ID M90543; SV 1; circular; genomic DNA; STD; VRL; 8033 BP. XX AC M90543; XX DT 13-JUN-1992 (Rel. 32, Created) DT 05-FEB-2010 (Rel. 103, Last updated, Version 7) XX DE Cauliflower mosaic virus, complete genome. XX KW aphid transmission protein; capsid protein; DNA-binding protein; KW inclusion body matrix protein; movement protein; reverse transcriptase. XX OS Cauliflower mosaic virus OC Viruses; Ortervirales; Caulimoviridae; Caulimovirus. XX RN [1] RP 1-8033 RX DOI; 10.1104/pp.101.4.1395. RX PUBMED; 8310068. RA Chenault K.D., Melcher U.; RT "Cauliflower mosaic virus isolate CMV-1"; RL Plant Physiol. 101(4):1395-1396(1993). XX DR MD5; b73630cd8e318b585a9521709239a217. DR EPD; EP07015; CAMV_35MJ. DR EuropePMC; PMC1440423; 16571798. DR EuropePMC; PMC4498817; 26162084. XX CC Original source text: Cauliflower mosaic virus (individual_isolate CC CMV-1) DNA. XX FH Key Location/Qualifiers FH FT source 1..8033 FT /organism="Cauliflower mosaic virus" FT /mol_type="genomic DNA" FT /db_xref="taxon:10641" FT CDS 364..1347 FT /codon_start=1 FT /product="movement protein" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q83165" FT /protein_id="AAA21732.1" FT /translation="MDLYPEENTQSEQSHNSENNMQIFKSENSDGFSSDLMISNDQLKN FT ISKTQLTLEKEKIFKMPNVLSQVMKKAFSRKNEILYCVSTKELSVDIHDATGKVYLPLI FT TKEEITKRLSSLKPEVRKTMSMVHLGAVKILLKAQFRNGIDTPIKIALIDDRINSRKDC FT LLGAAKGNLAYGKFMFTVYPKFGISLNTQRVNQTLSLIHDFENKNLMNKGDKVMTITYI FT VGYALTNSHHSIDYQSNATIELEDVFQEIGNVQQSDFCTIQNDECNWAIDIAQNKALLG FT PKTKSQIGNSLQIGNSASSSNTENELARVSQNIDLLKNKLKEICGE" FT CDS 1349..1828 FT /codon_start=1 FT /product="aphid transmission protein" FT /db_xref="GOA:Q83166" FT /db_xref="InterPro:IPR004917" FT /db_xref="UniProtKB/TrEMBL:Q83166" FT /protein_id="AAA21733.1" FT /translation="MSITGQPHVYKKDTIIRLKPLSLNSNNRSYVFSSSKGNIQNIINH FT LNNLNEIVGRSLLGIWKINSYFGLSKDPSESKSKNPSVFNTAKTIFKSGGVDYSSQLKE FT IKSLLEAQNTRIKNLEKAIQSLDNKIEPEPLTKKEVKELKESINSIKEGLKNIIG" FT CDS 1830..2219 FT /codon_start=1 FT /product="DNA-binding protein" FT /db_xref="GOA:Q83167" FT /db_xref="InterPro:IPR004986" FT /db_xref="UniProtKB/TrEMBL:Q83167" FT /protein_id="AAA21734.1" FT /translation="MANLNQIQKEVSEVRSVQKSMKADIKAILELLGSQNPTKESLEAV FT AAKIVNDLTKLINDCPCNKEILEALGNQPKEQLIEQPKEKGKGLNLGKYSYPNYGVGNE FT ELGSSGNPKALTWPFKAPAGWPNQF" FT CDS 2201..3670 FT /codon_start=1 FT /product="capsid protein" FT /db_xref="GOA:Q83168" FT /db_xref="InterPro:IPR001878" FT /db_xref="InterPro:IPR001988" FT /db_xref="InterPro:IPR036875" FT /db_xref="UniProtKB/TrEMBL:Q83168" FT /protein_id="AAA21735.1" FT /translation="MAESILDRTINRFWYNLGEDCLSESQFDLMIRLMEESLDGDQIID FT LTSLPSDNLQVEPVMTTTDDSISEEESEFLLAIGETSEDESDSGEEPEFEQVRMDRTGG FT TEIPKEEDGEPSRYNERKRKTTEGRYFPTQPKTIPGQKQTSMGMLNIDCQTNRRTLIDD FT WAAEIGLIVKTNREDYLDPETILLLMEHKTSGIPKELIRNTRWNRTTGDIIEQVIDAMY FT TMFLGLNYSDNKVAEKIDEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPG FT YINQYLSKIPIIGEKALTRFRHEANGTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKF FT NKKCCSIGEASAEYGCKKTSTKKYHKKRYKKKYKVYKPYKKKKKFRSGKYFKPKEKKGS FT KQKYCPKGKKDCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIEEPYEGVQE FT VFILEYKEEEEETSTEESDDESSTSEDSDSD" FT CDS 3630..5672 FT /codon_start=1 FT /product="reverse transcriptase" FT /db_xref="GOA:Q83169" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR000588" FT /db_xref="InterPro:IPR021109" FT /db_xref="InterPro:IPR041373" FT /db_xref="UniProtKB/TrEMBL:Q83169" FT /protein_id="AAA21736.1" FT /translation="MMNHLLLKTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFV FT DTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTV FT YQQESGIDFIIGNNFCQLYEPFIQFTDRVIFAKNKSYPVHIANVTRAVRVGTEGFLESM FT KKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLSEEKLFITQQRMQKIEELLEKVCS FT ENPLDPNKTKQWMKASIKLSDPNKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKS FT PHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSF FT DCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFC FT CVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTH FT KPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKW FT TKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGINTELI FT CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPAHFLTRTDNTHFKSFVNLNYK FT GDSKLGRNIRWQAWLNHYSFDVEHIKGTDNHFVDFLSREFNKVNS" FT CDS 5776..7338 FT /codon_start=1 FT /product="inclusion body matrix protein" FT /db_xref="InterPro:IPR009027" FT /db_xref="InterPro:IPR011320" FT /db_xref="InterPro:IPR037056" FT /db_xref="UniProtKB/TrEMBL:Q83170" FT /protein_id="AAA21737.1" FT /translation="MENIEKLIMQEKILMLELDLVRAKISLARANGSSQQGDLPLHRET FT PVKEEAVHSALATFTPTQVKAIPEQTAPGKESTNPLMVSILPKDMNPVQTGIRLTVPGD FT FLRPHQGIPIPQKSELSSTVAPLRAESGIQHPHINYYVVYNGPHAGIYDDWGCTKAATN FT GVPGVAHKKFATITEARAAADAYTTSQQTDRLNFIPKGEAQLKPKSFAKALTSPPKQKA FT HWLTLGTKRPSGDPGPKEISFAPEITMDDFLYLYELGRKFDGEGDDTMFTTDNEKISLF FT NFRKNADPQMVREAYAAGLIKTIYPSNNLQEIKYLPKKVKDAVKRFRTNCIKNTEKDIF FT LKFRSTIPVWTIQGLLHKPRQVIEIGVSKKVVPTESKAMESKIQIEALTELAVKTGEQF FT IQSLLRLNDKKKIFVNMVEHDTLVYSKNIKDTVSEDQRAIETFQQRVISGNLLGFHCPA FT ICHFIERTVEKEGGSYKCHHCDKGKAIVQNASADSGPKDGSPPTRSIVEKGDVPTTSSK FT QVD" XX SQ Sequence 8033 BP; 2925 A; 1658 C; 1572 G; 1878 T; 0 other; ggtatcagag ccatgaatcg gtttaagacc aaaattcaag agggtaaaac ctcatcaaaa 60 tacgaaagag ttcttaactc taaagataaa agatctttca agatcgaaca tagttccctc 120 acaccggtga ccgacaggtt taccaccgta aggtttcaga acaacatcga aagcgtttac 180 gccaacttcg actctcagct caagtcgtcg tacgatggta gatctaaaaa gatcaagaat 240 ctaagcctta aaaatcttag atgctacgaa gccttcctca ggaagtacct tctggaacaa 300 taaatctctc tgagaatagt actctattga gtatccacag ataaaataat tttctgtgtt 360 gagatggatt tgtatccaga agaaaatacc caaagcgagc aatcgcataa ttctgaaaat 420 aatatgcaaa tatttaaatc agaaaattcg gatggattct cctccgatct aatgatctca 480 aacgatcaat taaaaaatat ctctaaaacc caattaactt tggaaaaaga aaagatattt 540 aaaatgccta acgttttatc tcaagttatg aaaaaagcgt ttagcaggaa aaacgagatt 600 ctctactgcg tctcgacaaa agaattatca gtggacattc acgatgccac aggtaaggta 660 tatcttcctt taatcactaa ggaggagata actaaaagac tttccagctt aaaacctgaa 720 gtcagaaaga ccatgtccat ggttcatctt ggagcggtca aaatattgct taaagctcaa 780 tttcgaaatg ggattgatac cccaatcaaa attgctttaa tcgatgatag aatcaattct 840 agaaaagatt gccttctcgg tgcagccaaa ggtaatctag catacggtaa gtttatgttt 900 actgtatacc ccaagtttgg aataagcctt aatacccaaa gagttaacca aaccttaagc 960 cttattcatg attttgagaa taaaaatctt atgaataaag gtgataaagt tatgaccata 1020 acctatatcg taggatatgc attaactaat agtcatcata gcatagatta tcaatcgaat 1080 gctacaattg aactagaaga cgtatttcaa gaaattggaa atgtccagca atctgatttt 1140 tgtacaatac aaaatgacga atgcaattgg gccattgata tagcccaaaa caaagcctta 1200 ttaggtccta aaaccaaatc ccaaattggt aatagtcttc aaataggaaa cagtgcttca 1260 tcctctaata ctgaaaatga attagctagg gtaagccaga acatagatct tttaaagaat 1320 aaattaaaag aaatctgtgg agaataaaat gagcattacg ggtcaaccgc atgtttataa 1380 aaaagatact attattagac taaaaccatt gtctcttaat agtaataata gaagttatgt 1440 ttttagttcc tcaaaaggga acattcaaaa tataattaat catcttaaca acctcaatga 1500 gattgtagga agaagcttac tcggaatatg gaagatcaac tcatacttcg gcttaagcaa 1560 agacccctcg gagtccaaat caaaaaaccc gtcagttttt aatactgcaa aaaccatttt 1620 taagagtggg ggggttgatt actcgagcca attaaaggaa ataaaatctc ttttagaagc 1680 tcaaaacact agaattaaaa atctagaaaa agcaattcaa tccttagata ataagattga 1740 accagagccc ttaactaaaa aagaagttaa agagctaaaa gaatcgatta actcgatcaa 1800 agaaggatta aagaatatta ttggctgaaa tggctaatct taatcaaatc caaaaagaag 1860 tctctgaagt ccgcagtgtc caaaaatcca tgaaagcgga tataaaagct atcttagaat 1920 tgctaggatc ccaaaatcct actaaagaaa gcttagaagc cgttgcagcg aaaatcgtta 1980 atgacttaac caagctcatc aatgattgtc cttgtaacaa agagatatta gaagccttag 2040 gaaatcagcc taaagagcaa ctaatagaac aacctaaaga aaaaggtaaa ggccttaatc 2100 taggaaaata ttcttacccc aattacggcg taggaaatga agaattagga tcctctggaa 2160 accctaaagc tttaacttgg cccttcaaag ctccagcagg atggccgaat caattttaga 2220 caggaccatt aaccggttct ggtataatct gggagaagat tgtctctcag aaagtcaatt 2280 cgatcttatg ataaggttaa tggaagagtc ccttgacggg gaccaaatta ttgatctaac 2340 ctctctacct agtgataact tgcaggtcga accagttatg acaactaccg acgactcgat 2400 ctcggaagaa gaatcagaat tccttctagc aataggagaa acatctgaag acgaaagcga 2460 ttcaggagaa gaacctgaat tcgaacaagt tcgaatggat cgaacaggag gaacggagat 2520 tcccaaagaa gaagatggtg aaccatctag atacaatgag agaaagagaa agaccacgga 2580 aggccggtac tttccaactc aaccaaagac cattccagga caaaagcaaa cgtctatggg 2640 aatgctcaac attgactgcc aaaccaatcg aagaacctta atcgatgatt gggcagcaga 2700 aatcggactg atagtcaaga ccaacagaga agactatctt gatccagaaa caatactact 2760 cttgatggaa cacaaaacat caggaatacc gaaggagtta atccgaaata caagatggaa 2820 ccgcactacc ggagatatca tagaacaggt gatcgatgcg atgtacacca tgttcttagg 2880 acttaactac tccgacaaca aggttgctga aaagatagac gagcaagaga aggccaagat 2940 cagaatgacc aagctccagc tctgcgacat ctgctacctt gaagaattta catgtgatta 3000 cgaaaagaac atgtacaaga cggaactggc ggatttccca ggatacatca accagtacct 3060 gtcaaaaatc cccatcatag gagaaaaagc gctaacacgc tttaggcatg aagctaacgg 3120 aaccagcatc tacagcttag gtttcgcggc gaagatagta aaagaagaac tatctaaaat 3180 ctgcgactta tccaagaagc agaagaagtt gaagaaattc aacaagaagt gttgcagcat 3240 cggagaagct tcagcagaat atggatgtaa gaagacatct accaagaagt atcacaagaa 3300 gcgatacaag aaaaaatata aggtctataa accttataag aagaagaaga aattccgatc 3360 aggaaaatac ttcaagccca aagaaaagaa gggctcaaag caaaagtatt gcccaaaagg 3420 caagaaagat tgcagatgtt ggatctgcaa tatcgaaggc cattacgcca acgaatgtcc 3480 taatcgacaa agctcggaga aggctcacat ccttcaacaa gcagaaaagt tgggcctcca 3540 gcccattgaa gaaccctatg aaggagttca agaagtattc atcttagaat acaaagaaga 3600 ggaagaagaa acctctacag aagaaagcga tgatgaatca tctacttctg aagactcaga 3660 ctcagactga gcaggtgatg aacgtcacca atcccaattc gatctacatc aagggcagac 3720 tctacttcaa aggatacaag aagatagagc ttcactgttt tgtagatacg ggagcaagct 3780 tatgcatagc atccaagttc gtcataccag aagaacattg ggttaatgca gaaagaccaa 3840 taatggtcaa aatagcagat ggaagctcaa tcaccatcag caaagtctgc aaagacatag 3900 acttgatcat agccggcgag atattcaaaa ttcccaccgt ctatcagcaa gaaagtggca 3960 tcgatttcat aatcggcaac aacttttgtc agctgtatga accattcata cagtttacag 4020 atagagttat cttcgcaaag aacaagtcct atcctgttca tattgcgaac gtaacaagag 4080 cagtgcgagt aggcaccgaa ggatttcttg aatcaatgaa gaaacgttca aagactcaac 4140 aaccggagcc agtgaacatt tctacaaaca agatagaaaa tccacttgaa gaaattgcta 4200 ttctttcaga ggggaggagg ttatcagaag aaaaactctt catcactcaa caaagaatgc 4260 aaaaaatcga agaactactt gagaaagtat gttcagaaaa tccattagat cctaacaaga 4320 ctaagcaatg gatgaaagct tcaatcaagc ttagcgaccc aaacaaagct atcaaggtta 4380 aacccatgaa gtatagccca atggatcgtg aagaatttga caagcaaatc aaagagttac 4440 tggaccttaa agtcattaag cccagtaaaa gccctcacat ggcaccagcc ttcttggtca 4500 acaacgaagc cgagaagcga agaggaaaga aacgtatggt agtcaactac aaagctatga 4560 acaaagccac cgtaggagac gcatacaatc ttcccaacaa agacgagtta cttacactca 4620 ttcgaggaaa gaagatcttc tcttccttcg actgtaagtc cggattctgg caagttctac 4680 ttgatcaaga atcaagacct ctaacggcgt tcacatgccc acaaggtcac tacgaatgga 4740 atgtggtccc tttcggccta aagcaggcac catccatatt ccagagacac atggacgaag 4800 catttcgtgt gttcagaaag ttctgttgcg tttatgtcga tgacattctc gtattcagta 4860 acaacgaaga agatcaccta cttcatgtag caatgatctt acaaaagtgt aatcaacatg 4920 gaattatcct ttccaagaag aaagcgcaac tcttcaagaa gaagataaac ttccttggtc 4980 tagaaataga tgaaggaaca cacaagcctc aaggacatat cttggaacat atcaacaaat 5040 tcccagatac ccttgaagac aagaagcaac ttcagagatt cttaggcatc ctaacatatg 5100 cctctgatta tattccgaag ctagctcaaa tcagaaagcc tctgcaagcc aagcttaaag 5160 agaatgttcc atggaaatgg acaaaagagg acaccctcta catgcaaaag gtgaagaaaa 5220 atctgcaagg atttcctcca ctacatcatc ccttaccaga ggagaagctg atcatcgaga 5280 ccgacgcatc agatgactac tggggaggta tgttaaaagc tatcaaaatt aacgaaggta 5340 ttaatactga gttaatttgc agatacgcat ctggaagctt taaagctgca gaaaggaatt 5400 accacagcaa tgacaaagag acactggcgg taataaatac tataaagaaa ttcagtatct 5460 atctaactcc tgctcatttc ctgaccagaa cagataatac tcatttcaag agttttgtta 5520 accttaatta caaaggtgat tcaaaacttg gaagaaacat cagatggcaa gcatggctta 5580 accactattc atttgatgtt gaacatatta aaggaaccga caaccacttt gtggacttcc 5640 tttcaagaga attcaataag gttaattcct agttgaaatc cgaagataag attcccacac 5700 acttgtggct gatatcaaaa ggctactgcc tatataaaca catctctgga gactgagaaa 5760 atcagacctc caagcatgga gaacatagaa aaactcatca tgcaagagaa aatactaatg 5820 ctagagctcg atctagtaag agcaaaaata agcttagcaa gagctaacgg ctcttcgcaa 5880 caaggagacc tccctctcca ccgtgaaaca ccggtaaaag aagaagcagt tcattctgca 5940 ctggccactt ttacgccaac tcaagtaaag gctattccag agcaaacggc tcctggtaaa 6000 gaatcaacaa atccgttgat ggttagtatc ttgccaaaag atatgaaccc agttcaaact 6060 gggataaggc ttacagtgcc aggggacttt ttacgtcctc atcagggaat tccaatccca 6120 caaaaatctg agcttagcag cacagttgct cctctcagag cagaatcggg tattcaacac 6180 cctcatatca actactacgt tgtgtataac ggtccacacg ccggtatata tgatgactgg 6240 ggttgtacaa aggcggcaac aaacggcgtt cccggagttg cacacaagaa gtttgccact 6300 attacagagg caagagcagc agctgacgcg tacacaacaa gtcagcaaac agacaggttg 6360 aacttcatcc ccaaaggaga agcccaactc aagcccaaga gctttgcgaa ggccttaacc 6420 agcccaccaa agcaaaaagc ccactggctc acgctaggaa ccaaaaggcc cagcggtgat 6480 ccaggcccaa aagagatctc ctttgccccg gagatcacaa tggacgattt cctctatctt 6540 tacgaacttg ggaggaagtt cgacggagaa ggtgacgata ccatgttcac cactgataat 6600 gagaagatta gcctcttcaa tttcagaaag aatgctgacc cacagatggt tagagaggcc 6660 tacgcagcag gtctcatcaa gacgatctac ccgagtaata atctccagga gatcaaatac 6720 cttcccaaga aggttaaaga tgcagtcaaa agattcagga ctaactgcat caagaacaca 6780 gagaaagata tatttctcaa gttcagaagt actattccag tatggacgat tcaaggcttg 6840 cttcataaac caaggcaagt aatagaaatt ggagtctcta agaaagtagt tcctactgaa 6900 tcaaaggcca tggagtcaaa aattcagatc gaggctctaa cagaactcgc cgtgaagact 6960 ggcgaacagt tcatacagag tcttttacga ctcaatgaca agaagaaaat cttcgtcaac 7020 atggtggagc acgacactct cgtctactcc aagaatatca aagatacagt ctcagaagac 7080 caaagggcta ttgagacttt tcaacaaagg gtaatatcgg gaaacctcct cggattccat 7140 tgcccagcta tctgtcactt catcgaaagg acagtagaga aggaaggtgg ctcctacaaa 7200 tgccatcatt gcgataaagg aaaggctatc gttcaaaatg cctctgccga cagtggtccc 7260 aaagatggat ccccacccac gaggagcatc gtggaaaaag gagacgttcc aaccacgtct 7320 tcaaagcaag tggattgatc tcacatctcc actgacgtaa gggatgacgc acaatcccac 7380 tatccttcgc aagacccttc ctctatataa ggaagttcat ttcatttgga gaggacacgc 7440 tgaaatcacc agtctctctc tacaaatcta tctctctcta ttttctccgt aataatgtgt 7500 gagtagttcc cagataaggg aattagggtt cttatagggt ttcgctcatg tgttgagcat 7560 ataagaaacc cttagtatgt atttgtattt gtaaaatact tctatcaata aaatttctaa 7620 ttcctaaaac caaaatccag tactaaaatc cagatctcct aaagtcccta tagatctttg 7680 tcgtgaatat aaaccagaca tgagacgact aaacctggag cccagacgcc gttcgaagct 7740 agaagtaccg cttaggcagg aggccgttag ggaaaagatg ctaaggcagg gttggttacg 7800 ttgactcccc tgtaggtttg gtttaaatat gatgaagtgg acggaaggaa ggaggaagac 7860 atggaaggat aaggttgcag gccctgtgca aggtaagaag atggaaattt gatagaggta 7920 cattactata cctatactat aagctgaggg aatcgttgtt tttaccctat atcatctaat 7980 aaccccttat cgatttaaag aaataatccg cataagcccc caaacaaaaa att 8033 //