ID M74216; SV 1; linear; genomic DNA; STD; VRL; 3290 BP. XX AC M74216; XX DT 10-FEB-1992 (Rel. 30, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 5) XX DE Porcine rotavirus group C minor internal core protein (VP1) gene (segment DE 1), complete cds. XX KW core protein; RNA polymerase. XX OS Porcine rotavirus C OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus. XX RN [1] RC Erratum:[Virology 1992 Jul;189(1):402]] RP 1-3290 RX DOI; 10.1016/0042-6822(92)90035-N. RX PUBMED; 1310192. RA Bremont M., Juste-Lesage P., Chabanne-Vautherot D., Charpilienne A., RA Cohen J.; RT "Sequences of the four larger proteins of a porcine group C rotavirus and RT comparison with the equivalent group A rotavirus proteins"; RL Virology 186(2):684-692(1992). XX DR MD5; e963c62721bfaac261b98f7f5f0a777a. DR EuropePMC; PMC2687386; 19357162. XX FH Key Location/Qualifiers FH FT source 1..3290 FT /organism="Porcine rotavirus C" FT /mol_type="genomic DNA" FT /db_xref="taxon:10968" FT CDS 17..3265 FT /codon_start=1 FT /gene="VP1" FT /product="minor internal core protein" FT /db_xref="GOA:P26190" FT /db_xref="InterPro:IPR001795" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR022071" FT /db_xref="InterPro:IPR042032" FT /db_xref="UniProtKB/Swiss-Prot:P26190" FT /protein_id="AAB00801.1" FT /translation="MDYDTLASKYLKFVYDFEDVTYQNNYFVTDEYKSDLEQYLKSIHD FT GEKISQSKIDSMETALLTKVPKEKRCLISKLVFAYGKHGNVENKLLKYGTKDALTHAIQ FT KDVKPYENNIITSEIFKDESEYTDTYMDPAINTSCQSNCQAMMFTISEMKLTDIKNATR FT LEKLFTIVAATINKYGMPRHNIRYRYEWETMKDKPYHLAAWINSSIEMIACVVDHHTYM FT IARELIVKSFTNRTSLAKLVSSPMTVLTAMLPIRGTVITTENLELEYSSKSVNYLISEE FT MAEDFMKAIEQLRDEGLEIYQDYYEKWFKSPDPLTFPNIALIYSFSFHVGYRKQALSDA FT VYDQITVTYDDNVNMEMYKEYSERIENEIFTILKDKVVHEDKRLEEYELSALLSMSSAS FT NGVLREIDFGGQKVRSTKKNMHVIDDMYHKRYTTDIPPVDERNPIPLGRRDVPGRRTRA FT IFILPYQYFIAQHSFAEMMLKYAKREREYSEFYSQANQVLSYGDVTRYLDSNSILCFTD FT VSQWDASQHNTRVLRRSIIRAMERLKQLTHNTNIHKAIDIYIQSQKNLENSYVLIDKKA FT IQYGATASGEKQTKIMNSIANKALIQTVLGKLMTDYTFDVKMIRVDGDDNYAIVRFPTA FT ITEKLLSEFTSKLRSYYSEMNVKVKALASLTGCEIAKRYIAGGMLFFRAGVNILNHEKR FT NQDSAYDMAATLYANYIVNALRGLTMSRTFILVKICQMTSIKITGTLRLFPMKSILALN FT STFKVFDEVDYVINYPISELFIQLQRKLSSIKAKSKIADNIAKSPQFKSYVEFLNKSLT FT ADENPIVSDGIKLTEKAKLNSYAPIALEKRRDQFNMMVSFLQNPTTFKSETVVTINDVL FT YFISGFIKINSSVALPKEENNTMPLLPVTIKRTLNYFGLRTHDYDIKGSSSTMSKIIKQ FT YSVYTPGIEELYEVVNKSIDSIRGYFASFNVPKADVDTYISTQMYKHDRFKILQAYIYN FT LLSVNYGMYQLVDLNSAKFFDHVIHTPMAKTPTAVFMIDLALRLKVINHCIEKGEVITV FT SVHANKTDYLKLWRMLWNVKTMNSPYSKNSMFDE" XX SQ Sequence 3290 BP; 1255 A; 493 C; 574 G; 968 T; 0 other; gcagtccaca gtcgtgatgg actacgacac tcttgctagc aaatacctta aatttgttta 60 tgattttgaa gatgtaacat atcaaaataa ttacttcgtc acagatgaat acaaatcaga 120 tttagaacaa tatcttaaat caatacatga tggagagaag atatcgcaat ctaaaattga 180 ttcaatggaa acagctttgt tgactaaggt accaaaagaa aaaagatgct tgatttctaa 240 attagttttt gcatatggaa agcatggaaa tgtggagaat aaactattaa aatatggtac 300 aaaggatgcg ttaacacatg ctatccagaa agatgttaag ccttacgaga ataacataat 360 tacatctgaa atttttaaag atgaatctga atatactgat acatatatgg atccagcgat 420 taacacttca tgccaatcaa attgtcaggc catgatgttc acgatctctg aaatgaagtt 480 aactgatatt aagaatgcaa caagactaga aaaattattt acaattgtag ctgctactat 540 taataaatac ggtatgccta gacataacat tcgatacaga tacgaatggg aaactatgaa 600 agataaacca tatcatttag cagcatggat aaattcgagc attgagatga ttgcatgcgt 660 tgttgaccat catacctata tgattgctag agaactaatt gtaaaatcat ttacaaatag 720 aacatcatta gcgaaattgg tatcatcacc gatgacagta ttaacggcca tgctgccaat 780 acgaggcaca gtcataacta cagagaattt agaattagaa tattctagca agtcagttaa 840 ttatttaata tcagaagaaa tggctgaaga tttcatgaaa gctattgaac agttaagaga 900 tgaaggtttg gagatatacc aagattatta tgaaaaatgg tttaaatcac ctgatccttt 960 aacctttcct aatatagccc taatatattc atttagtttt catgtcggtt acagaaaaca 1020 agctttatcg gatgcggtat atgaccaaat tactgtaaca tatgatgata atgttaatat 1080 ggaaatgtat aaagagtatt ctgaacgtat tgagaatgaa atattcacaa ttttaaaaga 1140 taaagtagtt catgaagaca aaagattaga agaatatgaa ctatcagcgt tactttctat 1200 gtcatcagca tcaaatggag tattgcgaga aatagatttt ggaggacaga aggttagatc 1260 aacaaagaag aacatgcatg taattgatga tatgtaccat aagcgatata caacggatat 1320 accgccagtg gatgaaagaa atccaatccc attaggaaga agggatgttc caggaagaag 1380 gacaagagca atttttatat tgccatatca atattttatt gcacagcatt cttttgctga 1440 gatgatgctt aaatatgcaa aacgtgaacg agaatattca gaattctatt ctcaggcaaa 1500 ccaagtatta tcatatggtg atgtcacgcg ttatcttgat tcaaatagta tactatgctt 1560 cactgatgta tcacaatggg atgcttctca acataatact agagttctac gaagatcaat 1620 aataagagca atggaaagac taaagcagtt gacacataat actaatatac acaaagctat 1680 agacatatac atacagtcac aaaagaattt agaaaattca tatgtgttaa tagataaaaa 1740 agccattcag tatggtgcaa cagcatcagg tgaaaagcaa actaaaatca tgaattcgat 1800 agccaataaa gctctgatac agacagttct tggaaaactc atgacagatt acacctttga 1860 cgttaaaatg atacgagttg atggagatga caattatgcc attgtgaggt ttccaactgc 1920 tataactgaa aaattattat cggaattcac atcgaaattg agatcatatt attctgaaat 1980 gaatgtgaaa gtcaaagcac tagcatcact tacaggatgt gaaatagcaa aaagatacat 2040 agctggtgga atgttattct tcagagctgg agtgaacata ttgaatcatg agaagagaaa 2100 ccaggattca gcatatgata tggcagctac attatatgca aattatatag ttaatgctct 2160 aagaggactt actatgtcta gaactttcat attagttaag atatgccaaa tgacatcaat 2220 caaaattact ggtacattga gactatttcc aatgaagtca atactagcat taaattcaac 2280 gtttaaagta tttgatgaag tagactatgt tattaattac ccaatatcag aattgttcat 2340 acaactacag cgtaaattga gctcaattaa agcgaaatct aaaattgctg ataacatcgc 2400 gaagtcacca cagttcaaat catatgttga atttcttaat aaatcactta ctgctgatga 2460 gaatccgatt gtttcagatg gaattaaatt aaccgaaaaa gctaaactta atagttatgc 2520 accgatagca ctggaaaaaa gacgagatca atttaacatg atggtgtcat tcttacaaaa 2580 tccaactact tttaagagcg aaactgtagt tacaataaat gatgtactct attttatttc 2640 agggtttatt aaaatcaatt cttctgtagc actaccgaaa gaagaaaaca atacgatgcc 2700 actactacct gtaactatta aacgtacgtt aaactatttt ggactgagaa cacatgacta 2760 tgatataaag gggtcatcat caaccatgtc aaaaataatt aaacaatatt cagtgtatac 2820 tcctggaatt gaagaattat acgaagtagt taataaaagt atagatagta tacgaggtta 2880 ttttgcatca ttcaatgtac caaaggctga tgtggatact tatattagta cacagatgta 2940 taagcatgac agatttaaga tactacaagc ttatatttac aatttactat cagttaatta 3000 tggaatgtat cagttagtag atctcaattc agcaaagttt ttcgatcatg tcatccatac 3060 accaatggcc aaaacaccaa ctgctgtctt catgatagat ttggcattga gattgaaagt 3120 gataaatcat tgtattgaaa aaggtgaagt aattaccgtg tcagtacatg ctaacaagac 3180 tgattattta aaactgtggc gtatgttgtg gaacgttaaa acgatgaatt caccatattc 3240 aaagaattca atgttcgatg agtaagagag atggactgca tattgtggct 3290 //