ID   U16733; SV 1; circular; genomic DNA; STD; VRL; 1002 BP.
XX
AC   U16733;
XX
DT   17-NOV-1994 (Rel. 41, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 4)
XX
DE   Subterranean clover stunt virus (SCSV4) gene, complete cds.
XX
KW   .
XX
OS   Subterranean clover stunt virus
OC   Viruses; Nanoviridae; Nanovirus.
XX
RN   [1]
RP   1-1002
RX   DOI; 10.1006/viro.1995.1094.
RX   PUBMED; 7886939.
RA   Boevink P., Chu P.W., Keese P.;
RT   "Sequence of subterranean clover stunt virus DNA: affinities with the
RT   geminiviruses";
RL   Virology 207(2):354-361(1995).
XX
RN   [2]
RP   1-1002
RA   Boevink P.C.;
RT   ;
RL   Submitted (28-OCT-1994) to the INSDC.
RL   Petra C. Boevink, C.S.I.R.O. Division of Plant Industry, GPO Box 1600,
RL   Canberra ACT 2601, Australia
XX
DR   MD5; 6d66409efc804532d78e94cf4c6d271a.
DR   EuropePMC; PMC6410307; 30720711.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1002
FT                   /organism="Subterranean clover stunt virus"
FT                   /chromosome="component 4"
FT                   /host="Trifolium subterraneum L."
FT                   /lab_host="Trifolium subterraneum cv. Mt. Barker"
FT                   /isolate="F"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:36772"
FT   stem_loop       join(992..1002,1..17)
FT                   /note="region of sequence and predicted structural
FT                   similarity with the conserved stem-loop sequence in the
FT                   intergenic region of the geminiviruses, which is the origin
FT                   of replication"
FT   CDS             344..805
FT                   /codon_start=1
FT                   /gene="SCSV4"
FT                   /db_xref="GOA:Q87011"
FT                   /db_xref="InterPro:IPR008706"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q87011"
FT                   /protein_id="AAA68020.1"
FT                   /translation="MADWFHSALKTCTHVCDFSDIKASSQQDFFCCDSMRGKLSEPRKV
FT                   LLVSCFVSFTGSFYGSNRNVRGQVQLGMQQDDGVVRPIGYIPIGGYLYHDDYGYYQGEK
FT                   TFNLDIESDYLKPDEDFWKRFTINIVNDKGLDDRCDVKCYVVHTMRIKV"
XX
SQ   Sequence 1002 BP; 294 A; 133 C; 240 G; 335 T; 0 other;
     tagtattacc ccgtgccggg atcagagaca tttgactaaa tgttgacttg gaataatagc        60
     ccttggatta gatgacacgt ggacgctcag gatctgtgat gctagtgaag cgcttaagct       120
     gaacgaatct gacggaagag cggacaaacg cacatggact atggcccact gctttattaa       180
     agaagtgaat gacagctgtc tttgcttcaa gacgaagtaa agaatagtgg aaaacgcgta       240
     aagaataagc gtactcagta cgcttcgtgg ctttataaat agtgcttcgt cttattcttc       300
     gttgtatcat caacgaagaa gttaagcttt gttctgcgtt ttaatggcgg actggtttca       360
     cagtgcgctt aagacatgta ctcatgtctg tgatttttca gatattaagg cgtcttcaca       420
     acaggatttc ttctgttgtg atagtatgcg aggtaaatta tctgaaccta ggaaggtgtt       480
     gttagttagt tgttttgtaa gttttactgg tagtttttat ggaagtaata ggaatgttag       540
     aggtcaagtt cagttgggta tgcagcaaga tgatggcgtt gttcgtccaa taggatatat       600
     tcctattggg ggttatttgt atcatgatga ttatggatat tatcaaggag agaagacgtt       660
     caatctggac atcgagtcag attatctgaa gcctgatgaa gatttttgga agagatttac       720
     aattaatatt gtaaatgata aaggattaga tgataggtgt gatgtaaaat gttatgtagt       780
     tcatacgatg cgtattaagg tgtaattgtt attatcaata aaagaatttt tattgttatt       840
     gtgttatttg gtaatttatg cttataagta attctatgat taattgtgaa ttaataagac       900
     taatgaggat aataattgaa tttgattaaa ttaactctgc gaagctatat gtctttcacg       960
     tgagagtcac gtgatgtctc cgcgacaggc tggcacgggg ct                         1002
//