ID S60150; SV 1; linear; genomic RNA; STD; VRL; 3426 BP. XX AC S60150; XX DT 13-JAN-1994 (Rel. 38, Created) DT 01-SEP-2004 (Rel. 81, Last updated, Version 3) XX DE ORF1...ORF6 {3' terminal reigon} [chrysanthemum virus B CVB, Genomic RNA, 6 DE genes, 3426 nt]. XX KW . XX OS Chrysanthemum virus B OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus. XX RN [1] RC GenBank staff at the National Library of Medicine created this entry [NCBI RC gibbsq 60150] from the original journal article. RP 1-3426 RX PUBMED; 1919520. RA Levay K., Zavriev S.; RT "Nucleotide sequence and gene organization of the 3'-terminal region of RT chrysanthemum virus B genomic RNA"; RL J. Gen. Virol. 72(Pt 10):2333-2337(1991). XX DR MD5; 43e5c3299a7b0e4fcd445401472eaf26. DR EuropePMC; PMC3999073; 23759549. XX FH Key Location/Qualifiers FH FT source 1..3426 FT /organism="Chrysanthemum virus B" FT /mol_type="genomic RNA" FT /db_xref="taxon:12165" FT gene <1..787 FT /gene="ORF1" FT CDS <1..787 FT /codon_start=2 FT /gene="ORF6" FT /note="RNA replicase homolog; conceptual translation FT presented here differs from translation in publication" FT /db_xref="GOA:P37987" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/Swiss-Prot:P37987" FT /protein_id="AAB20076.2" FT /translation="PPYMRYIEAKLHEVLPSRFYIHSGKGLEELNEWVIKGKFEGICTE FT SDYEAFDASQDQYIVAFELALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEAS FT TFLFNTMANMLFTFLRYNIKDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFF FT VDKPTFCGWHLCPDGIYKKPQLVLERMCIAKEKNNLANCLDNYAIEVSYAYKLGERAVN FT RMDEEELEAAYNCVRIIIKNKKLLKSDILGFYSNIEKQI" FT gene 785..1513 FT /gene="ORF2" FT CDS 821..1516 FT /codon_start=1 FT /gene="ORF6" FT /note="ORF2" FT /db_xref="GOA:P37988" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/Swiss-Prot:P37988" FT /protein_id="AAB20077.1" FT /translation="MDVFVKILSDFGFTRLSSSLHVPIVVHCMPGAGKSSCIRALLKAD FT SRFVAYTLGVPDPCNLDGLCIKAFTGSVDLKYFNILDEYARYNGDASDFFALFGDPVQS FT PPRNLYRAHFKAVLSKRFGSCTAQLLRELGFEVESTKEDLVSIRGLYDFDPVGTVIYYE FT KEIGCLLRAHSIEAYEPEEVVGKTFETVTFVTAENHIPAESRHLVYQCLTRHRSVLHLM FT TPDASYTST" FT gene 1494..1814 FT /gene="ORF3" FT CDS 1494..1814 FT /codon_start=1 FT /gene="ORF6" FT /note="ORF3; conceptual translation presented here differs FT from translation in publication" FT /db_xref="GOA:P37989" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/Swiss-Prot:P37989" FT /protein_id="AAB20078.2" FT /translation="MPLTPPPDHTKVLLVAAIGLSIVASILTYSRNTLPQVGDHSHLLP FT HGGVYKDGTKTIVYGGPRKLNSLEGGFNLPVQPWFLVILLSAAIFLLSCRSGHRRVCGQ FT CH" FT gene 1805..2025 FT /gene="ORF4" FT CDS 1805..1999 FT /codon_start=1 FT /gene="ORF6" FT /note="ORF4" FT /db_xref="GOA:P37990" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/Swiss-Prot:P37990" FT /protein_id="AAB20079.1" FT /translation="MSLSYLDLLLAFGCVLAVSVIVNCFLVSHNNCVIEITGEAVRISG FT CTFDRTFVELVKGLKPARH" FT gene 2026..3007 FT /gene="ORF5" FT CDS 2054..3001 FT /codon_start=1 FT /gene="ORF6" FT /product="coat protein" FT /db_xref="GOA:P37991" FT /db_xref="InterPro:IPR000052" FT /db_xref="InterPro:IPR013569" FT /db_xref="UniProtKB/Swiss-Prot:P37991" FT /protein_id="AAB20080.1" FT /translation="MPPKPAPGDNEGNASGSTPTPPPPPPARTAEEARLRLAEMERERE FT QEQLLEEMNSNTPAEDARNISRLTQLAALLRREQTNVHVTNMALEIGRPALQPPPNMRG FT DPTNMYSQVSSDFLWKIKPQRISNNMATSEDMVKIQVALEGLGVPTESVKEVIIRLVLN FT CANTSSSVYQDPKGVIEWDGGAIIADDVVGVITKHSTLRKVCRLYAAVAWNYMHLQQTP FT PSDWSAMGFHPNVKYAAFDFFDYVENGAAIRPSGGIVPKPTRAEYVAYNTYKMLALNKA FT NNNDTFGNFDSAITGGRQGPAIHNNLNNANNKTL" FT gene 3017..3426 FT /gene="ORF6" FT CDS 3017..3340 FT /codon_start=1 FT /gene="ORF6" FT /product="basic protein with putative zinc finger motif" FT /db_xref="GOA:P37992" FT /db_xref="InterPro:IPR002568" FT /db_xref="UniProtKB/Swiss-Prot:P37992" FT /protein_id="AAB20081.1" FT /translation="MDVIVKMLILRKFVEQGNVCPIHLCVDIYKRAFPRSVNKGRSSYA FT RRRRALELGRCHRCYRVYPPLFPEISRCDNRTCVPGISYNSKVRDYILWGVTEVIPHPG FT YNF" XX SQ Sequence 3426 BP; 928 A; 670 C; 827 G; 1001 T; 0 other; cccgccctac atgcgctata ttgaggcgaa acttcatgag gttctgccca gcagattcta 60 catacactca gggaagggat tagaagagct taatgagtgg gttatcaaag gtaagttcga 120 gggcatttgc acagaatcag attatgaagc cttcgatgct tcacaggatc agtacatagt 180 tgcttttgaa ttagctctaa tggagtattt ggggttgcca agggatttaa ttgaggatta 240 cgctttcatc aagtgccatt tgggttccaa gttaggcaac tttgccatca tgcgattctc 300 tggggaggct agtactttcc tgtttaacac aatggctaac atgttattca ccttcttgcg 360 ctacaacatt aaagatagtg agcacatttg cttcgcagga gatgacatgt gtgcctcaga 420 gcgcctatgc atcaagaaag agcatgaagg ttttttaaat aaattaaaat tgaaggcaaa 480 agtgttcttt gtggataaac cgactttttg tggatggcac ctatgtcctg atggcatata 540 taaaaagcct caattagtgc tagaacgtat gtgtattgcc aaggagaaga ataatttggc 600 caattgttta gataattatg caattgaggt ctcatacgca tacaaacttg gtgaacgggc 660 tgtcaatagg atggatgaag aagagttgga agcagcttac aactgtgtcc ggataattat 720 taaaaataag aaactcttaa agtccgacat acttgggttc tattccaaca ttgaaaaaca 780 aatttaaaat acgcttaggt tgtagctata ggattgttat atggatgtgt ttgtaaagat 840 tttgagtgat tttggtttta cacgtttaag tagtagctta catgtgccta ttgttgtcca 900 ctgtatgcca ggagctggga agagtagttg tattcgagca ttattaaaag ctgattcaag 960 gttcgtggcg tacactttag gtgttcctga tccttgcaat ttggacggtt tgtgcatcaa 1020 agcatttacc gggtctgttg atcttaagta tttcaatatc cttgacgaat acgctcgcta 1080 caacggtgac gctagcgatt tctttgcact ctttggtgat ccagttcaga gccctccgcg 1140 caatttatac agggcccatt tcaaggcagt gcttagcaag cggtttggta gttgcactgc 1200 gcaattactc cgagagcttg gatttgaggt tgagagcaca aaagaggact tagttagcat 1260 ccgagggttg tacgactttg atcccgtagg tacggttatc tactacgaaa aggaaatagg 1320 ttgtttattg agagcccatt ccattgaagc ctacgaacct gaagaggtcg tcgggaagac 1380 gtttgaaacg gtcaccttcg taactgctga aaaccatata cctgcagaat ctagacactt 1440 ggtttaccag tgtctcacac gacaccgctc agtgttacat cttatgactc ctgatgcctc 1500 ttacacctcc acctgatcac acgaaagttc tccttgttgc ggccattggc ttgagtattg 1560 tcgcatctat attgacttac agcaggaata cacttcctca agtcggtgac cattcacatc 1620 tgttgccgca cggtggtgtg tacaaagacg ggacaaagac tatcgtttac ggaggcccta 1680 ggaaactgaa ttctctagag ggtggattta acttaccagt gcagccttgg ttccttgtta 1740 tactattaag tgcagccatt ttcttgctta gttgtcgtag tgggcaccgt agggtctgtg 1800 gtcaatgtca ttaagttact tagatttact tttagctttt gggtgtgttc tggctgttag 1860 cgttattgta aattgctttt tggttagtca taataattgc gtgattgaaa taactggtga 1920 agctgtgagg atttctggtt gcaccttcga taggactttc gtcgaactgg ttaaagggct 1980 caagccggct aggcattagt gatactctta ggtttgtgag tggttagatc gttatatttg 2040 aattttagtc actatgcctc ccaaaccggc accaggtgat aatgaaggta acgcaagtgg 2100 gtccacacca actccacctc cacccccacc agcacgaacc gcggaagagg cgaggttgag 2160 gcttgcagag atggaacgag agcgtgagca ggagcaattg ctagaggaga tgaactccaa 2220 caccccagct gaggatgcca ggaacataag ccgtctgaca caactcgctg cgctactgag 2280 gagagagcag acgaatgtgc acgttacgaa catggctttg gagataggta ggcctgcact 2340 ccagcctcca cctaatatgc gaggggatcc aactaatatg tacagccagg tgtcttccga 2400 tttcctgtgg aagattaaac cacagaggat ttctaataac atggcaacat ctgaggatat 2460 ggtgaagata caagtggccc ttgaaggctt gggggtacct accgaatcag tcaaagaggt 2520 gatcatccgt ctagtgctca attgtgcgaa taccagcagt tccgtttacc aggatccaaa 2580 gggggtaatc gagtgggatg gtggagcgat tattgccgac gatgtcgtag gggttattac 2640 taaacacagc acccttagga aagtgtgccg tctctatgca gctgtggcat ggaactacat 2700 gcatttacaa cagaccccac cttctgattg gtcggctatg ggctttcatc caaatgttaa 2760 gtatgctgcc tttgatttct tcgactatgt cgaaaatgga gctgcaatca gaccaagtgg 2820 tggcattgtg cctaaaccca cacgtgcgga gtatgtggcg tacaatactt acaagatgtt 2880 agctctcaat aaggccaaca acaatgatac ctttggcaat ttcgattctg ccattacggg 2940 tgggagacaa ggaccggcta ttcacaacaa tctgaacaat gcgaataata agacattata 3000 aagtagtagt tgatatatgg atgtgattgt gaagatgcta atcctacgta agtttgttga 3060 acagggtaat gtatgcccta ttcatttgtg tgttgatatt tacaagcgtg ctttccctag 3120 gagtgtgaat aaaggtagat cttcatacgc tagacgtcgc cgagctctag agcttggtcg 3180 gtgtcatagg tgttacaggg tctaccctcc tttgtttccc gagatttcta ggtgcgataa 3240 tcgcacttgt gtgcctggta tttcttataa tagtaaagtg agagattata tcctttgggg 3300 agtaaccgag gtgatacccc accctgggta taatttctaa agtagtagct gcttctaaag 3360 cctaaataat atatatggtt gtagctttaa aaaatcagtg agttttaata tatttttcct 3420 tactta 3426 //