ID U13917; SV 1; linear; mRNA; STD; VRL; 2790 BP. XX AC U13917; XX DT 21-SEP-1994 (Rel. 41, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 9) XX DE Barley stripe mosaic virus ND18 RNA gamma segment, complete sequence. XX KW . XX OS Barley stripe mosaic virus OC Viruses; Riboviria; Virgaviridae; Hordeivirus. XX RN [1] RP 1-2790 RX PUBMED; 8664501. RA Edwards M.C.; RT "Mapping of the seed transmission determinants of barley stripe mosaic RT virus"; RL Mol. Plant Microbe Interact. 8(6):906-915(1995). XX RN [2] RX DOI; 10.1016/0378-1119(88)90175-8. RX PUBMED; 3246352. RA Petty I.T., Hunter B.G., Jackson A.O.; RT "A novel strategy for one-step cloning of full-length cDNA and its RT application to the genome of barley stripe mosaic virus"; RL Gene 74(2):423-432(1988). XX RN [3] RX DOI; 10.1016/0042-6822(89)90601-6. RX PUBMED; 2763456. RA Petty I.T., Hunter B.G., Wei N., Jackson A.O.; RT "Infectious barley stripe mosaic virus RNA transcribed in vitro from RT full-length genomic cDNA clones"; RL Virology 171(2):342-349(1989). XX RN [4] RP 1-2790 RX DOI; 10.1016/0042-6822(87)90211-X. RX PUBMED; 3590624. RA Gustafson G., Hunter B., Hanau R., Armour S.L., Jackson A.O.; RT "Nucleotide sequence and genetic organization of barley stripe mosaic virus RT RNA gamma"; RL Virology 158(2):394-406(1987). XX RN [5] RP 1-2790 RA Edwards M.C.; RT ; RL Submitted (22-AUG-1994) to the INSDC. RL Edwards M. C., U.S. Dept. of Agriculture, Agricultural Research Service, RL Northern Crop Science Laboratory, 1307 18th Street North, Fargo, ND RL 58105-5677, USA XX DR MD5; 8de7ed692aff50d006f4d8c88ec17d5a. DR EuropePMC; PMC3915304; 24499968. DR RFAM; RF01072; TMV_UPD-PK3. DR RFAM; RF01075; TLS-PK1. XX FH Key Location/Qualifiers FH FT source 1..2790 FT /organism="Barley stripe mosaic virus" FT /chromosome="RNA gamma" FT /host="Hordeum vulgare" FT /lab_host="Hordeum vulgare" FT /strain="ND18" FT /mol_type="mRNA" FT /clone="pND18gamma42" FT /note="this sequence is derived from a single, full-length FT cDNA clone from which infectious transcripts can be made" FT /db_xref="taxon:12327" FT misc_difference 296 FT /replace="c" FT /note="conflict" FT /citation=[4] FT misc_difference 297 FT /replace="g" FT /note="conflict" FT /citation=[4] FT misc_difference 1269 FT /replace="t" FT /note="conflict" FT /citation=[4] FT misc_difference 1641..1643 FT /replace="" FT /note="conflict" FT /citation=[4] FT misc_difference 2129 FT /replace="g" FT /note="conflict" FT /citation=[4] FT misc_difference 2552^2553 FT /replace="aaaaa" FT /note="conflict" FT /citation=[4] FT misc_difference 2674 FT /replace="t" FT /note="conflict" FT /citation=[4] XX SQ Sequence 2790 BP; 802 A; 510 C; 647 G; 831 T; 0 other; gtatagcttg agcattaccg tcgtgtaatt gcaacacttg gcttgccaaa taacgctaaa 60 gcgttcacga aacaaacaac acttcggcat ggatgttgtg aagaaattcg ccgtcatgtc 120 agtgactgta gtagcaggtc ccgtccttac gctttcatca cctgtggtgg tgacgtttgg 180 aacaggctta attgccgtat ctttggtgaa acggttgcta caggaacaac cccgtgtaat 240 tgctcacgat cacgaacatt acccaggtgg ttctgagagc agttctagct cttgtgctac 300 cgcgcctatt ttacgtaatc tttcgcgaga tcagtgcgat tcagagaata ttggatgcag 360 ttctagcgcc tgttctccgt ctgaaattgt gaaagttaca aggcaggtag tgggagttga 420 acgtggtctt taccgggaca tttttcagga caacgaaatc ccatcagtca tggaagagaa 480 actgcagaaa ctcctttact ctgagggtga gaagattcga agacgttgcc aatttgaagc 540 atcaacgatg cactcacgca aagtaaaggt tccggaggta ggtactatcc cagatatcca 600 aacttggttc gatgctacgt ttcctggtaa ctccgttagg ttttctgatt tcgacggtta 660 tactgttgct acggaggaca ttaacatgga tgttcaggat tgtagactta agttcgggaa 720 gacttttcga ccttatgaat ttaaggaatc actgaaacca gtactgagga cagcaatgcc 780 agaaaaacga cagggtagtt tgattgaaag tgtgctggcc tttcgtaaaa gaaatttggc 840 tgcgcccaga ttacaaggag ctttgaatga atggcacaca attgagaatg tgctaacgaa 900 ggcgttaaag gtattcttct ttgaagattt aattgatcga acggatcact gcacttacga 960 gtcagcgctc agatggtggg ataaacaatc agtgacagct cgagcgcagc tcgtggcgga 1020 tcagcggagg ttatgtgatg ttgacttcac gacttataac ttcatgataa aaaatgatgt 1080 aaagccgaag ttagatctaa cacctcaagt tgaatatgca gctttgcaga ctgttgtata 1140 tcctgataag atagtcaatg ctttctttgg tccgatcata aaggagatta atgaacggat 1200 catcagagcg cttagacctc atgtggtctt taattctcgt atgactgctg atgaactgaa 1260 tgaaacagct gcctttttga cacctcataa gtacagagcc ttagagattg atttttcaaa 1320 atttgataaa tcaaagactg ggcttcatat caaagctgtc attggactct ataagctctt 1380 tggcctagat ggcctgttaa aagtgctctg ggaaaaatcg caatatcaga cttacgtgaa 1440 agatagaaac ttcggtctcg aggcatatct attgtatcag caaaagtcag gaaattgtga 1500 cacttacggt tcgaacacct ggtctgccgc cttggcgttg ttagattgtc ttcctttgga 1560 agatgcacat ttctgtgtat ttggtggtga tgattcattg atattgtttg atcagggata 1620 cataatttcc gacccatgcc ggcaacttgc cggtacttgg aatcttgaat gtaaagtgtt 1680 cgacttcaag taccccgcat tttgtggtaa atttctgctg tgcatagatg gaaaatatca 1740 atttgttcca gatgcggcaa aatttatcac aaaattaggt agaactgatg tgagagatgt 1800 agaagttttg agtgagattt atatctctat caatgacaat tacaaatctt acaaagactt 1860 taaggtgctt gatgctttgg ataaggcttt agtggataga tatcgatccc cttatagtgc 1920 tatttctgct ttggtttctt tatgttatca tatctttgac tttaataagt ttaagttgct 1980 gtttaattgt gaagggaaat ttgtggataa gaagctgaga aaagacttcg agtggtgaac 2040 tctaggtcct gatgtttaaa tctactgtat ttaccttcgc atgatggcta ctttctcttg 2100 tgtgtgttgt ggtaccttaa ctacaagtac ttactgtggt aagagatgtg agcgaaagca 2160 tgtatattct gaaacaagaa ataagagatt ggaactttac aagaagtatc tattggaacc 2220 gcaaaaatgc gccctgaatg gaatcgttgg acacagttgt ggaatgccat gctccattgc 2280 ggaagaggct tgtgatcaac tgccaatcgt gagtaggttc tgtggccaaa agcatgcgga 2340 tctgtatgat tcacttctga aacgttctga acaggagtta cttcttgaat ttctccagaa 2400 gaagatgcag gagctgaaac tttctcatat cgtaaaaatg gctaagcttg aaagtgaggt 2460 taacgcaata cgtaagtccg tagcttcttc ttttgaagat tctgttggat gtgatgattc 2520 ttcttccgtt tctaagtaaa aaaaaaaaaa aatgtttgat cagatcattc aaatctgatg 2580 gtgcccatca accatatgat gggagtgttt gcaagtccac tataatcgaa cttgaaaacg 2640 atgcctgaat tggaaaccat gaatcttaac ggactctgga gagaaaattt aggaattggt 2700 atgtaagcta caacttccgg tagctgcgtc acactttaag agtgtgcata ctgagccgaa 2760 gctcagcttc ggtcccccaa gggaagacca 2790 //