ID M96148; SV 1; linear; genomic RNA; STD; VRL; 2536 BP. XX AC M96148; XX DT 03-NOV-1992 (Rel. 33, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 3) XX DE Squash Moasic Virus 42 kDa capsid protein and 22 kDa capsid protein. XX KW capsid protein; coat protein. XX OS Squash mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus. XX RN [1] RP 1-2536 RX DOI; 10.1007/BF01318993. RX PUBMED; 8503782. RA Hu J.H., Pang S.Z., Nagpala P.G., Siemieniak D.R., Slightom J.L., RA Gonsalves D.; RT "The coat protein genes of squash mosaic virus: cloning, sequence analysis, RT and expression in tobacco protoplasts"; RL Arch. Virol. 130(1-2):17-31(1993). XX DR MD5; a29fb0d8ada8189038a8e35fdc0c28bc. DR GOA; P36341. DR InterPro; IPR003181; Como_LCP. DR InterPro; IPR003182; RNA2_polyprotein. DR InterPro; IPR029053; Viral_coat. DR UniProtKB/Swiss-Prot; P36341; POL2_SQMVM. XX FH Key Location/Qualifiers FH FT source 1..2536 FT /organism="Squash mosaic virus" FT /strain="melon" FT /mol_type="genomic RNA" FT /db_xref="taxon:12263" FT mRNA 1..2509 FT /function="encodes the two distinct viral capsid proteins, FT 42 kDa and 22 kDa" FT /experiment="experimental evidence, no additional details FT recorded" FT exon 1..2373 FT /experiment="experimental evidence, no additional details FT recorded" FT mat_peptide 694..1816 FT /product="capsid protein" FT /note="42 kDa; putative" FT mat_peptide 1819..2368 FT /product="capsid protein" FT /experiment="experimental evidence, no additional details FT recorded" FT 3'UTR 2369..2496 FT polyA_site 2536 XX SQ Sequence 2536 BP; 668 A; 521 C; 573 G; 774 T; 0 other; caaccagaaa gctattataa tcactccttt ctatgtttcc atggattgct tcacctctcc 60 tgatagtaat atttgtggtg gcatgctgtt ggttgataca gcacatttaa atccggataa 120 tgctataaga agcgtgttcg ttgcgccatt tataggtggt cgtcctattc gagttttgct 180 atttccagac accttggtgg agattgcccc gaacatgaac tcccgattca aattgctatg 240 tactacgagt aatggcgatg ttgcaccaga tttcaatttg gcgatggtca aagtcaacgt 300 tgcaggttgt gctgttagtt tgactaagac atacactcct acagcttatc tcgagcaaga 360 gttaatcaaa gaaaaggggg ccattgttca atatttgaac aggcacacct tctctatgca 420 tcggaacaat cagatgacaa aggaagagat gcaaaagcag cgcctatctt ttaggttgga 480 aagtgctctc actttgcagg aaaagcatcc tttgcacgcc actttctgca aatcaactaa 540 ctttgtgtac aagattggtg gagatgcaaa agagggcagc aatggcaatc taactgtcaa 600 tgaaagccaa ttgtcctcac actctccttc tgcacatgtt ttgcacaagc acaacaacag 660 tggtgacaat gaagtagagt tctcagaaat tggtgtagtt gtaccaggtg ctggcagaac 720 caaggcttat ggccaaaatg agctagatct tgcgcaactt tctctggatg acaccagttc 780 tcttcgtgga actgcgttgc agaccaaact ggccacgtcc cgtatcattt tgagtaagac 840 aatggtcgga aatactgtgc tcagggagga tttgcttgcc acctttttgc aagatagcaa 900 tgagagggcc gctatagatt tgattcgcac ccatgtcatt agaggcaaaa tacgctgtgt 960 tgcttctatc aatgttccag aaaatacagg ttgtgcatta gctatctgtt tcaacagtgg 1020 cataacagga gctgcagata cagatattta taccacaagt tctcagaatg ccattgtgtg 1080 gaatcctgct tgcgagaaag ctgttgagct gacattcaac cccaatcctt gtggtgatgc 1140 ttggaatttt gtgtttctgc aacaaacaaa ggcacatttt gccgttcagt gtgtgaccgg 1200 gtggactaca acgccactta cagatttagc gttggtgctt acatggcaca ttgatagaag 1260 cttgtgtgtg cccaaaactt tgacaattag ctctgcacat gcttcttttc caataaatcg 1320 ttggatggga aagttgtcct ttccgcaagg gcctgcgcgt gttcttaaga ggatgccctt 1380 ggccattggt ggcggggctg gtaccaaaga tgctatcttg atgaatatgc caaacgctgt 1440 tatttcactt catcgatatt ttagagggga ttttgtcttt gaaataacaa agatgagttc 1500 tccttatatc aaggcaacca ttgctttctt tatagcgttt ggtgatatta cggaggaaat 1560 gactaacttg gagagttttc cccacaagct tgtgcagttt gctgaaattc aggggcgcac 1620 taccataacg ttcacgcaaa gcgaattttt gacggcatgg tctacacaag tattaagcac 1680 tgttaatcct cagaaagatg ggtgtcccca cttgtatgca ctcttgcacg attctgctac 1740 gtcaaccatt gaaggaaatt ttgtcattgg tgttaaattg ctggatatta ggaactatcg 1800 tgcttacggc cataaccctg gttttgaggg agctcgctta ctaggaattt ctgggcagag 1860 taccatggta cagcagcttg gaacttataa tccaatctgg atggttcgca cgcccttaga 1920 aagtacagcc caacagaatt ttgcgagttt cactgctgat ttgatggaat ccacgataag 1980 tggggactct accggaaatt ggaatatcac agtttacccg agtcctatag ctaatttatt 2040 gaaagtggct gcttggaaga aggggactat aagatttcaa cttatttgtc ggggtgctgc 2100 tgttaagcag tctgactggg ctgcgtcagc tagaatagac ttgattaaca acctctcgaa 2160 caaagcttta cccgcacgtt cctggtatat tactaagcca cgaggaggcg acatcgagtt 2220 tgacttagag atagcgggac caaacaatgg tttcgaaatg gcgaactcca gttgggcttt 2280 ccagaccaca tggtatttgg aaattgccat agacaatcct aagcaattca ctctttttga 2340 gttaaatgct tgtcttatgg aagactttga agtggctgga aatactttaa atccacctat 2400 tttgctttca tagttgtttc gttgtttgtt tccttctttt ctgggttttg ttgtggcttc 2460 tttcccagtt cgctttagaa gcctctctta taaattttaa gagcttgttt tctttgatgc 2520 attctctttt cttttt 2536 //