ID U20621; SV 1; linear; genomic RNA; STD; VRL; 3082 BP. XX AC U20621; XX DT 18-MAY-1995 (Rel. 43, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 2) XX DE Blueberry leaf mottle virus segment RNA2 polyprotein gene, partial cds. XX KW . XX OS Blueberry leaf mottle virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3081 RX DOI; 10.1016/0168-1702(94)90051-5. RX PUBMED; 7975879. RA Bacher J.W., Warkentin D., Ramsdell D., Hancock J.F.; RT "Sequence analysis of the 3' termini of RNA1 and RNA2 of blueberry leaf RT mottle virus"; RL Virus Res. 33(2):145-156(1994). XX RN [2] RX PUBMED; 8046421. RA Bacher J.W., Warkentin D., Ramsdell D., Hancock J.F.; RT "Selection versus recombination: what is maintaining identity in the 3' RT termini of blueberry leaf mottle nepovirus RNA1 and RNA2?"; RL J. Gen. Virol. 75(Pt 8):2133-2137(1994). XX RN [3] RP 1-3082 RA Bacher J.W.; RT ; RL Submitted (02-FEB-1995) to the INSDC. RL Jeffery W. Bacher, Genetic Analysis, Promega Corporation, 2800 Woods Hollow RL Road, Madison, WI 53711-5399, USA XX DR MD5; a8d84ac96f8acc8ae3e67a1037314af8. XX FH Key Location/Qualifiers FH FT source 1..3082 FT /organism="Blueberry leaf mottle virus" FT /chromosome="segment RNA2" FT /host="Vaccinium coryumbosum" FT /lab_host="Chenopodium quinda" FT /mol_type="genomic RNA" FT /db_xref="taxon:38172" FT CDS <1..1674 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q65624" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q65624" FT /protein_id="AAA64608.1" FT /translation="PNMTGRASIPVQTNIRNSPRIVDGEEITPPRFTTCNSGLIADTSI FT AHVVQGWVPKDATKGRVLEAINLREDIATSDNLVKYEWLAKGLIHPDLKLRMTVGQNPF FT VGISIGICCDYFGRLSKYYEGDTALPIEVCNQLPNFVCPISEKSVFEFDLDMSLAGYNL FT FQTSKGFADPVLLVYIIDTNSLPASDEWVYTCEVCIKSALHATSVANKPILSLPHFFDG FT RLPLDLWRGPFSFELGRSSKRENHIGINFGSARVVSGTNTFYSFPAAYTQLLQSVGGIL FT HGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLPGCRIPTGGGPFSIRIQTPFQREQ FT IFNTGVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQEEGDPPPRPIGNVLLFNWATISE FT MTNLTRFQIPARLSDLVLPGQTVTMRRNALANLIRSCGFFRGRVTFVFQWTLNVAHIVP FT TATMQILTAVGRVGNAETNGSQILQSWIVPVSQVFEKEVEMDLTDYPGFNTSGGIGADH FT DQPYIDIACGNFPQIFYMNINVRVHPGFELYGRSITPLRI" FT misc_feature 108^109 FT /function="proteolytic cleavage site" FT /note="determined by Edman degradation sequencing of the FT N-terminus of the purified BBLMV coat protein" FT /citation=[1] FT /experiment="experimental evidence, no additional details FT recorded" FT mat_peptide 109..1671 FT /product="coat protein" FT /note="location of the coat protein gene was determined by FT amino acid sequencing of the N-terminus of purified BBLMV FT coat protein" FT /citation=[1] FT /experiment="experimental evidence, no additional details FT recorded" FT 3'UTR 1675..3081 FT /citation=[1] FT misc_feature 1695..3081 FT /note="similar to BBLMV segment RNA1 3'UTR region: GenBank FT Accession Number U20622" FT /citation=[1] FT /citation=[2] FT /experiment="experimental evidence, no additional details FT recorded" FT polyA_site 3082 XX SQ Sequence 3082 BP; 795 A; 623 C; 727 G; 937 T; 0 other; ccgaatatga ctggacgtgc atctattcct gttcagacta acattaggaa tagccccaga 60 attgtagatg gggaagaaat aacgcctcct cggtttacaa cgtgcaatag tggtctgata 120 gcagacacta gtatagcgca tgttgtgcag gggtgggtgc ccaaagacgc aacaaaaggc 180 cgtgttttag aggccattaa tttgcgtgaa gatatcgcta ctagtgataa tttagttaaa 240 tatgagtggc ttgccaaagg actcatacat ccagatttga agttgcgtat gactgtcggc 300 caaaatccct ttgttgggat atcgataggc atatgctgcg attactttgg gcgccttagt 360 aaatattatg agggcgacac tgctttacct atagaggtat gcaatcaatt gcccaatttt 420 gtttgcccaa tatcggagaa gagtgtcttc gagtttgatt tagatatgtc cctcgcggga 480 tataaccttt ttcaaacttc taaaggcttc gctgatccgg tattattagt gtacataata 540 gatactaatt ctttacccgc cagtgatgaa tgggtttaca catgtgaggt ttgtataaaa 600 tctgccttgc atgccacttc tgtggcaaat aaacccattc tatcgctacc acattttttt 660 gacggtcgtc tcccacttga cttgtggagg ggaccttttt cttttgagtt aggtagaagt 720 tccaaaaggg agaatcacat cggcatcaat tttggtagtg ctcgtgttgt ctctgggacc 780 aatacctttt attcttttcc tgctgcctat actcagcttt tacagagtgt aggtggtatt 840 ttacatggta ctgtcgttca aactggcagt aaggctatat cttgtgagat gtttcttatc 900 cttcaaccgg ataagaccgc ccacaattta gagcaggctc tccgccttcc tggttgtcgt 960 ataccaactg ggggtggacc attttctatt cgtatacaga ctcccttcca gcgagagcaa 1020 atttttaata ccggcgttca gctggtaatc tatgctgttg ggggtcctat gggagcacaa 1080 gctatatctg caccatatca atatatggtg catttctccc atatacaaga agagggggat 1140 cctccgcctc gtcctattgg caatgtgttg ctctttaatt gggccaccat ttctgaaatg 1200 acgaatctta cccggtttca gattccggcg cgattaagtg atctcgtgtt gccaggtcaa 1260 actgtcacca tgaggcgaaa tgctttagcg aatctgataa ggtcttgtgg gttcttccgg 1320 ggccgtgtta catttgtgtt ccaatggaca ttgaatgtag cacatattgt accaactgct 1380 acaatgcaaa ttttaacggc agttgggcgc gttggcaatg cggagactaa tggttcacaa 1440 atcctacaaa gttggattgt gcccgttagt caggtctttg agaaagaggt tgaaatggat 1500 ctcaccgatt atcccggttt taatacatct gggggaattg gtgctgacca tgatcagcct 1560 tacattgaca ttgcttgtgg taattttcca caaatattct atatgaatat caatgtgcgt 1620 gtacaccccg ggtttgagct ctatggtagg agtatcacac ccctacgcat ttagtatgct 1680 aagtgtgttt ataggaacta gaacccttaa gttctaggag ttggtctgtc ctctctgaca 1740 ggccttcaaa ggatagagaa tagctcgaac tctctgtaat acgagaggtc cggacctgta 1800 ggtcttcctg gcatataccc aggttttgag atagtagtaa actactcttc gatgtagcga 1860 atcgtcgtaa ataggacacc ctcctaaaac gaagccttaa ataggaactt gaaaaagttt 1920 cctttccact ttgtggagga tagtataagg gacggtggtg ccagcttgat gactgcttaa 1980 gagcaggagg ttgctcgtta accttacacg agctaggacg ttctagtaga gatgagacat 2040 ctacctcgaa aaacgtcaga attactatat gattcaaaag cgtggttttt ccaacgttaa 2100 ccaatggaaa ccaggtgcac ataggttagt tgtgctgatt tgctaccttt taagaaagga 2160 gattattctg gtgaaattcc agatctatct tagttttgtt gtttcagttt gattgcaata 2220 aacccacata aactgtcgtc attaggacgg cataccattg agctctttag ggcgcctctg 2280 gttccgtgaa atcggtatac gtgtgaagat tagggtttgc tcgaaccata gagagctagg 2340 ttgttggagc cgaactgagt ccaaccgcat ttgtcagttt tagatataac tgtccaaggt 2400 ctactgcttc cgagcctgaa aaaatcttaa agcgcccagg cgtccgtgac ttcacggcac 2460 tcggggacag agtttaggga aactctagaa aaattccctc gccttttagt tgtgtggccg 2520 tgatggacac aactctctct tctttctgag agtgtaccgc tgttttagta tctggtgatg 2580 atgtagtttt gaaactacca gagatgtctc agtggagaag cgtcttgcca aacgatattg 2640 gcttaaggtc tatgtgacga taatttgcta gtgtactcta gagaatgtgg ggtggcaccc 2700 acttcttgga tgagggccgg agatgaaaac cggggagtaa taaactccag ctagcggcat 2760 aggccgacca ccgtgaggga gctcacggcg caatttggac catttttaga cataaatggc 2820 catgttagtg tagcgctttg cgcatgttga atgataatga accatgcgtt gcagcgcatg 2880 cctttcgaga tcggatgtga ttaccgtgag aaaggggaaa caatgccaac atgttcaatt 2940 cgttgtacta tgttttcttt ctttttgtag actcctgtga ggattatcca acagcaggtt 3000 gtgccttcag taagcacaca aaaagatttc gcatttttct ttgtgttaga tagttttata 3060 tctataatgt ctttatttca ca 3082 //