ID M89923; SV 1; linear; genomic DNA; STD; VRL; 7568 BP. XX AC M89923; XX DT 22-MAY-1992 (Rel. 31, Created) DT 15-DEC-2005 (Rel. 86, Last updated, Version 4) XX DE Sugarcane bacilliform Mor virus ORF1, ORF2, and ORF3 genes, complete cds. XX KW . XX OS Sugarcane bacilliform MO virus OC Viruses; Ortervirales; Caulimoviridae; Badnavirus. XX RN [1] RP 1-7568 RX PUBMED; 8423447. RA Bouhida M., Lockhart B.E., Olszewski N.E.; RT "An analysis of the complete sequence of a sugarcane bacilliform virus RT genome infectious to banana and rice"; RL J. Gen. Virol. 74(Pt 1):15-22(1993). XX RN [2] RP 1-7568 RA Bouhida M., Lockhart B.E., Olszewski N.E.; RT ; RL Submitted (12-JUN-1993) to the INSDC. RL Department of Plant Biology, University of Minnesota, St. Paul, MN 55108, RL USA XX DR MD5; cfd30e0394cd2b70a31a5f6381ffa970. DR EuropePMC; PMC4974523; 27399761. DR EuropePMC; PMC5537673; 28696406. DR EuropePMC; PMC5769356; 29334902. XX FH Key Location/Qualifiers FH FT source 1..7568 FT /organism="Sugarcane bacilliform MO virus" FT /mol_type="genomic DNA" FT /db_xref="taxon:362399" FT primer_bind 1..17 FT /note="methionine tRNA binds and primes minus strand FT synthesis" FT CDS 611..1168 FT /codon_start=1 FT /product="ORF1" FT /db_xref="InterPro:IPR010746" FT /db_xref="UniProtKB/TrEMBL:Q86996" FT /protein_id="AAA47452.1" FT /translation="MKSEAEWETQFTAWKNSHIFENANQELILGTKISNSDLNHNLRTT FT CYRVDLGYKVLLTSQQKAFEHRKELFSEGRKHLADQSRKLQLVADKAEQSLIIQKEQRA FT RLKKVEDGLSTLSREIHDLRVEYLKRRPLSKEDVAELVLTISEQPKLIEKQTELLLEQV FT KKLVETTRREVETVHHMVKRIS" FT CDS 1168..1539 FT /codon_start=1 FT /product="ORF2" FT /db_xref="UniProtKB/TrEMBL:Q86997" FT /protein_id="AAA47453.1" FT /translation="MSINEPAYAKALEKTKNILGESGEGFVAGNASITTLTKQNNLTIE FT LLLTLHGKIKSLEDKIQDLKEDLTKKADKPSSSGLDKQLDDLAKRIEGLRTGAAPVKVV FT ERGKLKVHANPFELLRKIQ" FT CDS 1536..7151 FT /codon_start=1 FT /product="ORF3" FT /function="'viral coat; aspartic protease; reverse FT transriptase; ribonuclease H'" FT /db_xref="GOA:Q86998" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR001878" FT /db_xref="InterPro:IPR001969" FT /db_xref="InterPro:IPR018061" FT /db_xref="InterPro:IPR021109" FT /db_xref="InterPro:IPR041373" FT /db_xref="UniProtKB/TrEMBL:Q86998" FT /protein_id="AAA47454.1" FT /translation="MTQRVRGTGSSTITEDGALLDHQIRDYRRAQHAKHEAQRIAGQAL FT AFLRVTSDDPREKTLEMLMQPDVELTRSMKKRARAFPAEVLYGPRSDDIHHKVFQGSSS FT QDILLIDDNQLDMTFIKEETFEQLEQAGLRYIHPGILAVRIQPLHPDWSGKLVFIVFRD FT IRDNPPRVLGAMEIDLSKGPQMVYVINSFMTTIKDFFHGIQLTVKVKGYEGWQGEANLH FT IERLITARLSNTTNVYFKYKVEGVASFIKTKGIKAIEATKKSVKGIRGGEWNILPSKLE FT VVMQPTKVQTTENYDGTTSFRFTNYEGASSSKPVEHNSDDEAYMALFEEEEEEDDITFL FT NRILSKYSTQQKVVGEEEFSPEEDQIISDFLGKTEEAYPAEIEEEYPALRRLEQLMKTK FT VVVQEIEEPSQPVEAKMSTSTGSSAMIPANMDMDGNMPGYAPAQEARGWDSGETSRRNY FT GGHSRKWKDESQFFNLPSAMATSGAMLVLTMGNYAKEFDRWQSINTNLLASQTFENAED FT KITRIENLLGETEKLMFQTWRMAFPTAFEAMKTQATGTNGTQNVFSQMKRILLGEVPEQ FT GTTNTQDAAYKRIKSLVCQEMTYPAIMRYLVGYRNLAARSGRAWVNNELTDEFFTKLPG FT KLGDRVKEAFKKKYPGVERHVPAATRFTYDYLEEICTENNFQKQLRSLNFCKGFPVVNP FT VGTRKYGKKYGTRKARSYRGKPHKSHVRIEKKKYLQQREKKCRCYVCGSPDHLMKDCKS FT PMKRQERVNLANELDIPDGYDLVSVGYDESDIDEIYSVSENEECQAHLGLNEDEQLPKV FT PQTFEEWEEYYKDEFIMMADIEESENSDEEKGPFLVGPKGGFRHQMEVSYKQYKCEHDW FT DFTRTRVKPCKRCLKTVTKGQYIYCRTCKITVCHECSEFCYNIKIEGAEAVKPPEKKSN FT YELLAKQLLIENSKLKMEKEILIEELNKEIKAHQETKKGKELYIEEASTEVENEIETWK FT SRAELFEALYNEEVKKNKASTSSVTEGMYQVQIDHLRKELREVEATLEVNKVEESEEEA FT EEVMMASAVKDEMYRFPVIIEVPEVGKVQLTALLDTGATRSCINQVFIEEKFLQPTKFK FT VKIHGVNSVTKLDRQVKDGAKLWAGENWFRLPITYVGPMYMGEKTQMLIGCNFMQSLAG FT GVRLEGRTVTFYKYIASIKANEYLQAEAEEILVATSEQEFINRSFMSKNKRLLEEMKEQ FT GYMGEDTLAHWNKNQIKCKIELRNPDLIIKDKPQTLLNIQKKEAMRKHIDALLERKVIR FT PSKSPHRTNAFIVESGTSIDPKTGKEIRGKPRLVFNYKRLNDNTWPDQYSLPGINALLK FT NVARAKIFSKFDLKSGFHQVAMDEESIPLTAFSAYNELYEWLVMPFGLKNAPAIFQRKM FT DQCFRGTEGFIAVYIDDILVFSEDEEQHAEHLWKMLQICKRNGLILSPSKYKIGVKKVD FT FLGSTIGDNQLAVQEHIIKKIAEFDDEKLKTKEGLKSWLATLNYARNHIKDMGKLLGPL FT YPKTSEKGERRLNSEDWKLINRIKTMVRTLPNLTIPPEDAYIIIETDACATGWGAVCKW FT KKNKADPRNTEQICRYASGKFDKPKGTCDAEIYGVMNGLEKMRLFYLDKREITVRTDSS FT AIERFYNKSAEHKPSEIRWIRFMDYITGAGPEIVIEHIKGKSNGLADILSRLKAKLAQN FT EPTEEMILLTQAIREVIPYPDHPYTEQLREWGNKILDPFPTFKKDMFERTEQAFMLTEE FT PVLLCACRKPAIQLVSRTSANPGRKFFKCAMNKCHCWYWADLIEEHIQDRIDEFLKNLE FT VLKTGGVQTMEEELMKEVTKLKIEEQEFEEYQATPRAMSPVAAEDVLDLQDVSNDD" XX SQ Sequence 7568 BP; 2602 A; 1468 C; 1809 G; 1689 T; 0 other; tggtatcaga gcgaggtatg atttctgtat ccgctatgtt ctaaatttct tagataaggg 60 gccaagggct ctgctgatga gtttaaggac aactacttgt gcaagttaca tagcatgata 120 cgtcgaaagg ctgaaaatat ccaaaatact gtctattgtt tggaaaacta ggttgttcta 180 ggggagaacg ttaatgaggg gtaagcttag ttcattctga aaatcaaggt ctgtgattgt 240 agttgagctc agtaattaag tgctgaagga agtaagatct aggtaggaca aaagtacccg 300 tcaaggcagg aggccgctaa ggggaaaaga gccagacgat caaagctttt tcagcacggt 360 tgttgagttt agctatcaag aaatagcctt gagactaaga ttcatcacta agaactgcct 420 actcaagcct ccctgaatcc gcctattagt acaaacgaga caacagtata aggagaaact 480 atatgcctgt aagacttaag tgcaaaagta acctctggaa ctgggtagaa gtctagagac 540 tctgaaagca tcccaaggta tcccttatct ccattagaac actgtgatac agttcttgta 600 tctaccttgc atgaaatctg aagccgagtg ggaaacacag tttaccgctt ggaagaattc 660 ccatatattc gaaaacgcta accaagagct tattcttgga acaaagatct ctaattctga 720 tttaaatcat aatctgcgta ctacttgcta tagagtagat cttggataca aagttctgct 780 aacctcgcag cagaaggcgt tcgagcacag gaaggagcta ttctctgaag ggagaaagca 840 ccttgctgat caaagcagga agctacaact cgtagctgac aaagcggaac aatcgctgat 900 cattcagaag gaacagcgtg cacgtctgaa gaaggttgaa gacggcctat cgaccctcag 960 tagggagatc cacgaccttc gtgtggaata cctgaagcgg aggcctttat caaaagaaga 1020 cgttgctgaa cttgtgctga caatctcaga gcagcccaag cttatcgaga agcagaccga 1080 gttgctcctc gagcaggtca agaagctggt ggagaccaca cgtagagaag ttgagacggt 1140 tcaccacatg gtgaaacgta tcagctgatg agtatcaacg aaccagcata cgcaaaggct 1200 ctcgagaaga ccaagaatat ccttggagag tcaggagaag gcttcgttgc aggaaacgca 1260 agcatcacaa cgcttaccaa gcagaataac ttaaccattg agttactgct taccctgcac 1320 ggaaagatca agtctttgga ggacaaaatc caagacttga aggaagacct taccaagaag 1380 gcggacaagc ccagctcatc cgggctagac aagcaactcg acgacctcgc caagaggatc 1440 gaagggttga ggacaggagc agcacctgtc aaggtagttg aaagggggaa gctaaaagtt 1500 cacgctaatc cctttgaact cctgaggaag atccaatgac gcaaagagtc agaggtaccg 1560 gctccagtac catcacagaa gatggagcac tcttggatca ccagatccga gattacagaa 1620 gagcccagca tgcaaaacat gaggctcaga gaatcgcagg tcaagcactt gcttttctac 1680 gggttacctc agacgacccg agagagaaga ccctggagat gctcatgcag cctgatgtgg 1740 agctaaccag gagcatgaag aagagagcca gagctttccc agcagaagtt ctgtatggcc 1800 caagaagtga tgatattcat cacaaagtct ttcaagggag ctctagccag gatatcctcc 1860 tgattgatga caatcagctt gatatgacct ttatcaagga ggaaacattc gagcaattgg 1920 agcaggcagg actccggtat attcatcccg gaatactagc tgttagaata cagcctctgc 1980 atccagactg gtcaggaaaa ctggttttca tagttttccg tgacatcaga gataacccac 2040 caagagtact tggagctatg gaaattgatc tgagcaaagg accacaaatg gtctatgtga 2100 tcaatagctt catgacaacg ataaaggatt tctttcatgg aatccagctt actgtcaagg 2160 tgaagggtta tgaaggttgg caaggagagg ccaacttaca cattgaaagg ttgataactg 2220 caagattgtc aaatacaacc aatgtgtatt tcaagtataa ggttgaagga gtggcgtctt 2280 ttatcaagac caaaggtata aaagctattg aagccactaa aaagagtgtg aagggcatca 2340 gaggaggaga atggaacatt ctcccatcaa agctagaggt agtcatgcaa cctaccaagg 2400 tgcagactac agaaaattat gatggcacaa catccttcag attcacaaat tatgaaggtg 2460 ccagttcttc aaagccagta gagcacaact cagatgatga ggcatatatg gcgctctttg 2520 aagaagaaga ggaagaggat gacatcactt tcctcaaccg aatcttatca aagtactcta 2580 cgcagcaaaa ggtagtggga gaagaagaat tttccccaga agaagaccag attatttctg 2640 attttcttgg aaaaactgaa gaagcctacc ctgctgaaat tgaagaagag tacccagcgc 2700 taagaagact tgaacaactc atgaaaacaa aagttgttgt tcaagagatt gaagagccat 2760 cccagccagt tgaagctaag atgagtacaa gcactggatc atctgctatg atccctgcaa 2820 acatggacat ggatggaaac atgcctggct atgcaccagc acaagaagcc agaggatggg 2880 attcaggaga gactagcaga agaaactatg gtggacattc tagaaaatgg aaggatgaaa 2940 gtcagttctt taatcttcca tctgccatgg caacatctgg agcgatgcta gttctcacaa 3000 tgggaaatta tgcaaaggag tttgatagat ggcagtctat caacacaaat ttattagcat 3060 cccagacatt tgagaatgca gaagacaaga tcaccaggat tgagaatctt cttggtgaaa 3120 cagaaaagct aatgttccag acctggagaa tggccttccc aacggccttt gaagcaatga 3180 aaactcaagc cacaggaaca aatggaacac agaatgtctt ctcacaaatg aagaggatat 3240 tgcttggaga ggttcctgaa caaggaacaa caaacactca agatgcagcc tacaagagga 3300 taaaatctct tgtctgccaa gaaatgacat atccagcaat catgagatat ctagttggat 3360 atagaaattt ggctgccaga tcaggaagag cttgggttaa caatgagtta actgatgaat 3420 tcttcaccaa gctaccagga aaattaggag accgggtaaa agaagctttc aagaagaagt 3480 atcccggagt tgaaaggcat gtcccagcgg ccacaagatt tacatatgat tacctggaag 3540 aaatttgtac agaaaacaac ttccagaagc aactcagaag cctgaatttc tgcaaaggct 3600 tcccagtggt caatcctgtt ggaacaagga aatatggaaa gaaatatggg acaagaaaag 3660 caagatctta cagaggcaag ccacacaagt ctcatgtaag aatagagaag aagaaatatc 3720 tgcagcaaag agagaagaaa tgcagatgct atgtctgtgg ttcaccagat cacctgatga 3780 aggactgcaa aagtcctatg aagagacaag aaagggtgaa cttggcaaat gaattggata 3840 tcccagatgg ctatgaccta gtctctgttg gatatgatga atcagacatc gatgaaatct 3900 attcagtatc agaaaatgaa gaatgtcagg cacatctagg cctgaatgaa gatgaacagc 3960 taccaaaggt tcctcaaacc tttgaagaat gggaagagta ctacaaagat gagttcatca 4020 tgatggctga tattgaagaa agtgagaatt cagatgaaga aaagggtccg ttccttgtag 4080 gaccaaaagg aggtttcagg caccaaatgg aagtctcata caagcaatac aagtgtgagc 4140 atgattggga ttttacaaga acaagggtaa aaccttgcaa aagatgcctg aagacagtga 4200 caaaggggca gtacatatac tgcaggacat gcaagatcac agtttgtcat gaatgctcag 4260 aattctgcta caatatcaaa atcgagggag cagaagcagt caagccccca gaaaagaagt 4320 caaactatga gctgctggcc aaacagttgc tgattgaaaa tagcaagctc aaaatggaga 4380 aagagattct tattgaagaa ctcaacaagg aaataaaagc tcatcaagaa acaaagaaag 4440 gaaaagagct ttacattgaa gaagcttcca cggaggtgga aaatgaaatt gaaacatgga 4500 agagtagggc agaattgttt gaagccctat acaatgaaga agtaaagaag aataaagcca 4560 gtacatccag tgtgacagaa gggatgtacc aagtccagat cgaccaccta agaaaagaac 4620 tcagggaagt tgaggcaacc cttgaggtaa acaaggtcga agaatctgaa gaagaagctg 4680 aagaagtgat gatggcttca gcagttaaag atgagatgta cagattccca gtgatcatag 4740 aagttccaga agttggaaag gtacaactca cagctctctt ggatacaggt gcaacaaggt 4800 cctgtatcaa ccaagtattc attgaagaga agtttctcca acccacgaag ttcaaagtca 4860 agatacatgg ggtaaactca gtaacaaagc ttgaccgaca agtcaaagat ggtgcaaagc 4920 tttgggcagg agaaaattgg ttcagactcc cgatcacata tgttggacca atgtacatgg 4980 gagaaaagac gcagatgctc ataggatgca attttatgca atccttagca ggaggagttc 5040 ggctggaagg aagaacagtg accttctaca aatacattgc cagtattaag gcaaatgagt 5100 acttgcaagc cgaagcagag gaaattcttg ttgctacctc agaacaagaa tttatcaaca 5160 gaagtttcat gagcaagaac aagaggcttc ttgaggagat gaaggagcaa ggatatatgg 5220 gtgaagatac cttggctcac tggaacaaga atcagatcaa gtgcaagatt gaattgagaa 5280 acccagatct gattattaaa gacaagcctc agacactatt gaacattcag aagaaagaag 5340 caatgaggaa gcatattgat gctctcctag aaagaaaagt catcaggcct tcgaagagtc 5400 ctcacaggac caatgcattc attgtggaat cgggtacatc aattgacccg aagactggaa 5460 aggaaatcag aggaaaacca agactggttt tcaattacaa gaggctaaat gacaacacat 5520 ggccggatca atattcattg cccggaatca atgctctact aaaaaatgtt gcaagagcaa 5580 agatcttctc aaagtttgat ttgaagagcg ggtttcatca agtcgccatg gatgaagaaa 5640 gtattccatt aacagcattt tcagcataca atgagctgta tgaatggctg gtcatgccat 5700 ttggattaaa gaatgcacca gcaatcttcc agagaaaaat ggaccagtgt ttcagaggaa 5760 cagaagggtt catagctgtg tatattgatg acatattggt tttctcggag gacgaagaac 5820 agcatgctga acatctgtgg aagatgcttc aaatctgcaa aaggaatgga ctaatcttga 5880 gtccgtcaaa gtacaagata ggagttaaga aggtggattt cttgggaagc acaattggtg 5940 acaaccaatt agcagtccaa gaacatatta ttaagaagat tgcagaattt gatgacgaga 6000 agttgaagac aaaagaaggt cttaaatcct ggctagcaac actgaactat gccagaaacc 6060 acatcaaaga tatgggcaag cttcttggcc cattatatcc aaagacctca gagaaaggtg 6120 agcgaaggct caattcagaa gattggaagc tgatcaatag gatcaagaca atggtgagaa 6180 cgcttccaaa tctcactatt ccaccagaag atgcatacat tatcattgaa acagatgcat 6240 gtgcaactgg atggggagca gtatgcaagt ggaagaaaaa caaggcagac ccaagaaata 6300 cagagcaaat ctgtaggtat gccagtggaa aatttgataa gccaaaagga acctgtgatg 6360 cagaaatcta tggggttatg aatggcttag aaaagatgag attgttctac ttggacaaaa 6420 gagagatcac agtcagaact gacagtagtg caatcgaaag gttctacaac aagagtgctg 6480 aacacaagcc ttctgagatc agatggatca ggttcatgga ctacatcact ggtgcaggac 6540 cagagatagt cattgaacac ataaaaggga agagcaatgg tttagctgac atcttgtcca 6600 ggctcaaagc caaattagct cagaatgaac caacggaaga gatgatcctg cttacacaag 6660 ccataaggga agtaattcct tatccagatc atccatacac tgagcaactc agagaatggg 6720 gaaacaaaat tctggatcca ttccccacat tcaagaagga catgttcgaa agaacagagc 6780 aagcttttat gctaacagag gaaccagttc tactctgtgc atgcaggaag cctgcaattc 6840 agttagtgtc cagaacatct gccaacccag gaaggaaatt cttcaagtgc gcaatgaaca 6900 aatgccattg ctggtactgg gcagatctca ttgaagaaca cattcaagac agaattgatg 6960 aatttctcaa gaatcttgaa gttctgaaga ccggtggcgt gcaaacaatg gaggaggaac 7020 ttatgaagga agtcaccaag ctgaagatag aagagcagga gttcgaggaa taccaggcca 7080 caccaagggc tatgtcgcca gtagccgcag aagatgtgct agatctccaa gacgtaagca 7140 atgacgattg aggaggcatt gacgtcaggg atgaccgcag cggagagtac tgggcccatt 7200 cagtggatgc tccactgagt tgtattattg tgtgcttttc ggacaagtgt gctgtccact 7260 ttcttttggc acctgtgcca ctttattcct tgtctgccac gatgcctttg cttagcttgt 7320 aagcaaggat cgcagtgcgt gtgtgacacc accccccttc cgacgctctg cctatataag 7380 gcaccgtctg taagctctta cgatcatcgg tagttcacca catgatcatt tgagcaagtt 7440 tgcttgaata aaagaactat cattccgcat acctgatcct atagtcctag cttgagaaca 7500 agagcgaagt ctatagttga gatcctaaga gaaactcgag gtttttcggg tttcctgggc 7560 gcgttccc 7568 //