ID   S63537; SV 1; linear; genomic RNA; STD; VRL; 1920 BP.
XX
AC   S63537;
XX
DT   13-JAN-1994 (Rel. 38, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 3)
XX
DE   polyprotein {RNA-2} [cherry leaf roll nepovirus CLRV, birch isolate I2,
DE   Genomic RNA, 1920 nt].
XX
KW   .
XX
OS   Cherry leaf roll virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RC   GenBank staff at the National Library of Medicine created this entry [NCBI
RC   gibbsq 134799] from the original journal article. This sequence comes from
RC   Fig. 1.
RP   1-1920
RX   DOI; 10.1007/BF01379093.
RX   PUBMED; 8328915.
RA   Scott N.W., Cooper J.I., Edwards M.L.;
RT   "The identification, cloning, and sequence analysis of the coat protein
RT   coding region of a birch isolate (I2) of cherry leaf roll nepovirus";
RL   Arch. Virol. 131(1-2):209-215(1993).
XX
DR   MD5; 7bf09bd09c5f94414e3c50c57c3b6392.
DR   EuropePMC; PMC3314827; 22218961.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1920
FT                   /organism="Cherry leaf roll virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12615"
FT   CDS             1..1639
FT                   /partial
FT                   /codon_start=2
FT                   /gene="polyprotein"
FT                   /product="polyprotein"
FT                   /note="Method: conceptual translation with partial peptide
FT                   sequencing. This sequence comes from Fig. 1."
FT                   /db_xref="GOA:Q86631"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q86631"
FT                   /protein_id="AAB27443.1"
FT                   /translation="PPCKQEEHTGNYNALLAVALVVEGSSRLSGARSMSNLRIDRGNHD
FT                   GVPNCPLRQREGHDGDGARGQQQPPINLPLQSRITPGMHWSAVTPFKCAAEAAENTILA
FT                   RWSLRSIISESGTDAWTKWQRELPTTFLVTGTIAMSVNIMAGTTLGLVCDVFNRSKLLD
FT                   TFPSTLGQNMPQRVFPLSNPLERNFSFSMGELLGHTMHPQATAFEDVQFILYVLNTNDV
FT                   ACAAEWGGHILWQMKDDANAPYELQLPVVPKDGARLDVWRGPATFAQGSFPSTINVNLG
FT                   FAEPRTVLTGYAPITSFHQAALSYFISYGGTIHGRLVKIGSGLVQVDIALAMWHDNADG
FT                   VEFRELIKIPHVLLSGGDGEFSLPLNAPFGHTSTRDRGPTMAVCLVSGVVAPKDCSAPY
FT                   RFMVYFDRVEFDTQLPPVIATRLQFLWASFSGFAPVVPEAPRTWMIPCRLSDYKVEGAT
FT                   LKMEAHPLARLVASRGMFQGTMRFILRWTFASSLTTPTTYVQLVHKFGTTTSSESYLTK
FT                   LRHASQSTVLNLDVVVAGLGGFMRLRSG"
XX
SQ   Sequence 1920 BP; 441 A; 438 C; 476 G; 565 T; 0 other;
     gccgccttgc aaacaggagg aacacactgg aaactacaac gctctgctag cagtcgcttt        60
     ggtagtggaa ggttcttcgc gcttatcagg tgcccgatcc atgtctaatt taaggattga       120
     tcgtggcaac catgatggtg tgcctaattg ccctttgcgt caacgtgagg ggcatgatgg       180
     tgacggagct cgggggcaac agcaaccccc aataaatctg cccttgcaat ccaggataac       240
     tcctggtatg cattggtcgg cagtcacgcc ttttaagtgc gctgctgaag ctgcagaaaa       300
     tacaatcctc gctcgttggt ccctgcgctc tattattagt gagagtggga ctgatgcttg       360
     gactaagtgg cagcgtgaat taccgaccac ttttctagtt actggtacca ttgccatgtc       420
     tgtaaatatt atggctggta ccaccctagg tttagtttgc gatgttttta atcgctctaa       480
     attattagat acttttccta gtactctggg gcagaacatg cctcagagag ttttcccttt       540
     gagcaaccca ctagagagaa attttagctt ctctatgggc gaattactag gtcatactat       600
     gcatcctcag gcaacagcct ttgaggatgt acaattcatt ctttatgttc tcaacacgaa       660
     tgatgttgct tgtgcagcgg agtggggagg acacattctt tggcaaatga aggacgatgc       720
     caatgctcct tacgaactac aattacctgt ggttccaaag gatggtgctc gtctggatgt       780
     ctggcggggt cctgcaactt ttgcgcaggg ctcatttcca agcacgatca atgtgaattt       840
     aggtttcgcc gaacctagaa ccgtgcttac agggtatgct cctattactt ctttccacca       900
     agcagccctg tcatatttta tttcttatgg tggaactata catggccgtc ttgtaaagat       960
     tggctctggt ttggtgcaag ttgatattgc actggccatg tggcatgata atgccgatgg      1020
     ggtggagttc agagagctca taaaaatacc ccatgtgtta ctcagtggtg gtgacgggga      1080
     attttcttta cccctgaatg ctccatttgg gcacacctca actagagacc gcggcccaac      1140
     tatggctgtt tgtctcgtat ctggcgtagt ggcgccaaaa gattgctctg ccccgtatcg      1200
     atttatggta tattttgata gggtggagtt tgacacgcag ttacctccag tgattgcaac      1260
     taggcttcaa ttcctctggg cttccttctc aggttttgcc ccagtggttc cagaagcacc      1320
     acgcacctgg atgatacctt gtcgtctttc agactataag gttgagggtg caactctcaa      1380
     aatggaggca catccacttg cccgcttagt ggcttctcgg ggtatgtttc aagggacaat      1440
     gaggttcatc ttacgatgga cttttgcgtc ttcgctaaca actcccacca cttatgtaca      1500
     gttggtgcat aagtttggaa ccaccacgtc gagtgaatcc tacttgacaa aattgcgtca      1560
     tgcttcccaa agtactgtgc ttaatcttga tgtggtggta gctgggctgg gcggttttat      1620
     gcggctcagg agtggctgag agtagggaga attttattga aatctctctc agcaaacctg      1680
     gtgatttggc caagcttgat ataattatcg agttattgcc tggtttcagg tttaggggtc      1740
     ccacaataac ccctttggtc cgcctcactt aggacccact tgtggttggt agtttcctaa      1800
     actacccagt tcctagctgt ctctaggacg tttggttgcc gtaagcagcc ttcaaaagga      1860
     tgtcatcgct tagcgtttta ccggaaaggt taaagatgtg aatgacagcg taacgcactg      1920
//