ID   U16734; SV 1; circular; genomic DNA; STD; VRL; 998 BP.
XX
AC   U16734;
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DT   17-NOV-1994 (Rel. 41, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 4)
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DE   Subterranean clover stunt virus coat protein (SCSV5) gene, complete cds.
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KW   .
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OS   Subterranean clover stunt virus
OC   Viruses; Nanoviridae; Nanovirus.
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RN   [1]
RP   1-998
RX   DOI; 10.1006/viro.1995.1094.
RX   PUBMED; 7886939.
RA   Boevink P., Chu P.W., Keese P.;
RT   "Sequence of subterranean clover stunt virus DNA: affinities with the
RT   geminiviruses";
RL   Virology 207(2):354-361(1995).
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RN   [2]
RP   1-998
RA   Boevink P.C.;
RT   ;
RL   Submitted (28-OCT-1994) to the INSDC.
RL   Petra C. Boevink, C.S.I.R.O. Division of Plant Industry, GPO Box 1600,
RL   Canberra ACT 2601, Australia
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DR   MD5; da7a7710fdb5d37e36dc21f40fdeec16.
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FH   Key             Location/Qualifiers
FH
FT   source          1..998
FT                   /organism="Subterranean clover stunt virus"
FT                   /chromosome="component 5"
FT                   /host="Trifolium subterraneum L."
FT                   /lab_host="Trifolium subterraneum cv. Mt. Barker"
FT                   /isolate="F"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:36772"
FT   stem_loop       join(988..998,1..17)
FT                   /note="region of sequence and predicted structural
FT                   similarity with the conserved stem-loop sequence in the
FT                   intergenic region of the geminiviruses, which is the origin
FT                   of replication"
FT   CDS             367..876
FT                   /codon_start=1
FT                   /gene="SCSV5"
FT                   /note="coat protein"
FT                   /db_xref="GOA:Q87012"
FT                   /db_xref="InterPro:IPR006753"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q87012"
FT                   /protein_id="AAA68021.1"
FT                   /translation="MVAVRWGRKGLRSQRRKYSRIAYKPPSSKVVSHVESVLNKRDVTG
FT                   AEVKPFADGSRYSMKKVMLIATLTMAPGELVNYLIVKSNSPIANWSSSFSNPSLMVKES
FT                   VQDTVTIVGGGKLESSGTAGKDVTKSFRKFVKLGSGISQTQHLYLIIYSSDAMKITLET
FT                   RMYIDV"
XX
SQ   Sequence 998 BP; 270 A; 147 C; 253 G; 328 T; 0 other;
     tagtattacc ccgtgccggg gtcagagaca tttgactaaa tattgacttg gaataatagc        60
     ccttggatta gatgacacgt ggacgctcag gatctgtgat gctagtgaag cgcttaagct       120
     gaacgaatct gacggaagag cgtcatggtc cacatgtcta aagaataatg ctttacagct       180
     gtattgattt gactttacgc gctttacttt aattgcttta agtaaagtaa gatgctttac       240
     tttgctcgcg acgaagcaaa gtgattgtag ctgcagaaat tgatgcttta attaccgggt       300
     aacacggttt gattgtgggt ataaatatgt tctgttcgtt ttcttcgttg tcattttaca       360
     acgaagatgg ttgctgttcg atggggaaga aagggtctga ggtctcaaag gagaaaatat       420
     tcgcgaattg cttacaaacc tccttcgtct aaggttgtaa gtcatgtgga gtctgttctg       480
     aataagagag atgttactgg agcggaggtt aagccattcg ctgatggttc aaggtatagt       540
     atgaagaagg taatgttgat tgcaacatta actatggctc ctggagaatt agttaattat       600
     cttattgtga agagtaattc gcctattgcg aattggagtt cgtctttcag taatccttcg       660
     ttgatggtga aagagtctgt tcaagataca gttacgattg ttggaggagg aaagcttgag       720
     tcttctggta ctgctggtaa agatgtaact aagtctttta ggaagtttgt taagctgggt       780
     tcaggtatta gtcagaccca gcatttgtat ttaattattt attccagtga tgcgatgaag       840
     atcacactgg agacgagaat gtatattgat gtataattgt gatgattaat gaataaagag       900
     ttgtttttat tctttgaatt actccgcgaa gcggtgtgtt atgtttttgt tggagacata       960
     tgacgtcata tgtctccgcg acaggctggc acggggct                               998
//