ID M81486; SV 1; linear; genomic RNA; STD; VRL; 3591 BP. XX AC M81486; XX DT 03-NOV-1992 (Rel. 33, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 5) XX DE Poa semilatent virus beta genomic segment beta-A, beta-B, beta-C and beta-D DE protein genes, complete cds. XX KW . XX OS Poa semilatent virus OC Viruses; Riboviria; Virgaviridae; Hordeivirus. XX RN [1] RP 1-3591 RX PUBMED; 1645144. RA Agranovsky A.A., Karasev A.V., Novikov V.K., Lunina N.A., Loginov S., RA Tyulkina L.G.; RT "Poa semilatent virus, a hordeivirus having no internal polydisperse RT poly(A) in the 3' non-coding region of the RNA genome"; RL J. Gen. Virol. 73(Pt 8):2085-2092(1992). XX RN [2] RP 1-3591 RX DOI; 10.1006/viro.1996.0217. RX PUBMED; 8623558. RA Solovyev A.G., Savenkov E.I., Agranovsky A.A., Morozov S.Y.; RT "Comparisons of the genomic cis-elements and coding regions in RNA beta RT components of the hordeiviruses barley stripe mosaic virus, lychnis RT ringspot virus, and poa semilatent virus"; RL Virology 219(1):9-18(1996). XX RN [3] RP 1-3591 RA Solovyev A.; RT ; RL Submitted (13-AUG-1993) to the INSDC. RL Andrey G. Solovyev, Institute of Biochemistry and Plant Virology, RL Braunschweig, D-38104, Germany XX DR MD5; eda6ab6531366e4e9d3fb33007f2f9f4. DR RFAM; RF01072; TMV_UPD-PK3. DR RFAM; RF01075; TLS-PK1. XX CC On Aug 2, 1996 this sequence version replaced gi:333326. XX FH Key Location/Qualifiers FH FT source 1..3591 FT /organism="Poa semilatent virus" FT /chromosome="RNA beta" FT /mol_type="genomic RNA" FT /db_xref="taxon:12328" FT CDS 97..699 FT /codon_start=1 FT /product="beta-A protein" FT /function="coat protein" FT /db_xref="GOA:Q85078" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q85078" FT /protein_id="AAB05576.1" FT /translation="MPNISLTTKGGGHYDEDLWFSQVVSQGLYAEWWVLSDNWEKFLDN FT LRGVNFGVSSSRSQVSDYVAALDRDLPADVDRRFAGPRGQLGSPNYVSAPIFYRINRSL FT VGDITRLARITDQPSNNRDVELSRVKKLSGQPTPPPGTDNQMAIRDVQSLRDGSLSFSY FT TLINELVGAQLAAYTVRRFETEFGLQWLPVQAQGQRD" FT CDS 826..2556 FT /codon_start=1 FT /product="beta-B-protein" FT /function="virus cell-to-cell movement protein" FT /db_xref="GOA:Q85079" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q85079" FT /protein_id="AAB05577.1" FT /translation="MSDGLRTNHQNETPGVQSEKMELRQTTSDDTQNQADSGAKSHDTN FT TSRVDETAKTTDVKESPSGESLSGVSAVSGGTDKGEKSAVRKEAGESKESPKSVPSDGG FT EVKHVDTETKAKSKRKKKNKKTPKEGTSKTTSESSSAKNVESKESKKQTKPKAVSPSSD FT TSKIASEVGSAKKATKKESKKQTKDKGSAEDLNANTKLKAKASEQKGPTIPGTSAEASR FT IDLLQSSTAEKFTKNDVRRTALVNEFVAQIHKFCIEQGFEPTGRQYMRARANLFELVGL FT RNLYMEHLKKTAAKACNFTKDRIRRKLFLTSNHKPSVDFLVGIVSGVPGCGKSTLVRKL FT LDSPISCYVALANPATERDYRGTSNVMTLDDLLLAKVPMSSDLLIVDEYTLAESAEILL FT LQRRVRSSLVLLVGDVAQGRSNNASNIEYLTLPVIYRKITSHRIGEETAKACSKQGNRI FT RSAGRKDKLILVDYEGETEETEKNLAFTEETRDDVKDCGYDCSLVSEVQGLEYESVTLF FT LRNTDRAAASDHHKRTVSMTRHKSLLIIRAEQEIGQPFLMGELSVSSKRPSNAHVYSSE FT " FT CDS 2559..2969 FT /codon_start=1 FT /product="beta-D protein" FT /function="virus cell-to-cell movement protein" FT /db_xref="GOA:Q02477" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q02477" FT /protein_id="AAB05578.1" FT /translation="MPAKTTSVGSRPNKYWPIVAGIGVVGLFAYLIFANQKHSTESGDN FT IHKFANGGSYRDGSKCISYHRNNPFAYGNASSPGMLLPTLFTIIGIVSYLWATRGEIMG FT GNSPLLGHNCGEECAGECVRGLDRQELPPNSV" FT CDS 2773..3261 FT /codon_start=1 FT /product="beta-C protein" FT /function="virus cell-to-cell movement protein" FT /db_xref="GOA:Q02476" FT /db_xref="InterPro:IPR007617" FT /db_xref="UniProtKB/TrEMBL:Q02476" FT /protein_id="AAB05579.1" FT /translation="MAMPHLLGCSCPLCSQSSESFPIYGPPEERLWEETPPSSATIVER FT NAPENVFVAWIDRNYLLILCSLALLSVSLAYIYFTSGNNNPYVKGGYFYQDLNSVEVRF FT GEHPVDPKVIASIHHWQKNPFGVSPLWEGLNNLVSSLVSALKFYVGLLFLLLLIIIFK" XX SQ Sequence 3591 BP; 1049 A; 718 C; 842 G; 982 T; 0 other; cgacctggtc gttgtgcgaa actctaccag tttcgcgttc ttttagctag tgtatatatt 60 aggattagaa tttgttttca acccgtgcat ttcattatgc cgaacatctc tcttactacg 120 aaaggtggtg gacactatga tgaagatctt tggttttctc aagtagtttc tcaagggctt 180 tatgcagaat ggtgggttct ctcagataac tgggaaaaat ttctcgacaa tttgagaggc 240 gttaacttcg gagtctcctc atccagatct caagtttctg actacgtagc agcgttagat 300 cgtgatctac ctgctgatgt tgacagacgc ttcgctggac cgaggggtca acttggctca 360 cctaactacg tatcagcacc tatattctac cgaattaatc gatctcttgt tggggacatt 420 actaggttgg ctcgcatcac ggaccaaccc agtaacaaca gagacgttga attgagtaga 480 gtcaagaagc tatcaggtca accgacacca ccgcccggca ctgacaacca aatggctatc 540 agagatgtgc agtcgttgcg agatggctct ctcagcttct cctacactct catcaatgag 600 ctagttgggg ctcagttggc ggcgtatact gtgagacgtt ttgagactga atttgggctg 660 cagtggctac cagtgcaggc tcaaggtcag cgggattgat tttctttccc tcttttcctc 720 ttttttactt ttagctttaa actttgtttt ttaacatttc ttttattttt aaaaagttct 780 tttttaggga gttacttttg atgtttatgt tttttgcttt cggccatgtc tgatgggttg 840 cggactaacc accaaaacga aacgcctggt gtacaaagtg aaaagatgga gcttcgtcag 900 actacttctg atgacaccca gaatcaagca gattctggtg cgaaatctca tgatactaat 960 acatcacgtg tggatgagac cgcaaagaca accgatgtca aagaatctcc ttcgggagaa 1020 tcgttgtcgg gagttagtgc tgtttcgggg ggaaccgaca agggtgagaa atcagccgta 1080 aggaaagagg cgggagagag caaagaatct cctaaatctg tgcctagtga tggtggagaa 1140 gtaaaacatg ttgatacgga aacgaaagcg aagagtaaga gaaagaagaa aaataagaaa 1200 acgcctaagg agggcacttc taagactact agcgaatcca gttctgccaa gaacgtggag 1260 tcgaaagaat ctaagaagca aacgaaacca aaggcggtgt ctccttcatc ggacacttct 1320 aagattgcta gcgaagttgg ttctgcaaag aaagcaacta agaaagaatc taagaagcaa 1380 acgaaagata aaggttctgc tgaagactta aatgcaaaca ctaaattaaa ggctaaagct 1440 agtgagcaga aaggaccaac gataccagga accagtgcag aggcctcacg aattgattta 1500 ctacaaagtt ctacagcgga gaaattcact aagaacgatg tgcgcagaac ggctttggtc 1560 aatgagtttg tcgcacaaat tcataagttt tgcatcgaac agggatttga accgacgggg 1620 cgacagtaca tgagagctag ggccaacctc tttgagttgg ttggtttaag gaatctgtac 1680 atggagcact taaagaagac agcagcgaag gcttgtaatt tcacaaagga tcggattcgt 1740 aggaaactgt tcctaacgag taaccacaaa ccttcagttg atttcttggt cgggatagtc 1800 tctggtgttc cgggttgtgg aaagtctaca ctagtgcgta aactactcga ttcacccatt 1860 tcatgctatg tagcacttgc aaatccagcc accgagcgtg attaccgagg gacatctaat 1920 gtgatgaccc tggatgatct acttctagct aaagtaccta tgagttcgga tcttttgatc 1980 gtcgacgagt atacactcgc cgaaagcgct gaaattctct tgctgcaacg cagagtaaga 2040 tcttcactag ttctactagt gggtgacgtc gctcaaggga ggagtaacaa tgcttcgaac 2100 atagagtact tgacactacc agtgatctac agaaaaatca cttcgcatcg aattggcgag 2160 gaaacagcga aagcgtgctc taagcaagga aatcggatta gatccgcggg tcgaaaagat 2220 aagttgatac tagttgacta tgaaggcgaa acggaagaga cagagaaaaa tctggctttt 2280 acggaagaaa ctagagatga cgtcaaagac tgcggttatg actgttctct ggtctctgaa 2340 gtgcaaggtt tagaatatga atctgtcact ttgttcttgc gaaacacgga cagagctgcg 2400 gcgtctgatc accacaaaag gacagtctct atgacaagac ataaaagttt actaatcatc 2460 agggccgaac aagaaattgg tcagccattt ctgatgggtg aattgagtgt gtctagtaag 2520 cgaccgtcaa acgcacacgt gtactcttct gagtgacgat gcctgcaaaa acgacttctg 2580 tggggagtag acctaataag tattggccaa ttgtagctgg tataggtgta gtaggtttat 2640 ttgcttactt aatttttgct aatcagaaac attctactga gtctggagat aatatccaca 2700 aatttgccaa cggtgggagt tatcgagacg gttctaagtg tatttcttac catcgaaaca 2760 accctttcgc ctatggcaat gcctcatctc ctgggatgct cttgcccact ctgttcacaa 2820 tcatcggaat cgtttcctat ctatgggcca ccagaggaga gattatggga ggaaactccc 2880 ccctcctcgg ccacaattgt ggagaggaat gcgccggaga atgtgttcgt ggcttggatc 2940 gacaggaatt acctcctaat tctgtgtagt ctggctttgc ttagtgtgag tttagcttat 3000 atatatttta cttctgggaa taataaccca tatgtaaaag gagggtattt ttaccaagat 3060 cttaactccg tggaggtgcg atttggtgaa caccctgtag acccgaaggt tatagcgtcc 3120 attcaccatt ggcagaagaa cccttttggg gtttctccgc tatgggaggg attaaataat 3180 ctagtgtcta gtttagtgag tgctcttaag ttttatgtag gtttattatt cttactatta 3240 ctaatcataa tctttaagta attttctttc aaaaatcaca aaaagaaaac ttctctaagg 3300 tgaaattcct tagtaaaaac aacaaaaaga aaagtgctgg tgtgaaattc accagagatt 3360 gccactgtgg aaatcagtga cggttttatc taccataaga taaagtgttt tcatgtccac 3420 ttaaatcgaa catgaacaaa tgccttacac cgaaactaca gagatcttac agtctcgtag 3480 agtgaagtgt tgggaattgg tatgtaagct acttcttcca gtagctgcgt cataacatca 3540 aggttatgca tactgagccg aagctcagct tcggtcctcc aaggaagacc a 3591 //