ID M65139; SV 1; linear; mRNA; STD; VRL; 3171 BP. XX AC M65139; XX DT 01-AUG-1991 (Rel. 28, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 5) XX DE Cowpea chlorotic mottle virus (CCMV) 1a protein gene, complete cds. XX KW 1a protein; 3A gene; coat protein. XX OS Cowpea chlorotic mottle virus OC Viruses; Riboviria; Bromoviridae; Bromovirus. XX RN [1] RP 1-3171 RX DOI; 10.1016/0042-6822(91)90525-G. RX PUBMED; 1962437. RA Dzianott A.M., Bujarski J.J.; RT "The nucleotide sequence and genome organization of the RNA-1 segment in RT two bromoviruses: broad bean mottle virus and cowpea chlorotic mottle RT virus"; RL Virology 185(2):553-562(1991). XX DR MD5; 6e728655d997531cc3741173a0a40735. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3171 FT /organism="Cowpea chlorotic mottle virus" FT /mol_type="mRNA" FT /db_xref="taxon:12303" FT CDS 71..2947 FT /codon_start=1 FT /product="1a protein" FT /db_xref="GOA:P27752" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:P27752" FT /protein_id="AAA46369.1" FT /translation="MASSLDLLKLISERGADSRGASDIVEQQAVKQLLEQVDYSKRSKK FT INIRNKLTPDEENAFRARYGGAFDLNLTQQYNAPHSLAGALRIAEHYDCLSSFPPLDPI FT IDFGGSWWHHYSRKDTRIHSCCPVLGVRDAARHEERLCRMRKLLQECDDREDLPDFCID FT RAESCSVQADWAICIHGGYDMGYTGLCEAMHSHGVRILRGTIMFDGAMLFDNEGVLPLL FT KCRWMKSGKGKSEVIKFDFMNESTLSYIHSWTNLGSFLTESVHVIGGTTYLLERELLKC FT NIMTYKIVATNLKCPKETLRHCVWFENISQYVAVNIPEDWNLTHWKPVRVAKTTVREVE FT EIAFRCFKENKEWTENMKAIASILSAKSSTVIINGQAIMAGERLNIDEYHLVAFALTMN FT LYQKYENIRNFYSEMEWKGWVNHFKTRFWWGGSTATSSTGKIREFLAGKFPWLRLDSYK FT DSFVFLSKISDVKEFENDSVPISRLRSFFSSEDLMERIELELESAQKRRREKKKKEVEK FT IDEEEFQDAIDIPNDAVRDDAKPEKEPKPEVTVGAEPTGPEEASRHFAIKEFSDYCRRL FT DCNAVSNLRRLWAIAGCDGRTARNKSILETYHRVDDMINLHYPGGQWLYPKKYDYEVGF FT NDSGLGPKFDDELYVVDKSCICANYQVLSKNTDSLKAPSCKISLCDGVAGCGKTTAIKS FT ASNIAEHLVVTANKKSAEDVREALFPHNPSSEIAFKVIRTADSALMHGLPRCKRLLVDE FT AGLLHYGQLLAVAALCKCQSVLAFGDTEQISFKSRDATFRLKYGDLQFDSRDIVTETWR FT CPQDVISAVQTLKRGGNRTSKYLGWKSHSKVSRSISHKEIASPLQVTLSREKFYLTMTQ FT ADKAALVSRAKDFPELDKAWIEKHIKTVHEAQGVSVDHAVLVRLKSTKCDLFKTEEYCL FT VALTRHKITFEYLYVGMLSGDLIFRSIS" XX SQ Sequence 3171 BP; 878 A; 604 C; 776 G; 913 T; 0 other; gtaatccacg agaacgaggt tcaatccctt gtcgactcac ggagtatcga acttttctta 60 attttattta atggcaagtt ctttagatct tttgaaattg atttctgaga gaggcgctga 120 cagccgaggc gcttcggaca tagttgaaca acaagctgta aagcaattgc ttgagcaagt 180 tgactactcg aaaaggtcca agaaaatcaa tattagaaat aaactcacgc ccgatgaaga 240 gaatgctttc cgggcgcgct atggaggagc ttttgatttg aacttaactc aacaatataa 300 tgctccccat agtttggctg gagctctgcg aatagcggag cattatgact gtctttcaag 360 cttcccccct cttgatccca tcattgattt tggtggttct tggtggcatc attattccag 420 gaaggacaca cgtattcaca gttgttgtcc cgtgttgggc gtcagagatg ctgctcgaca 480 tgaagaacga ctatgtagaa tgcgtaagtt gttacaagag tgtgacgaca gagaagatct 540 accagatttc tgtattgata gagctgaatc ctgcagtgtc caggctgatt gggccatatg 600 tattcatggt ggttatgaca tgggttacac aggtctatgt gaagctatgc attcccacgg 660 ggtgcgtatt ttgcggggta ctattatgtt cgacggtgct atgttgtttg acaacgaagg 720 cgttttacct ttgttgaagt gccgttggat gaagtctggg aaaggtaaat ctgaggtcat 780 taaatttgat ttcatgaatg agagcacact ttcttatatt cattcttgga ccaatcttgg 840 ttcatttttg actgagtctg tgcatgtgat aggaggtact acttatctcc tagaacgtga 900 gctcttaaaa tgcaatatta tgacctataa aatcgttgcc acaaatctga agtgtcctaa 960 ggaaacgttg cgacattgtg tttggtttga gaatatttcc caatatgtcg ccgttaacat 1020 tcctgaagac tggaatctga ctcattggaa acccgtacgt gtggcaaaaa ccaccgtaag 1080 agaggttgaa gagattgctt ttcgatgttt taaggagaat aaagagtgga cggagaatat 1140 gaaagcgata gcatctattc tgtccgctaa atcttctaca gtcattatca acggtcaagc 1200 tatcatggcc ggagagaggc tgaacattga tgagtatcat ctcgtcgcct ttgctctcac 1260 tatgaatttg tatcagaaat atgaaaatat tcggaatttt tatagtgaga tggaatggaa 1320 gggctgggtc aaccacttta aaactagatt ttggtgggga ggaagtacgg ctacctcaag 1380 cactggtaag attcgagagt ttctggctgg taaattccct tggctgaggt tagattcgta 1440 caaagacagt tttgtttttc tgtcgaagat ctctgatgtc aaagagtttg agaacgattc 1500 tgttcccatc tccagactga ggagtttctt cagcagtgag gacctcatgg agcgcattga 1560 attagagctt gaatctgcgc aaaagcgtcg tcgggaaaag aaaaagaaag aggtcgaaaa 1620 aatcgatgag gaggaatttc aagatgccat cgatatcccg aatgatgccg tcagagatga 1680 cgctaaacct gaaaaggagc ctaaaccgga agtgaccgtt ggagctgaac caacaggccc 1740 cgaagaggca tcgagacact ttgccatcaa ggaattctct gattattgtc gtcgccttga 1800 ctgtaacgct gtgtcaaatc ttcgtcgttt atgggccatt gctggctgcg atgggaggac 1860 tgcgagaaat aagtcgatcc ttgaaactta tcatagggtt gacgatatga tcaatttgca 1920 ctatcctggg ggtcaatggt tgtaccccaa gaaatacgac tatgaagtgg gtttcaatga 1980 ctcgggctta ggtccgaagt ttgatgatga gctttatgtc gttgacaaat catgtatatg 2040 tgcgaattat caggtgctga gcaaaaatac agatagctta aaagcacctt cttgcaaaat 2100 ctcgttgtgt gacggagttg ctggatgcgg gaagaccaca gcaattaaat ccgcgtccaa 2160 catagctgag cacctagtgg taactgctaa caagaagtcc gctgaagacg tcagggaggc 2220 tctattccct cataatccat cgtctgagat agcgttcaag gttataagga cggcagactc 2280 tgctttaatg catggtttac cgcgatgtaa gcgcttattg gtcgatgaag ctgggctact 2340 acactatggt cagctgctcg ctgtggctgc tctctgtaag tgtcagtctg ttcttgcatt 2400 cggagacacg gagcaaattt cttttaaatc gcgagatgca actttccgcc tgaaatatgg 2460 tgatttgcag tttgacagtc gcgatattgt tacggagaca tggagatgtc cgcaagatgt 2520 tatttccgca gttcagactc tgaaaagagg cgggaacagg acctccaaat atttgggttg 2580 gaaatcccat tctaaagtat ccaggagcat tagtcataaa gaaatagcat cacctttaca 2640 ggtgacgctt tcaagggaaa aattctattt gacaatgact caggctgata aagccgccct 2700 tgtttccagg gctaaggatt tcccagagct tgataaggcc tggattgaga aacatataaa 2760 aaccgttcat gaggctcaag gtgtgtcagt agatcacgct gtattggtaa gacttaaatc 2820 taccaagtgt gatctattta aaactgaaga atattgcttg gtggctttga ctcgacataa 2880 gattaccttt gagtatcttt atgttggtat gctatcaggt gatttaatat ttagaagtat 2940 atcttgatcc tgagtgtgat tcacttacga atcagttcta acggtttcta taaaccgtag 3000 tcgtcgttgc gacgccgacc gtcttacaag acgttcgagc tgcctttggg ttttactcct 3060 tgaacccttc agaagaattc ttcggagttc gtaccagtat ctcacatagt gaggtgataa 3120 gactggtggg cagtgcctag tcgaaagact aggtgatctc taaggagacc a 3171 //