ID U17389; SV 1; linear; genomic RNA; STD; VRL; 2309 BP. XX AC U17389; XX DT 18-MAY-1995 (Rel. 43, Created) DT 05-JUN-2011 (Rel. 109, Last updated, Version 3) XX DE Citrus variegation virus RNA 3 movement protein and coat protein genes, DE complete cds. XX KW . XX OS Citrus variegation virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-2309 RX PUBMED; 9049342. RA Scott S.W., Ge X.; RT "The complete nucleotide sequence of RNA 3 of citrus leaf rugose and citrus RT variegation ilarviruses"; RL J. Gen. Virol. 76(Pt 4):957-963(1995). XX RN [2] RP 1-2309 RA Scott S.W.; RT ; RL Submitted (21-NOV-1994) to the INSDC. RL Simon W. Scott, Plant Pathology & Physiology, Clemson University, 120 Long RL Hall, Clemson, SC 29634-0377, USA XX DR MD5; 4e901d6813b75d73ef835499d7845b6b. XX FH Key Location/Qualifiers FH FT source 1..2309 FT /organism="Citrus variegation virus" FT /segment="RNA 3" FT /lab_host="Citrus species" FT /mol_type="genomic RNA" FT /clone="pCVV26, pCVV28" FT /db_xref="taxon:37127" FT 5'UTR 1..354 FT CDS 355..1203 FT /codon_start=1 FT /product="movement protein" FT /function="cell to cell movement protein" FT /note="putative" FT /db_xref="GOA:Q66273" FT /db_xref="InterPro:IPR002538" FT /db_xref="UniProtKB/TrEMBL:Q66273" FT /protein_id="AAC54055.1" FT /translation="MALSNFKSISVEQKDFTSLMNEVCGVMREHVADSSTFRGCQPKEA FT LIKANSAWELVSKDFSVFATKWNRFTKKMINVSHRNIYLIYIPRILHDTSCTDRCMLVN FT AATMEKKPVGVLPMNKMFILKTGWPRSLRVKDVLNHKGIFLTHSFIAPTLPPDCSVGRW FT IPFWEEDFGLPMVYQKDVAASLSLRNEETVRDAISNDVAASLMNSLLERTLNAAKRACT FT TGLISSGEQPEMPDFTIEELPESDSGGMTANATGEKKSTVVSGNGVVETAMEAQSHNTP FT K" FT misc_feature 1204..1328 FT /note="intergenic region" FT CDS 1329..1982 FT /codon_start=1 FT /product="coat protein" FT /function="viral capsid protein" FT /note="putative" FT /db_xref="GOA:Q66274" FT /db_xref="InterPro:IPR002681" FT /db_xref="InterPro:IPR016405" FT /db_xref="UniProtKB/TrEMBL:Q66274" FT /protein_id="AAC54056.1" FT /translation="MSGNAIEINGRWYQPAPNSAPTRGRGGRRQPTARSRQWAQGLANV FT RRSQPQQLLVGSMPTNLPTWKSFPGEQWHEVSGYSFPDRWGSGTIAYMTLRSELSKIRT FT LHDTTKVYSVMIGFVCKSDGYAGFMDGFDVNNATGPVAPDRIRVKRGKYCAKQQVFPTG FT TTVSEVKANWNLVWDFDTAPATGAVHEISITKFYVSTTPLPGVKPPSNFLVVEE" FT 3'UTR 1983..2309 XX SQ Sequence 2309 BP; 603 A; 498 C; 541 G; 667 T; 0 other; gtattcaact gagcttaaat accctttcga gactaataga attcaatcaa tcgagtgcaa 60 gatcaattcc gaaattttct aataggcgtc agaaatttcg atttcccact acctactcaa 120 ctgtggattc agtggaagat ttccgatttg attaagcccg caagtttgtt aagaggtgga 180 gtcctcttct attagtcttg cgagaaagac acgtgtgtgc ttatccaccg tgtatttttg 240 aatactctcg acttgtacgg gaaagccctc acaaacgcta ttcctcttag tgttgggttc 300 tgttgaggag tactagctcg aaagaaactt cagaaatcgt tgaagtttat tatcatggca 360 ctttccaact ttaaaagcat ttctgttgag cagaaagatt ttacaagttt gatgaatgaa 420 gtctgtggag ttatgagaga acacgttgct gattcctcca ccttccgagg ttgtcaaccg 480 aaggaagcgt tgatcaaggc aaattccgct tgggagcttg tgtctaagga cttctccgtt 540 ttcgcgacga agtggaatag gtttacgaag aaaatgataa atgtttcgca taggaacatt 600 tatctaattt acattccacg cattttacat gatacttcat gcaccgatcg gtgtatgtta 660 gttaatgccg caacgatgga gaagaagccc gttggtgttc tgcccatgaa caaaatgttc 720 attttgaaga ctgggtggcc tcgttctttg cgcgtgaaag atgtcctaaa tcataaagga 780 attttcctca cgcattcttt cattgcacca acgttacctc ccgattgttc agtcgggaga 840 tggattcctt tttgggaaga ggatttcggt ttaccgatgg tctaccaaaa agatgtcgca 900 gcttctctga gtttaagaaa tgaagaaact gtgcgcgatg ccatttcaaa cgatgtggct 960 gccagtttga tgaattccct ccttgagagg acgttgaatg ctgcgaaacg cgcgtgtacc 1020 acaggtctga tttcttctgg tgagcaacca gaaatgcccg attttacaat cgaagagttg 1080 ccagaaagtg attctggtgg aatgaccgcc aatgctaccg gtgagaaaaa gtctactgtt 1140 gttagtggga atggtgtagt ggagactgcg atggaagcgc aatctcacaa tactccgaag 1200 tgataagtta ttaagtttcg tgggatggat acccttattt gggtcccccc gagactgctt 1260 gtccgggagg agatttgtct tgaagtctcc ttctccactt ttacgtccct ttctcccata 1320 acaacaaaat gtctggtaat gctattgaaa ttaatggtcg ctggtatcaa ccggcaccca 1380 atagtgcccc gacccgaggt cgtggaggtc gccgtcaacc tactgcccgt tctaggcaat 1440 gggctcaagg actggcgaac gttcgacggt cacaaccaca acagttgttg gtcggttcca 1500 tgcctactaa cttaccaacc tggaagtcat tcccaggtga gcaatggcat gaagtttctg 1560 ggtacagttt ccctgataga tggggttctg gtaccattgc ctacatgacc ctacgttcgg 1620 agctaagtaa aataagaaca ctccatgata ccaccaaagt gtattcggtg atgatagggt 1680 tcgtatgcaa atccgatgga tatgccgggt ttatggatgg tttcgatgtt aacaatgcca 1740 ctggacccgt cgctcctgat aggatccgtg tgaagagggg gaaatactgc gctaaacagc 1800 aagttttccc taccggaacc acggtttccg aagtgaaggc caattggaat ttggtctggg 1860 acttcgatac cgccccagca actggtgccg tgcatgaaat ttccataacg aaattttatg 1920 tttccactac acctcttcct ggtgtgaagc caccaagcaa tttcttggtt gttgaagaat 1980 gactacactc ggacgattgt ccgagtcaaa gtgtcatccc tttctgtcat tgcgaatgtt 2040 atgacaatgc ttgcggtaca ccttggtgtc ctgctaatgc caattgtttc catgaatttc 2100 atgaaaatta ttgatgacgt gttctttcat agaatctagc aaggagccct caggggtgca 2160 ctcagtgcct agtctacgct aagtctatat gcccaccttt gctactccgg gtggatgttc 2220 taagtgtata tagatgccta tatttgaaat aatatagatg cccaaactct ctctcatgga 2280 gagagaatgg atgcctccga aggagatgc 2309 //