ID U03563; SV 1; linear; mRNA; STD; VRL; 4253 BP. XX AC U03563; S53233; XX DT 25-MAY-1994 (Rel. 39, Created) DT 27-APR-2002 (Rel. 71, Last updated, Version 5) XX DE Pea enation mosaic virus-2 65kDa viral replicase gene, complete cds. XX KW . XX OS Pea enation mosaic virus 2 OC Viruses; Riboviria; Tombusviridae; Calvusvirinae; Umbravirus. XX RN [1] RP 1-4253 RX PUBMED; 8423443. RA Demler S.A., Rucker D.G., de Zoeten G.A.; RT "The chimeric nature of the genome of pea enation mosaic virus: the RT independent replication of RNA 2"; RL J. Gen. Virol. 74(Pt 1):1-14(1993). XX RN [2] RX PUBMED; 8176385. RA Demler S.A., Borkhsenious O.N., Rucker D.G., de Zoeten G.A.; RT "Assessment of the autonomy of replicative and structural functions encoded RT by the luteo-phase of pea enation mosaic virus"; RL J. Gen. Virol. 75(Pt 5):997-1007(1994). XX RN [3] RP 1-4253 RA Demler S.A.; RT ; RL Submitted (17-NOV-1993) to the INSDC. RL Steven A. Demler, Botany and Plant Pathology, Michigan State University, RL Wilson Road, East Lansing, MI 48824-1312 USA XX DR MD5; 99a172166d12b07f3ff2e8e7d3a7e1a9. XX CC On Mar 8, 1994 this sequence version replaced gi:264097. XX FH Key Location/Qualifiers FH FT source 1..4253 FT /organism="Pea enation mosaic virus 2" FT /host="Pisum sativum" FT /lab_host="Pisum sativum" FT /mol_type="mRNA" FT /clone="pPER2d" FT /db_xref="taxon:193120" FT 5'UTR 1..20 FT CDS 21..929 FT /codon_start=1 FT /product="33kDa protein" FT /function="unknown" FT /db_xref="UniProtKB/TrEMBL:Q84693" FT /protein_id="AAA52183.1" FT /translation="MNCVARIKRWFTPDFTPGEGVKSRAQLERELDPTWALLVCQERAR FT RDADSIANEWYEGSMECNLLIPRPTTEDVFGPSIAPEPVALVEETTRSRAPCVDVPAEE FT SCKSAEIDPVDLAKFDSLHRRLLAEANPCREMVLWVPPGLPAERDVLPRARGVIMIPEV FT PASAHTLSVKVMEAVRLAQEVLASLAKRALEKRSTPTLTAQAQPEATLSGCDYPYQETG FT AAAAWITPGCIAMELRAKFGVCKRTPANLEMGSRVARELLRDNCVTCRETTWYTSAIAV FT DLWLTPTVVDLACGRRAADFW" FT CDS <815..2560 FT /codon_start=1 FT /product="65kDa viral replicase" FT /function="RNA-dependent RNA polymerase" FT /note="protein is expressed as a frameshift fusion with the FT first ORF on this sequence" FT /db_xref="GOA:Q84694" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q84694" FT /protein_id="AAA52184.1" FT /translation="LCHLQGDHVVHQCHCCGPVVDPDRRRPGLWSARGGFLVGAVLPRL FT GEDTSVRFDNLHPSIEVIKAARPRPTQRMSYQIDVVRPLGDFGVHNNSLVNLARGINER FT VFYTDNARTEPLKPKVPFPSSRELKTFRVTPWTMDRVVESYTGSQRTRYANARDSILSN FT PLSPKDARVKMFVKAEKINFTAKPDPAPRVIQPRDPRSNIVLAKYIKPLEPMLYKALGK FT LYKYPAVAKGFNAVETGEIIAGKWRCFKDPVVVGLDASRFDQHVSVEALQFTHAVYRGF FT IKSREFNNLLQMMYTNRGLGSAKDGFVRYKVKGRRMSGDMDTSLGNCVLMVLLTRNLCK FT VLGIPHELFNNGDDCIVFFDRCHLEKFNNAVKTYFADLGFKMKVEPPVDVLEKIEFCQT FT QPIYDGEKWRTVRCISSIGKDCSSVISWDQLEGWWNAIAQSGLAVCGGMPIYTSFYRWL FT ARAGKSGTKCQSHPLWKNEGLNWYRMGMDLSHEVNVTPQARLSFFAGFGISPPMQVAIE FT ALYDKLPPPSPHHGPPVKAVTQRVFTNYFTPESACVSMSTNEDNKSDFAVYGPVPTVMS FT LCAQC" FT misc_difference order(2593,2643,2771,2775) FT /note="Four single base changes at 2593 (C to T), 2643 FT (deletion), 2771 (T to A) and 2775 (T to A) between this FT sequence and that of ref (1) are sufficient to permit FT transcripts of the former to systemically infect its host." FT CDS 2763..3473 FT /codon_start=1 FT /product="26kDa protein" FT /function="unknown" FT /db_xref="InterPro:IPR006902" FT /db_xref="UniProtKB/TrEMBL:Q84695" FT /citation=[2] FT /protein_id="AAA52185.1" FT /translation="MAVGKYMTIIINVNNDERKQPEGATGSSVRRGDNKRTRGNKPRSH FT HPGSRERKGYNHPSPTPKNSKQGQLRTEAVQEHPKHGGTAFRRESGGSVHPSHPRRRAR FT RGGDMAPRQHPPPPRERRTKTETQAERRAQALSVLPTLLDCIGGLDLGPAEVLLHCHRA FT VRRQLRTGVQPIQPVPHVESTHRSSDPQLLESSTTCSANLQNDGAGRVIGGGIPTAIPE FT GSDVEQVCHASHYG" FT CDS 2797..3549 FT /codon_start=1 FT /product="27kDa protein" FT /function="unknown" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:Q84696" FT /citation=[2] FT /protein_id="AAA52186.1" FT /translation="MSITTSASNQKELLAALYGEVTIKELEETNLGVITPVRANEKVTI FT TPLLPPKTQSRVSSVLKRFRSTRNTGGLLSVEKVVVVFTPHIPDDVLGEVEIWLHDSIL FT PHLGSVGPRLKLKLSEGPKLLAFYPPYSIALGDSISGQPRSFSIVTELFEGNFAPGCSP FT FSLFLMWSPRIEAVTHNYLSRPPRALPICRTMVRDALSEVASQQQYLKGAMSNRYAMPL FT TTGDGQHRAMKGAPSALPPTGVCTQASK" FT 3'UTR 3550..4253 FT /note="Sequence in this regions is highly heterogenous FT between individual cDNA clones. May be indicative of a FT degenerate non-coding region." FT /citation=[2] FT /experiment="experimental evidence, no additional details FT recorded" FT misc_feature 3842..>4253 FT /note="In several alternate clones, a fifth ORF (15kDa) FT begins at nt 3842 and extends off the 3' terminus (ie no FT stop codon). No functional significance can be attributed FT to this ORF." XX SQ Sequence 4253 BP; 953 A; 1172 C; 1206 G; 922 T; 0 other; gggtatttat agagatcagt atgaactgtg tcgctaggat caagcggtgg ttcacacctg 60 acttcacccc tggcgagggc gtgaagtcta gagctcaact ggaaagagag ctggatccca 120 cctgggcgct tctcgtgtgc caagaacgag cgcgtcgtga tgctgacagt attgctaatg 180 agtggtacga gggcagcatg gagtgcaacc tccttatccc tcggcccaca accgaggatg 240 tatttggccc ctccatcgcc cctgagcctg tggctctagt ggaggaaact acccgttccc 300 gcgcgccgtg cgtggatgtc cctgccgagg agtcctgtaa gtcagcggag attgatcctg 360 ttgatctcgc caagttcgac tccctccatc gtcgcctgtt ggctgaagcc aacccttgca 420 gggaaatggt tctgtgggtg cctcctggcc taccagcaga gcgcgacgtc ctgcccaggg 480 cacgtggggt gataatgatc cccgaagtcc ctgcctctgc acataccttg tccgtgaagg 540 ttatggaggc tgtgcggttg gcacaggaag tcttggcatc ccttgccaag agggccttag 600 agaaaaggtc tacaccaacc cttaccgccc aggcccagcc agaggctacc ctgtcggggt 660 gcgactaccc gtatcaggag actggagcag cagccgcgtg gataacgcct ggctgcattg 720 ccatggagct cagagccaaa tttggcgtct gcaaacgcac ccccgcaaac ttagagatgg 780 ggagtcgcgt cgcccgcgag ctcctgcggg ataactgtgt cacttgcagg gagaccacgt 840 ggtacaccag tgccattgct gtggacctgt ggttgacccc gaccgtcgtc gacctggcct 900 gtggtcggcg cgcggcggat ttttggtagg ggctgtgctg cctcggctgg gggaagacac 960 tagtgtgcgg tttgacaacc tgcaccccag catcgaggta atcaaggcgg ctaggccccg 1020 cccaacccag aggatgtcgt accaaatcga cgttgtgcgt cctcttggag attttggtgt 1080 gcacaacaac tcccttgtca acctagccag gggaattaat gaaagggtgt tctacacgga 1140 caatgctagg acagaacccc ttaagcctaa ggttcccttc ccctcatcac gggagctgaa 1200 aaccttcaga gtcacccctt ggaccatgga tagggttgtg gagagctaca ctgggtccca 1260 gcgcactcgc tatgctaatg cgcgggacag catattatcc aacccactga gtcctaaaga 1320 tgcgcgggtc aagatgtttg tcaaagctga aaagataaat ttcacagcca aacctgaccc 1380 cgcccctcgt gtgatacagc ctagggatcc acgatccaac attgtcctgg ctaaatacat 1440 caagcctttg gagccaatgt tgtacaaagc actggggaaa ctttacaagt accccgcagt 1500 tgctaagggg tttaacgcgg ttgagacggg ggagatcatc gccggcaagt ggcggtgctt 1560 caaagatcct gtcgtcgtgg gattagacgc ttcccgattt gatcagcatg tatctgtcga 1620 ggcgttgcag ttcacccacg cggtgtacag agggttcatc aagtcacggg agtttaacaa 1680 cctcctacag atgatgtaca ccaaccgtgg cctagggtcc gctaaggacg gattcgtccg 1740 ttacaaggtt aaaggtagac gcatgagcgg tgacatggac acctccttgg gcaactgtgt 1800 gctcatggtg ttgctcacca ggaacctttg caaggttcta ggcatcccgc acgagctctt 1860 caacaatggt gatgattgca tcgtcttttt cgatcgttgc cacttggaga agttcaacaa 1920 tgctgtcaag acttattttg cggacctagg gtttaagatg aaggtggaac cgccggttga 1980 cgtgttggag aaaatagagt tctgccaaac gcagcctatc tatgacgggg agaagtggcg 2040 caccgtgcgt tgcatctcga gtatcggaaa agattgctca tccgttatta gttgggacca 2100 attggagggg tggtggaatg ccatcgccca gagtggtctg gctgtgtgtg gcggaatgcc 2160 gatatacacg tcgttctacc ggtggctagc acgggccggt aagagtggga ccaagtgtca 2220 gtcacacccc ttgtggaaaa acgaggggtt gaattggtac aggatgggga tggacctttc 2280 tcatgaggtt aatgttaccc ctcaggcgcg cctgtctttc ttcgcgggtt ttggtatttc 2340 ccccccgatg caggtcgcca ttgaggcgct gtatgacaag ctgcctccac cgtcccccca 2400 ccatggtcct ccggttaagg ctgtaacaca gcgagtgttc accaattatt tcacgccgga 2460 aagcgcctgt gttagcatga gcacgaatga agacaacaaa tctgactttg ctgtttacgg 2520 ccctgtgcct acagtgatgt ctctttgtgc tcagtgttag gctcttaaat tttagcgatg 2580 gcgtgacacg gttacaccct gaattgacag ggtacagatc aagggaagcc ggggagtcac 2640 caacccaccc tgaatcgaca gggcaaaaag ggaagccggg caccgcccac gtggaatcga 2700 ccacgtcacc ttttcgcgtc gactatgccg tcaacaccct ttcggcccgc cagcctagga 2760 caatggcggt agggaaatat atgacgataa tcattaatgt caataacgac gagcgcaagc 2820 aaccagaagg agctactggc agctctgtac ggcgaggtga caataaaaga actcgaggaa 2880 acaaacctcg gagtcatcac cccggttcgc gcgaacgaaa aggttacaat cacccctctc 2940 ctacccccaa aaactcaaag cagggtcagc tccgtactga agcggttcag gagcacccga 3000 aacacggggg gactgctttc cgtagagaaa gtggtggtag tgttcacccc tcacatcccc 3060 gacgacgtgc taggagaggt ggagatatgg ctccacgaca gcatcctccc ccacctcggg 3120 agcgtcggac caagactgaa actcaagctg agcgaagggc ccaagctctt agcgttctac 3180 ccaccctact cgattgcatt gggggactcg atctcgggcc agccgaggtc cttctccatt 3240 gtcaccgagc tgttcgaagg caacttcgca ccggggtgca gcccattcag cctgttcctc 3300 atgtggagtc cacgcatcga agcagtgacc cacaactact tgagtcgtcc accacgtgct 3360 ctgccaattt gcagaacgat ggtgcgggac gcgttatcgg aggtggcatc ccaacagcaa 3420 tacctgaagg gagcgatgtc gaacaggtat gccatgcctc tcactacggg tgatggccag 3480 catagagcca tgaagggggc tcccagtgcc cttccaccaa cgggggtgtg tacccaggct 3540 tctaagtgag gcttcgcttc ccgccggaag accgcggcgg ttctgttcct cccacaggag 3600 tacggcaaca acccaccttg ggaaagtggg gatcccagca ctaactcctt taactaggcg 3660 ggcgtgttgg ttacagtacg aggggacagt acgcattgaa actgagcccc accacaactc 3720 tcatccacag ggtggttggg acgcaggtgt cggagggatc gccagccctc aggatagtga 3780 gctcccgcag agggataagc tgtctccctg cgacgtagta gtagaacacg tgggataggg 3840 gatgaccttg tcgaccgttt gtcggtcccc tgctccttag agctggcaag gcgcccattg 3900 gttctacatt tctaccaaag ttggtggtgg atgtctcgcc caaaaagatc ataaacgcgc 3960 gggataaggc cctctccacc ttcgccgggt aaggctagag tcagcgctgc atgactataa 4020 cttgcggccg atccagttgc acgactggtg gtccccccca gtgtctcggt agtctgccga 4080 gtgggcggtg gtcggattcc accacaccct gccacgaggt gcgtggagac ttggccagtc 4140 taggctcgtc gtaattagta gcagcgacgt taatcaaccc gtccgggcat acaataggac 4200 cggttgtgct tcttcctctc cttcttagcc aggtggttac ctccctggcg ccc 4253 //