ID   M28818; SV 1; linear; genomic RNA; STD; VRL; 2173 BP.
XX
AC   M28818;
XX
DT   02-FEB-1990 (Rel. 22, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   Cowpea chlorotic mottle virus RNA3, encoding 3a protein and coat protein,
DE   complete cds.
XX
KW   .
XX
OS   Cowpea chlorotic mottle virus
OC   Viruses; Riboviria; Bromoviridae; Bromovirus.
XX
RN   [1]
RP   1-2173
RX   DOI; 10.1016/0042-6822(89)90134-7.
RX   PUBMED; 2773323.
RA   Allison R.F., Janda M., Ahlquist P.G.;
RT   "Sequence of cowpea chlorotic mottle virus RNAs 2 and 3 and evidence of a
RT   recombination event during bromovirus evolution";
RL   Virology 172(1):321-330(1989).
XX
DR   MD5; 6e8a3f789345275fd6ffdde167b56b6c.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2173
FT                   /organism="Cowpea chlorotic mottle virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12303"
FT   CDS             239..1147
FT                   /codon_start=1
FT                   /note="3a protein"
FT                   /db_xref="GOA:P20180"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/Swiss-Prot:P20180"
FT                   /protein_id="AAA46372.1"
FT                   /translation="MSNTTFRPFTGSSRTVVEGEQAGAQDDMSLLQSLFSDKSREEFAK
FT                   ECKLGMYTNLSSNNRLNYIDLVPKNTGSRALNLFKSEYEKGHIPSSGVLSIPRVLVFLV
FT                   RTTTVTESGSVTIRLVDLISASSVEILEPVDGTQEATIPISSLPAIVCFSPSYDCPMQM
FT                   IGNRHRCFGLVTQLDGVISSGSTVVMSHAYWSANFRSKPNNYKQYAPMYKYVEPFDRLK
FT                   RLSRKQLKNYVRGITNQSVNHGYLLGKPLLKTDEQDPEMIVLEEESLTPTDSNGVGKDK
FT                   IAVTAKSVAGLPTASLSINRR"
FT   CDS             1360..1932
FT                   /codon_start=1
FT                   /note="coat protein"
FT                   /db_xref="GOA:P03601"
FT                   /db_xref="InterPro:IPR002009"
FT                   /db_xref="PDB:1CWP"
FT                   /db_xref="PDB:1ZA7"
FT                   /db_xref="UniProtKB/Swiss-Prot:P03601"
FT                   /protein_id="AAA46373.1"
FT                   /translation="MSTVGTGKLTRAQRRAAARKNKRNTRVVQPVIVEPIASGQGKAIK
FT                   AWTGYSVSKWTASCAAAEAKVTSAITISLPNELSSERNKQLKVGRVLLWLGLLPSVSGT
FT                   VKSCVTETQTTAAASFQVALAVADNSKDVVAAMYPEAFKGITLEQLTADLTIYLYSSAA
FT                   LTEGDVIVHLEVEHVRPTFDDSFTPVY"
XX
SQ   Sequence 2173 BP; 598 A; 453 C; 524 G; 598 T; 0 other;
     gtaatcttta ccaaacaact ttcaaacttt atagtttatg tagttgctgt gattcccgtg        60
     agcagcgttt agattactga cttggacaca tcggtttttg aagcatcgga tagaggtgat       120
     taacgctaaa ccgtaccata gtaggctgtt acctgactcg aactcaggcg gacgtcagct       180
     gacattcacg gaatagttcg atatcataat tcctcgttct ttgctgttat agctcccgat       240
     gtctaacact acttttagac cttttactgg ttcctccagg accgtggtcg agggagaaca       300
     agccggcgcc caggatgata tgtcgttgtt acagtcactt ttttccgaca aatccaggga       360
     ggagtttgct aaggagtgta agttgggtat gtataccaat ttatcctcta ataaccggct       420
     taattatata gatctagtcc ccaagaacac tggtagtaga gctctgaact tatttaagtc       480
     agagtatgaa aaaggtcaca ttccctccag cggtgtgctt agtataccta gagtgctggt       540
     ttttcttgtg aggacgacaa cagtgactga atctgggagt gtcaccatta gattggttga       600
     cttgataagc gcttcgtcgg ttgagatttt agaacctgtg gatggtacgc aagaggctac       660
     tattcctatt tctagtcttc cggctatcgt ttgtttttct cctagttatg actgtcccat       720
     gcagatgata gggaatagac acagatgttt cggtttggta actcaactgg atggtgtcat       780
     atcctcaggg tctaccgtcg ttatgagtca tgcgtattgg tctgcgaact ttcgtagtaa       840
     acctaataac tacaagcagt acgcacctat gtataagtat gtggaaccct ttgacaggtt       900
     gaaacgtttg agccgtaaac aattgaaaaa ttatgttagg ggcataacga atcaatctgt       960
     aaatcatggt tatctattgg gtaaaccact actgaagact gacgagcaag atccagagat      1020
     gattgtgtta gaggaggaat cactaacccc taccgacagc aacggagtcg gcaaggataa      1080
     aatcgccgta accgctaaat ccgttgcggg gcttccgacg gcctcgttgt ctatcaatcg      1140
     tagatagcta gatctattgc taacagactt agtgtcatgg gagcaaaact catatgaggt      1200
     cagtgaaaca tgaattggga agaatcagaa cccgccgaaa ggacaggctg agggcgtacg      1260
     attcatgtgt agctggctgg gtgtgagaca caaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1320
     aaaaaaaaaa atctatgttt aatttgatag taatttatca tgtctacagt cggaacaggg      1380
     aagttaactc gtgcacaacg aagggctgcg gcccgtaaga acaagcggaa cactcgtgtg      1440
     gtccaacctg ttattgtaga acccatcgct tcaggccaag gcaaggctat taaagcatgg      1500
     accggttaca gcgtatcgaa gtggaccgcc tcttgtgcgg ctgccgaagc taaagtaacc      1560
     tcggctataa ctatctctct ccctaatgag ctatcgtccg aaaggaacaa gcagctcaag      1620
     gtaggtagag ttttattatg gcttgggttg cttcccagtg ttagtggcac agtgaaatcc      1680
     tgtgttacag agacgcagac tactgctgct gcctcctttc aggtggcatt agctgtggcc      1740
     gacaactcga aagatgttgt cgctgctatg taccccgagg cgtttaaggg tataaccctt      1800
     gaacaactca ccgcggattt aacgatctac ttgtacagca gtgcggctct cactgagggc      1860
     gacgtcatcg tgcatttgga ggttgagcat gtcagaccta cgtttgacga ctctttcact      1920
     ccggtgtatt agtgcccgct gaagagcgtt acactagtgt ggcctacttg aaggctagtt      1980
     ataaccgttt ctttaaacgg taatcgttgt tgaaacgtct tccttttaca agaggattga      2040
     gctgcccttg ggttttactc cttgaaccct tcggaagaac tctttggagt tcgtaccagt      2100
     acctcacata gtgaggtaat aagactggtg ggcagcgcct agtcgaaaga ctaggtgatc      2160
     tctaaggaga cca                                                         2173
//