RFHCHFSPRDWQRLINNHWGIRPKALKFKIFNVQVKEVTTQDQTKTIANNLTSTIQIFT FT DNEHQLPYVLGSATEGTMPPFPSDVYALPQYGYCTMHTNQSGARFNDRSAFYCLEYFPS FT QMLRTGNNFEFSFEFEEVPFHSMFAHSQDLDRLMNPLLDQYLWNFSEVNGGRNAQFKKA FT VKGAFGAMGRNWLPGPKLLDQRVRAYSGGTDNYANWSIWSKGNKVFLKDREYLLQPGPV FT ATTHTEDQASSVPAQNIIGIAKDPYRSGSTLAGISDIMVTDEQEIAPTNGVGWRPYGLT FT VTNEQNTTTAPTNAELEVLGALPGMVWQNRDIYLQGPIWAKIPKTDGKPHPSPNLGGFG FT LHNPPPQVFIKNTPVPADPPLEYVNQKWNSYITQYSTGQCTVEMVWELRKENSKRWNPE FT IQFTSNFGNRTSTMFAPNETGGYVEDRLIGTRYLTQNL" FT CDS 2885..4648 FT /codon_start=1 FT /gene="vp" FT /product="capsid protein VP" FT /function="structural protein" FT /number=2 FT /db_xref="GOA:Q65445" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:Q65445" FT /protein_id="AAA83226.1" FT /translation="MAPAKKSSGKLTDHDPIVKKPKLSEENSPSPSNSGGEASAAATEG FT SEPVAAPNMAEGGSGAMGDSAGGADGVGNASGNWHCDSQWLGDTVITKTTRTWVLPSYN FT NHMYQAITSGTNPDSNTQYAGYSTPWGYFDFNRFHCHFSPRDWQRLINNHWGIRPKALK FT FKIFNVQVKEVTTQDQTKTIANNLTSTIQIFTDNEHQLPYVLGSATEGTMPPFPSDVYA FT LPQYGYCTMHTNQSGARFNDRSAFYCLEYFPSQMLRTGNNFEFSFEFEEVPFHSMFAHS FT QDLDRLMNPLLDQYLWNFSEVNGGRNAQFKKAVKGAFGAMGRNWLPGPKLLDQRVRAYS FT GGTDNYANWSIWSKGNKVFLKDREYLLQPGPVATTHTEDQASSVPAQNIIGIAKDPYRS FT GSTLAGISDIMVTDEQEIAPTNGVGWRPYGLTVTNEQNTTTAPTNAELEVLGALPGMVW FT QNRDIYLQGPIWAKIPKTDGKPHPSPNLGGFGLHNPPPQVFIKNTPVPADPPLEYVNQK FT WNSYITQYSTGQCTVEMVWELRKENSKRWNPEIQFTSNFGNRTSTMFAPNETGGYVEDR FT LIGTRYLTQNL" FT CDS 3044..4648 FT /codon_start=1 FT /gene="vp" FT /product="capsid protein VP" FT /function="structural protein" FT /number=3 FT /db_xref="GOA:Q65446" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:Q65446" FT /protein_id="AAA83227.1" FT /translation="MAEGGSGAMGDSAGGADGVGNASGNWHCDSQWLGDTVITKTTRTW FT VLPSYNNHMYQAITSGTNPDSNTQYAGYSTPWGYFDFNRFHCHFSPRDWQRLINNHWGI FT RPKALKFKIFNVQVKEVTTQDQTKTIANNLTSTIQIFTDNEHQLPYVLGSATEGTMPPF FT PSDVYALPQYGYCTMHTNQSGARFNDRSAFYCLEYFPSQMLRTGNNFEFSFEFEEVPFH FT SMFAHSQDLDRLMNPLLDQYLWNFSEVNGGRNAQFKKAVKGAFGAMGRNWLPGPKLLDQ FT RVRAYSGGTDNYANWSIWSKGNKVFLKDREYLLQPGPVATTHTEDQASSVPAQNIIGIA FT KDPYRSGSTLAGISDIMVTDEQEIAPTNGVGWRPYGLTVTNEQNTTTAPTNAELEVLGA FT LPGMVWQNRDIYLQGPIWAKIPKTDGKPHPSPNLGGFGLHNPPPQVFIKNTPVPADPPL FT EYVNQKWNSYITQYSTGQCTVEMVWELRKENSKRWNPEIQFTSNFGNRTSTMFAPNETG FT GYVEDRLIGTRYLTQNL" FT regulatory 4673..4678 FT /note="polyA2" FT /citation=[1] FT /regulatory_class="polyA_signal_sequence" FT repeat_region 4678..5132 FT /function="replication origin" FT /rpt_type=INVERTED FT /note="inverted terminal repeat; ITR" XX SQ Sequence 5132 BP; 1542 A; 1137 C; 1213 G; 1240 T; 0 other; ctcattggag ggttcgttcg ttcgaaccag ccaatcaggg gaggggggaa gtgacgtaag 60 ttccggtcac gtgcttccgg tcacgtgctt ccggtcatgt gacttccggt catgtgactt 120 ccggtgacgt gtctcctgtc acgtgacttc cggtgacgca cttcctttga tgacgtattt 180 ccggttgtca aggctgatcg ggcgcatgcg cccgatctgc catgaaaatt aaaccggaaa 240 tacgtcatca aaggaagtgc gtcaccggaa gtcacgtgac aggagacacg tcaccggaag 300 tcacatgacc ggaagtcaca tgaccggaag cacgtgaccg gaagcacgtg accggaactt 360 acgtcacttc ccccctcccc tgattggctg gttcgaacga acgaaccctc caatgagact 420 caaggacagc aggacttttt gcgcgccagg aaatggtgca atctaggaga gtgtataagg 480 agagcttttt ccggttgcat tcattcgttg ctctgctctc acagagaacg gacctcaggt 540 caggaaaatg gcattttcta ggcctcttca gatttcttct gacaaattct atgaagttat 600 catcaggcta ccctcggata ttgatcaaga tgtgcctggt ttgtctctta actttgtaga 660 atggctttct acgggggtct gggagcccac cggaatatgg aatatggagc atgtgaatct 720 ccccatggtt actctggcag acaaaatcaa gaacattttc atccagagat ggaaccaatt 780 caatcaggac gaaacggatt tcttctttca attggaagaa ggcagtgagt acatccatct 840 gcattgctgt attgcccagg ggaatgtccg atcttttgtt ctggggagat acatgtctca 900 aattaaagac tcaattctga gagatgtgta tgaagggaaa caggtaaaaa tcccggattg 960 gttttctata actaaaacca aacggggagg gcaaaataag accgtgactg ctgcttatat 1020 tctgcattac ctgattccta aaaaacaacc ggaattacaa tgggctttta ccaatatgcc 1080 ccttttcact gctgctgctt tatgcctcca aaagaggcaa gagttactgg atgcttttca 1140 ggaaagtgag atgaatgctg tagtgcagga ggatcaagct tcaactgcag ctccccttat 1200 ttccaacaga gcagcaaaga actatagcaa tctggttgat tggctcattg agatgggtat 1260 cacctctgaa aaacagtggc taactgaaaa taaagagagc taccggagct ttcaggctac 1320 atcttcaaac aacagacaag taaaagcagc acttgaaaat gcccgagcag aaatgctact 1380 aacaaaaact gccacagact atttgattgg aaaagaccca gttctggaca ttactaaaaa 1440 tcggatctat caaattctga agttgaataa ctataaccct caatatgtag ggagcgtcct 1500 atgcggatgg gtgaaaagag aattcaacaa aagaaatgcc atatggctct acggacctgc 1560 gaccaccgga aagaccaaca tagccgaggc tattgcccat gctgtaccct tctatggctg 1620 tgttaactgg actaatgaga acttcccatt taatgactgc gttgataaaa tgcttatatg 1680 gtgggaggag ggaaaaatga ccaataaagt agtggaatcc gcaaaagcga tactgggggg 1740 gtctgctgta cgagttgatc aaaagtgtaa ggggtctgtt tgtattgaac ctactcctgt 1800 aataattacc agtaatactg atatgtgcat gattgtggat ggaaattcta ctacaatgga 1860 acacagaatt cctttggagg aaagaatgtt ccagattgtt ctttcccata agctggaagg 1920 aaattttgga aaaatttcaa aaaaggaggt aaaagagttt ttcaaatggg ccaatgataa 1980 tcttgttcca gtagtttctg agttcaaagt ccctacgaat gaacaaacca aacttactga 2040 gcccgttcct gaacgagcga atgagccttc cgagcctcct aagatatggg ctccacctac 2100 tagggaggag ctagaggaga tattaagagc gagccctgag ctctttgctt cagttgctcc 2160 tctgccttcc agtccggaca catctcctaa gagaaagaaa acccgtgggg agtatcaggt 2220 acgctgtgct atgcacagtt tagataactc tatgaatgtt tttgaatgcc tggagtgtga 2280 aagagctaat tttcctgaat ttcagagtct gggtgaaaac ttttgtaatc aacatgggtg 2340 gtatgattgt gcattctgta atgaactgaa agatgacatg aatgaaattg aacatgtttt 2400 tgctattgat gatatggaga atgaacaata aaggtgattc aaaatagcta tgtctacttt 2460 tttagagaaa tttgaagact ggtatgagac tgcagccgca tcttggcggc atttgaaagc 2520 tggagccccc aagccaaaat caaaccagca atctcagtct gtgtctacag acagaaaacc 2580 ccaacgaaaa gacaataata ggggctttgt acttcctggc tataagtatg ttgggcctgg 2640 taacggcctt gataaagggc cacctgtcaa taaagcggac agcgtcgcgc ttgagcacga 2700 taaagcgtac gaccagcagc tcaaggcagg agacaacccc tatataaaat ttaagcacgc 2760 agatcaagaa tttatagata atctgcaagg tgatacctcc tttggaggca acctcggaaa 2820 agccgtattc caagctaaaa aaagaattct agagccttta ggcctagtag aagaacctgt 2880 aaacatggct cctgctaaaa agagtagtgg aaaactaaca gatcacgacc ctatagtaaa 2940 gaagcctaaa ttatctgaag aaaactctcc ttcacctagt aatagtggag gagaagcaag 3000 tgcagctgcc accgaaggct ccgaacctgt ggcagcacct aacatggcag agggaggaag 3060 cggagctatg ggcgactctg cagggggtgc cgatggagtg ggtaatgcct caggaaattg 3120 gcattgcgat tcccaatggc tgggagacac agtcattacc aagactacaa gaacctgggt 3180 cctgccaagc tacaacaacc acatgtacca agccatcaca agcggaacaa acccagactc 3240 aaatacccaa tatgctggat acagcacccc ctgggggtac tttgatttca acagattcca 3300 ctgccatttc tctccaagag actggcagag actcatcaac aaccattggg ggattagacc 3360 gaaagcactc aaattcaaga tattcaatgt gcaagttaaa gaagtcacga cgcaagacca 3420 gacaaagact attgctaaca accttacctc tacaatccag atattcacgg ataatgaaca 3480 ccagctgccc tatgttctgg gctcggccac ggaggggacg atgccaccgt tcccctcaga 3540 tgtgtatgcc ttgccccagt acggctactg cacaatgcac accaaccaga gtggagcgag 3600 attcaatgac agaagtgcct tctattgctt agagtacttc cccagtcaga tgctgagaac 3660 agggaataat tttgaattca gttttgagtt tgaagaagtt cccttccata gcatgttcgc 3720 tcattcacag gatttagaca ggctaatgaa tcctctccta gatcagtacc tgtggaattt 3780 ctctgaggtt aatggtggca ggaatgcaca gttcaaaaaa gctgtgaaag gagcatttgg 3840 tgcaatgggg agaaattggc ttccaggacc caaacttcta gaccaaaggg taagagcata 3900 cagtggagga acagataact atgcgaactg gtcaatctgg agtaaaggaa acaaagtttt 3960 tcttaaagac agagagtatc tcctgcaacc aggtccagta gctactacac atacagaaga 4020 tcaggcttcc agtgtaccgg ctcaaaacat aataggaatt gcaaaagacc cctacaggtc 4080 aggcagtact ctggcaggaa tttcagacat catggtaaca gatgagcaag aaatagcacc 4140 aactaacggt gtagggtgga gaccttatgg attgaccgta accaatgaac aaaacacaac 4200 aacagctcct acaaatgctg agctagaagt actgggagca ctacctggca tggtctggca 4260 gaacagagat atttacctgc agggtcctat atgggctaaa atacccaaaa cagatgggaa 4320 accccatcct tctccaaacc tgggaggttt tggtctccat aatccacctc cccaggtctt 4380 tattaaaaat actcctgttc ctgcagatcc tccactagag tatgtaaatc agaagtggaa 4440 ttcttacatt acacagtatt caacagggca gtgtactgta gaaatggtct gggaactcag 4500 aaaagaaaac tccaagagat ggaaccctga gatccaattt accagtaact ttggaaatag 4560 aacaagtact atgtttgctc caaatgagac tggaggctat gtagaagata ggctgattgg 4620 taccaggtat ttgactcaga atctgtaaat ttctgtattc ttttgatttt aaataaacca 4680 tttcctggcg cgcaaaaagt cctgctgtcc ttgagtctca ttggagggtt cgttcgttcg 4740 aaccagccaa tcaggggagg ggggaagtga cgtaagttcc ggtcacgtgc ttccggtcac 4800 gtgcttccgg tcatgtgact tccggtcatg tgacttccgg tgacgtgtct cctgtcacgt 4860 gacttccggt gacgcacttc ctttgatgac gtatttccgg ttgtcaaggc tgatcgggcg 4920 catgcgcccg atctgccatg aaaattaaac cggaaatacg tcatcaaagg aagtgcgtca 4980 ccggaagtca cgtgacagga gacacgtcac cggaagtcac atgaccggaa gtcacatgac 5040 cggaagcacg tgaccggaag cacgtgaccg gaacttacgt cacttccccc ctcccctgat 5100 tggctggttc gaacgaacga accctccaat ga 5132 //