ID U01060; SV 1; linear; genomic RNA; STD; VRL; 4615 BP. XX AC U01060; XX DT 13-DEC-1994 (Rel. 42, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 6) XX DE Saccharomyces cerevisiae virus La, complete genome. XX KW . XX OS Saccharomyces cerevisiae virus L-BC (La) OC Viruses; Riboviria; Totiviridae; Totivirus. XX RN [1] RP 1-4615 RX DOI; 10.1093/nar/21.24.5667. RX PUBMED; 8284213. RA Bruenn J.A.; RT "A closely related group of RNA-dependent RNA polymerases from RT double-stranded RNA viruses"; RL Nucleic Acids Res. 21(24):5667-5669(1993). XX RN [2] RP 1-4615 RX DOI; 10.1006/viro.1996.0083. RX PUBMED; 8607277. RA Park C.M., Lopinski J.D., Masuda J., Tzeng T.H., Bruenn J.A.; RT "A second double-stranded RNA virus from yeast"; RL Virology 216(2):451-454(1996). XX RN [3] RP 1-4615 RA Bruenn J.A.; RT ; RL Submitted (25-AUG-1993) to the INSDC. RL Jeremy A. Bruenn, Biological Sciences, State University of New York at RL Buffalo, SUNY/Buffalo, Buffalo, NY 14260, USA XX DR MD5; ed62808276f3a76c0e0a8983d881b80b. DR EuropePMC; PMC2526308; 17570970. DR EuropePMC; PMC3393542; 22496220. DR EuropePMC; PMC3659425; 20976609. DR EuropePMC; PMC4019141; 24574403. DR EuropePMC; PMC5288835; 27940540. XX FH Key Location/Qualifiers FH FT source 1..4615 FT /organism="Saccharomyces cerevisiae virus L-BC (La)" FT /host="Saccharomyces cerevisiae" FT /lab_host="Saccharomyces cerevisiae" FT /mol_type="genomic RNA" FT /note="Saccharomyces cerevisiae virus ScV-La" FT /db_xref="taxon:42478" FT CDS 24..2117 FT /codon_start=1 FT /gene="cap" FT /product="capsid" FT /db_xref="GOA:Q87026" FT /db_xref="InterPro:IPR015302" FT /db_xref="InterPro:IPR036332" FT /db_xref="UniProtKB/Swiss-Prot:Q87026" FT /protein_id="AAB02145.1" FT /translation="MSSLLNSLLPEYFKPKTNLNINSSRVQYGFNARIDMQYEDDSGTR FT KGSRPNAFMSNTVAFIGNYEGIIVDDIPILDGLRADIFDTHGDLDMGLVEDALSKSTMI FT RRNVPTYTAYASELLYKRNLTSLFYNMLRLYYIKKWGSIKYEKDAIFYDNGHACLLNRQ FT LFPKSRDASLESSLSLPEAEIAMLDPGLEFPEEDVPAILWHGRVSSRATCILGQACSEF FT APLAPFSIAHYSPQLTRKLFVNAPAGIEPSSGRYTHEDVKDAITILVSANQAYTDFEAA FT YLMLAQTLVSPVPRTAEASAWFINAGMVNMPTLSCANGYYPALTNVNPYHRLDTWKDTL FT NHWVAYPDMLFYHSVAMIESCYVELGNVARVSDSDAINKYTFTELSVQGRPVMNRGIIV FT DLTLVAMRTGREISLPYPVSCGLTRTDALLQGTEIHVPVVVKDIDMPQYYNAIDKDVIE FT GQETVIKVKQLPPAMYPIYTYGINTTEFYSDHFEDQVQVEMAPIDNGKAVFNDARKFSK FT FMSIMRMMGNDVTATDLVTGRKVSNWADNSSGRFLYTDVKYEGQTAFLVDMDTVKARDH FT CWVSIVDPNGTMNLSYKMTNFRAAMFSRNKPLYMTGGSVRTIATGNYRDAAERLRAMDE FT TLRLKPFKITEKLDFRVAAYAIPSLSGSNMPSLHHQEQLQISEVDAEPINPIGEDELPP FT DIE" FT misc_feature 1970 FT /gene="cap" FT /function="translational frameshift site" FT CDS <1970..4561 FT /codon_start=1 FT /gene="pol" FT /product="RNA polymerase" FT /db_xref="GOA:P23172" FT /db_xref="InterPro:IPR001795" FT /db_xref="InterPro:IPR015302" FT /db_xref="InterPro:IPR036332" FT /db_xref="UniProtKB/Swiss-Prot:P23172" FT /protein_id="AAB02146.1" FT /translation="FSCSSLRDTKFVGQQYAILTPSGTTTDIRSGRGTNQSYRRGRTST FT GYRIGVEDDEDLDIGTVKYIVPLYLNGDNVAQNCLEATHVLIKACSIANRIVDDGEGHC FT FTQQGLAQQWIFHRGEMIFVKAVRIGQLNAYYVDYKNVTNYSLKTAAQVGATISNNLRH FT GFVDNQQDAYTRLVANYSDTRKWIRDNFTYNYNMEKEKYRITQYHHTHVRLKDLFPSRK FT IVKLEGYEALLAMMLDRFNNIESTHVTFFTYLRALPDREKEVFISLVLNYNGLGREWLK FT SEGVRAKQAQGTVKYDMSKLFELNVLENGVDEEVDWEKEKRNRSDIKTVNISYAKVLEH FT CRELFIMARAEGKRPMRMKWQEYWRQRAVIMPGGSVHSQHPVEQDVIRVLPREIRSKKG FT VASVMPYKEQKYFTSRRPEIHAYTSTKYEWGKVRALYGCDFSSHTMADFGLLQCEDTFP FT GFVPTGSYANEDYVRTRIAGTHSLIPFCYDFDDFNSQHSKEAMQAVIDAWISVYHDKLT FT DDQIEAAKWTRNSVDRMVAHQPNTGETYDVKGTLFSGWRLTTFFNTALNYCYLANAGIN FT SLVPTSLHNGDDVFAGIRTIADGISLIKNAAATGVRANTTKMNIGTIAEFLRVDMRAKN FT STGSQYLTRGIATFTHSRVESDAPLTLRNLVSAYKTRYDEILARGASIDNMKPLYRKQL FT FFARKLFNVEKDIVDNLITMDISCGGLQEKGRVSEMVLQEVDIENIDSYRKTRMIAKLI FT DKGVGDYTAFLKTNFSEIADAITRETRVESVTKAYNVKKKTVVRAFRDLSAAYHERAVR FT HAWKGMSGLHIVNRIRMGVSNLVMVVSKINPAKANVLAKSGDPTKWLAVLT" XX SQ Sequence 4615 BP; 1431 A; 860 C; 1101 G; 1223 T; 0 other; gaatttttcg gtgaaccgga attatgtcgt ctctgttaaa ttcattacta ccagaatatt 60 ttaaacctaa aactaatttg aatatcaact cttctagggt ccaatatggc tttaatgctc 120 gcattgatat gcagtatgaa gacgatagtg ggactagaaa aggctcaaga cccaatgcat 180 ttatgtctaa cacagttgct tttataggaa actatgaagg tattattgtt gatgacattc 240 cgatattgga tggtcttagg gccgacattt ttgatactca tggtgactta gacatgggcc 300 tcgttgagga tgcattgtct aagagtacca tgattagaag gaatgtacca acttatactg 360 cttacgcgag tgaattactg tataagagaa accttacatc tctattttac aatatgctcc 420 gtttatacta cattaaaaaa tggggcagta ttaagtatga aaaagatgcc atcttttatg 480 ataatggcca cgcctgtctt ttaaacaggc aattgtttcc aaagtctcgt gatgcttctt 540 tggaatcaag cctctctttg cctgaggctg aaattgcaat gcttgatcct ggcctggaat 600 ttccagaaga ggatgtgcct gcaattttat ggcacggcag agtgtcatcc agagcaacgt 660 gtatcttagg gcaagcttgc tcagagttcg cgcctctggc ccccttttcg attgcgcatt 720 attcaccaca attgacgaga aaactatttg tcaatgcgcc cgctgggatt gagcctagct 780 ccgggcggta tactcacgag gatgtaaaag atgcgattac gatccttgtg tctgcaaacc 840 aggcttatac tgactttgaa gcagcatact tgatgcttgc tcaaacgttg gtctcacctg 900 taccacgcac tgccgaagca agtgcatggt tcatcaatgc tggcatggtc aatatgccaa 960 ctttgtcatg tgcaaatggt tattatccag cactgaccaa tgtcaatcct taccaccggc 1020 tagacacatg gaaagatacg ttaaatcatt gggtggctta tcccgacatg ctgttttacc 1080 attcagtggc aatgattgag agctgctatg ttgaactcgg gaatgtggct cgtgtgtcag 1140 acagtgatgc aataaacaaa tacactttca ctgagctatc agtgcaagga cggcctgtta 1200 tgaatcgagg aattattgta gatctgacac ttgtggcaat gcgtactggt agggagatct 1260 cactacctta cccggtcagc tgtggcctga cccgtacaga cgcgttattg caaggtactg 1320 agattcacgt tccagttgtt gtcaaagata tcgacatgcc ccagtattac aacgcgattg 1380 ataaggatgt tattgagggg caggaaactg tgattaaagt gaaacagctg ccaccagcta 1440 tgtatccaat ttatacttac gggatcaaca ctactgaatt ctattctgac cattttgaag 1500 accaggtaca agttgaaatg gcaccaatcg ataatggaaa agcagttttt aacgatgcaa 1560 gaaagttttc gaaatttatg tccataatgc gcatgatggg gaatgatgtt actgctactg 1620 atttagttac aggtagaaaa gtgtcgaatt gggccgacaa ctcatcaggg cgtttcttgt 1680 acacggatgt gaagtatgaa ggacaaactg cctttttggt tgatatggat actgtcaagg 1740 cgagagacca ctgttgggtg tcaattgttg atcctaatgg tacaatgaac ttgtcatata 1800 agatgaccaa ttttagagca gcaatgtttt ctagaaacaa gcccttgtat atgacagggg 1860 ggtcagtcag gaccatagct actggcaatt atcgagatgc tgctgaaaga ttacgtgcaa 1920 tggatgaaac gctcagatta aaacctttta agattactga gaagttggat tttcgtgtag 1980 cagcttacgc gataccaagt ttgtcgggca gcaatatgcc atccttacac catcaggaac 2040 aactacagat atcagaagtg gacgcggaac caatcaatcc tataggagag gacgaacttc 2100 caccggatat agaataggtg tcgaagacga tgaggactta gatattggta cggtcaaata 2160 cattgtgcca ttgtatttga acggtgataa tgtggcacaa aattgtttag aagcaacaca 2220 cgtgcttatc aaagcttgta gtattgcgaa ccggattgta gatgacggag agggtcactg 2280 tttcacacag caagggctgg cgcagcagtg gatcttccat aggggggaga tgatatttgt 2340 gaaggcggta cgcattggtc aactcaatgc atattatgta gactataaga acgtcacaaa 2400 ttatagtctt aaaaccgctg ctcaagtagg agcgacgata tcaaataact tacgccacgg 2460 atttgttgac aatcaacaag acgcatacac gcgcttggtt gccaactact ctgatacgcg 2520 gaagtggata cgtgacaatt ttacatataa ttataatatg gagaaagaaa agtataggat 2580 aacccaatac caccatacac atgtgaggtt gaaagatttg tttccatcca ggaaaatagt 2640 taaactagag ggatatgaag ccttgttggc aatgatgcta gacaggttta acaacataga 2700 gtcaacacat gtaactttct tcacatattt aagagcacta cctgaccgtg aaaaagaagt 2760 ctttattagc ttagtcttaa actataatgg ccttggcaga gagtggttga agtctgaagg 2820 tgttagggct aaacaagcac aaggtactgt gaaatacgat atgagtaaac tatttgaact 2880 gaatgtacta gagaacggag ttgacgaaga agttgactgg gagaaagaga aacgcaacag 2940 gtcagatatc aagactgtta acataagtta tgcaaaagtt ctcgaacatt gtagagagct 3000 attcatcatg gcgagggccg aagggaaacg gccaatgagg atgaaatggc aagagtactg 3060 gaggcagaga gcagttatca tgccaggtgg atcggtccac agtcaacatc cagtcgaaca 3120 ggacgtgatt agagtattac ccagagaaat cagaagtaag aagggggtgg caagtgtcat 3180 gccatacaaa gaacagaagt atttcacgtc cagaaggccg gaaatacacg cttacacttc 3240 aacgaaatac gagtggggaa aagtgagggc actatatggg tgtgattttt catcacatac 3300 aatggctgat tttggattgt tacaatgcga ggatacattc ccgggctttg taccaacagg 3360 gtcttacgcc aatgaggatt atgtcaggac cagaattgct gggactcact cattgatccc 3420 tttctgttac gatttcgatg atttcaacag ccaacattca aaggaagcca tgcaagcagt 3480 gattgatgca tggatatctg tctatcacga taagttaaca gatgaccaga tagaggcggc 3540 aaagtggaca cgaaactcgg tagatagaat ggtcgctcac caacctaaca ctggtgagac 3600 ttatgatgtt aaagggacac tgtttagtgg ctggcgatta acaacatttt tcaatacggc 3660 gttgaactat tgctacctgg ctaatgcagg tataaactca ctagtgccaa cgagtctcca 3720 taatggtgat gatgtttttg cagggataag gacaatagct gacggtattt ctttgatcaa 3780 aaacgccgca gccacgggag ttcgcgctaa tacaactaaa atgaacattg gtacgatagc 3840 agagtttttg agagttgata tgcgtgcaaa aaatagtact ggcagtcagt atttaacaag 3900 agggattgct accttcacgc acagtagggt tgagtctgat gcaccactga cattgcgcaa 3960 tctagtatct gcttacaaaa ccagatatga cgagatttta gctcgtggcg caagcatcga 4020 taacatgaag ccactctatc gtaagcaatt attttttgct agaaagttgt tcaatgtcga 4080 gaaggacatt gttgacaatc tgataacgat ggacatatca tgtggcggtt tgcaagaaaa 4140 gggtagggta tcagagatgg tgttacagga ggttgacatt gagaatatag atagttatag 4200 gaagacaagg atgatcgcca aactgattga caagggggtt ggcgattata ctgcattcct 4260 gaaaactaac ttttccgaga tagctgatgc tatcacaaga gagacacgtg tagagtcagt 4320 gaccaaggct tataatgtta agaagaaaac ggtcgtacgc gcgtttaggg acctaagcgc 4380 agcatatcat gaaagagcgg tgagacatgc ttggaagggg atgagtggac tacacatagt 4440 caacaggatt cgtatgggag tgagcaactt agtaatggtt gttagcaaaa tcaatcctgc 4500 aaaagctaat gtgctagcca aatcaggaga tcctacaaaa tggcttgcag tccttacatg 4560 atatacaggc aaccacataa gacctgagaa caaagagtac atacgatact acgca 4615 //