ID   U16735; SV 1; circular; genomic DNA; STD; VRL; 1017 BP.
XX
AC   U16735;
XX
DT   17-NOV-1994 (Rel. 41, Created)
DT   21-FEB-2014 (Rel. 119, Last updated, Version 5)
XX
DE   Subterranean clover stunt C6 alphasatellite, complete sequence.
XX
KW   .
XX
OS   Subterranean clover stunt C6 alphasatellite
OC   Viruses; Alphasatellitidae; Nanoalphasatellitinae; Clostunsatellite.
XX
RN   [1]
RP   1-1017
RX   DOI; 10.1006/viro.1995.1094.
RX   PUBMED; 7886939.
RA   Boevink P., Chu P.W., Keese P.;
RT   "Sequence of subterranean clover stunt virus DNA: affinities with the
RT   geminiviruses";
RL   Virology 207(2):354-361(1995).
XX
RN   [2]
RP   1-1017
RA   Boevink P.C.;
RT   ;
RL   Submitted (28-OCT-1994) to the INSDC.
RL   Petra C. Boevink, C.S.I.R.O. Division of Plant Industry, GPO Box 1600,
RL   Canberra ACT 2601, Australia
XX
DR   MD5; 8f9b3452e5efe3b7522af78ba341cca4.
DR   EuropePMC; PMC6410307; 30720711.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1017
FT                   /organism="Subterranean clover stunt C6 alphasatellite"
FT                   /chromosome="component 6"
FT                   /host="Trifolium subterraneum L."
FT                   /lab_host="Trifolium subterraneum cv. Mt. Barker"
FT                   /isolate="F"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1458459"
FT   stem_loop       join(1005..1017,1..19)
FT                   /note="region of sequence and predicted structural
FT                   similarity with the conserved stem-loop sequence in the
FT                   intergenic region of the geminiviruses, which is the origin
FT                   of replication"
FT   gene            48..905
FT                   /gene="SCSV6"
FT   CDS             48..905
FT                   /codon_start=1
FT                   /gene="SCSV6"
FT                   /product="possible replication associated protein"
FT                   /db_xref="GOA:Q87013"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q87013"
FT                   /protein_id="AAA68022.1"
FT                   /translation="MPTRQSTSWVFTLNFEGEIPILPFNESVQYACWQHERVGHDHLQG
FT                   FIQFKSRNTTLRQAKYIFNGLNPHLEIARDVEKAQLYAMKEDSRVAGPWEYGLFIKRGS
FT                   HKRKLMERFEEDGEEMKIADPSLYRRCLSRKMAEEQRCSSEWNYDLRPWQEEVMHLLEE
FT                   EPDYRTIIWVYGPAGNEGKSTFARHLSLKDGWGYLPGGKTQDMMHLVTAEPKNNWVFDI
FT                   PRVSSEYVNYGVIEQVKNRVMVNTKYEPCVMRDDNHPVHVIVFANVLPDLGKLSEDRIK
FT                   LIRC"
XX
SQ   Sequence 1017 BP; 312 A; 160 C; 265 G; 280 T; 0 other;
     cagtattacc gcacctcgct taccctcctc gcttccctgg gcccactatg cctactagac        60
     aaagcactag ttgggtgttc acacttaact ttgagggcga aattcctatt ttgcccttta       120
     atgaaagcgt tcagtacgct tgttggcagc atgagagagt gggacacgat catttacagg       180
     gatttataca atttaaatcc cgcaacacta cattgcgtca ggctaagtat atttttaatg       240
     gactgaatcc tcatctggaa attgctaggg atgtagagaa ggcgcaattg tacgcgatga       300
     aggaagatag tagagtagct ggtccctggg agtatgggtt gtttattaag agaggatcgc       360
     ataagcgtaa gctgatggag agatttgaag aagatggaga agagatgaaa attgctgatc       420
     cctctctcta taggcgttgt ctatcaagga agatggctga agaacaacgt tgttcttctg       480
     agtggaatta tgacttacgc ccttggcaag aagaagtgat gcatttgtta gaggaagaac       540
     cagattatag aacgataatc tgggtgtatg gacctgctgg taatgaaggc aaatctacat       600
     ttgcaagaca tctgtcattg aaagatggtt ggggttatct gcctggagga aagacacaag       660
     atatgatgca tcttgtgact gctgagccta agaataattg ggtatttgac atacccagag       720
     ttagttcaga gtatgtgaat tatggtgtaa tagaacaggt taagaatagg gtaatggtga       780
     atactaagta tgagccatgt gtaatgcggg atgataatca tcctgttcat gtaattgtgt       840
     ttgcaaatgt actcccagat ttgggaaaat taagtgaaga tagaataaaa ttaattcgtt       900
     gttgaaaact ctgcgaaggc agaagttata aaaaaaatgt gttttgagag aagtcccaca       960
     tcgggtagtt cgcgaaacag ggtgagggaa gcgagcaata taaggcgagg tgcgtat         1017
//