ID M24597; SV 2; circular; genomic DNA; STD; VRL; 2993 BP. XX AC M24597; X04144; XX DT 01-OCT-1996 (Rel. 49, Created) DT 19-MAR-2010 (Rel. 104, Last updated, Version 7) XX DE Beet curly top virus - California [Logan], complete genome. XX KW . XX OS Beet curly top virus - California [Logan] OC Viruses; Geminiviridae; Curtovirus. XX RN [1] RP 1-2993 RX PUBMED; 16453696. RA Stanley J., Markham P.G., Callis R.J., Pinner M.S.; RT "The nucleotide sequence of an infectious clone of the geminivirus beet RT curly top virus"; RL EMBO J. 5(8):1761-1767(1986). XX RN [2] RC Sequence updated by submitter RP 1-2993 RA Stanley J.; RT ; RL Submitted (17-MAR-2010) to the INSDC. RL Department of Disease and Stress Biology, John Innes Centre, Colney Lane, RL Norwich NR4 7UH, UK XX DR MD5; 7dc308371e0ade88c091b63b08c3bdc6. DR EuropePMC; PMC2816314; 20104645. DR EuropePMC; PMC2902183; 17532021. DR EuropePMC; PMC3818925; 19198754. DR EuropePMC; PMC5904752; 29530481. XX CC On Mar 17, 2010 this sequence version replaced gi:210678. CC Data kindly reviewed (12-SEP-1986) by M. Pinner CC From EMBL entry GEBCTV; dated 06-JUL-1989. XX FH Key Location/Qualifiers FH FT source 1..2993 FT /organism="Beet curly top virus - California [Logan]" FT /mol_type="genomic DNA" FT /clone="pBCT028" FT /db_xref="taxon:268960" FT CDS 299..565 FT /codon_start=1 FT /product="ORFV3" FT /db_xref="GOA:Q91J29" FT /db_xref="InterPro:IPR009997" FT /db_xref="UniProtKB/Swiss-Prot:Q91J29" FT /protein_id="ADD82465.1" FT /translation="MMVCLPDWLFLLFIFSILLQSGTNFYGTFQSGSISRQLSSLSSSI FT DQLFLKVQQVVYTRYPSRDRVSDPRRRRGLSSIPEGSEEATEV" FT CDS 375..683 FT /codon_start=1 FT /product="ORFV2" FT /db_xref="InterPro:IPR009931" FT /db_xref="UniProtKB/Swiss-Prot:Q77HP2" FT /protein_id="AAA42752.1" FT /translation="MGPFRVDQFPDNYPAFLAVSTSCFLRYNRWCILGIHQEIGSLTLE FT EGEVFRQFQKEVKKLLRCKVNFHRKCSLYEEIYKKYVYNVPEKKGESSKCVAEEEED" FT CDS 595..1359 FT /codon_start=1 FT /product="ORFVI" FT /db_xref="GOA:P14984" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/Swiss-Prot:P14984" FT /protein_id="AAA42753.1" FT /translation="MRKYTRNTYTMSQKRKVNPQSAWPKKRRTSTTSRKYQWRRPVTKN FT RTLKLKMYDDMLGAGGIGSTISNNGMITMLNNYVQGIGDSQRAKNVTVTKHLKFDMALM FT GSSQFWETPNYMTQYHWIIIDKDVGSVFPTKLSSIFDIPDNGQAMPSTYRIRRDMNERF FT IGKKKWRTHWMSTGTGYGGKETYKAPSMPNYKKPMNINVRNLNMRTIWKDTGGGKYEDV FT KENALLYVVVNDNTDNTNMYATLFGNCRCYFY" FT CDS complement(1384..1794) FT /codon_start=1 FT /product="ORFC3" FT /db_xref="GOA:P14994" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/Swiss-Prot:P14994" FT /protein_id="AAA42754.1" FT /translation="MNVIEDFRTGEPITLHQATNSVEFENVPNPLYMKLLWFERYGPIY FT QLKIQIRFNYNLRRALNLHKCWIELTITGSNRILTGPRFLKVLKKRLEIYLDNLGLICI FT NNVIRGLNHVLYEEFTFVSSVIQNQSVAMNLY" FT CDS complement(1502..2023) FT /codon_start=1 FT /product="ORFC2" FT /db_xref="GOA:Q91J26" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/Swiss-Prot:Q91J26" FT /protein_id="AAA42755.1" FT /translation="MENHVSLKVVSPALYYAIQDLRAHTNNFLKNQKMKPLSPGHYIIQ FT PSANSKVRSLITKQQHPRKVTLPCNCHFTIHHECNRGFSHRGTYYSPSGNKFRRIRECT FT ESTVYETPMVREIRANLSTEDTNQIQLQPPESVESSQVLDRADDNWIEQDIDWTPFLEG FT LEKETRDILG" FT CDS complement(1815..2891) FT /codon_start=1 FT /product="ORFC1" FT /db_xref="GOA:P14991" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/Swiss-Prot:P14991" FT /protein_id="AAA42751.2" FT /translation="MPPTKRFRIQAKNIFLTYPQCSLSKEEALEQIQRIQLSSNKKYIK FT IARELHEDGQPHLHVLLQLEGKVQITNIRLFDLVSPTRSAHFHPNIQRAKSSSDVKSYV FT DKDGDTIEWGEFQIDGRSARGGQQTANDSYAKALNATSLDQALQILKEEQPKDYFLQHH FT NLLNNAQKIFQRPPDPWTPLFPLSSFTNVPEEMQEWADAYFGVDAAARPLRYNSIIVEG FT DSRTGKTMWARSLGAHNYITGHLDFSPRTYYDEVEYNVIDDVDPTYLKMKHWKHLIGAQ FT KEWQTNLKYGKPRVIKGGIPCIILCNPGPESSYQQFLEKPENEALKSWTLHNSTFCKLQ FT GPLFNNQAAASSQGDSTL" FT CDS complement(2477..2734) FT /codon_start=1 FT /product="ORFC4" FT /db_xref="GOA:Q91J24" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/Swiss-Prot:Q91J24" FT /protein_id="ADD82466.1" FT /translation="MGNLISTSCFNSKEKFRSQISDYSTWYPQPGQHISIQTFRELNPA FT PTSSPTSTRTETQLNGENSRSTVEVLEEVNRQLTTHMPRR" XX SQ Sequence 2993 BP; 854 A; 505 C; 675 G; 959 T; 0 other; accggatggc ccgaaaaaaa tgggcaccca atcaaaacgt gacacgtgga aggggactgt 60 tgaatgatgt gacgtttttg agcgggaaac ttcctgaaga agattcctgc gggaaacttc 120 ctgaagaaga ttcctttcag ataagatttg ttgactggtc aaaagaaggg gacaacttta 180 ttaaagtaac tttactttag taaaagtaaa gtaagtgtgc cccacaggaa acttgctcag 240 caagttttga attatgtcgt tttatatacg ttatttttac atgtatatgt aattataaat 300 gatggtctgt ctaccagact ggttattttt gctatttatc ttcagtattc tactgcaatc 360 aggtacgaac ttttatggga cctttcagag tggatcaatt tccagacaat tatccagcct 420 ttctagcagt atcgaccagt tgtttcttaa ggtacaacag gtggtgtata ctaggtatcc 480 atcaagagat agggtctctg accctagaag aaggcgaggt ctttcgtcaa ttccagaagg 540 aagtgaagaa gctactgagg tgtaaggtta attttcatag gaagtgttcg ttgtatgagg 600 aaatatacaa gaaatacgta tacaatgtcc cagaaaagaa aggtgaatcc tcaaagtgcg 660 tggccgaaga agaggaggac tagtacgact tcgaggaaat accaatggag gagacctgtg 720 acaaaaaaca ggactctgaa gttaaagatg tatgatgata tgttgggtgc tggtggtata 780 ggatctacca ttagtaataa tggtatgatt actatgttga ataattatgt ccagggtatt 840 ggtgatagtc agagagcgaa gaacgttact gtgacgaagc atttgaagtt tgatatggct 900 cttatgggga gttctcagtt ctgggagact cctaattata tgacccaata tcattggatt 960 atcatagaca aggatgttgg gtcagtgttt cctactaagt tatcgagtat atttgatatt 1020 cccgataacg gtcaggctat gccgtctact tatcgtattc gaagagatat gaacgagagg 1080 tttattggga agaagaaatg gagaactcat tggatgtcta ctggtactgg atatggaggg 1140 aaggagactt acaaggctcc ttcaatgcca aattacaaga aaccgatgaa tatcaatgtg 1200 cgcaatttga acatgaggac tatttggaaa gacaccggtg gtgggaagta tgaagacgtg 1260 aaggagaatg ctttactcta tgttgttgtt aatgataata cggataatac taatatgtat 1320 gccacattat ttggcaattg tagatgctat ttttattaat aatatttatt attaataatg 1380 aaattagtac aagttcattg caacactctg gttctgaatt acacttgata caaaagtaaa 1440 ttcttcatac aggacatgat ttaaacctct aattacatta ttaatacaaa ttaaacctag 1500 attatccaag tatatctcta gtctcttttt caagaccttc aagaaacggg gtccagtcaa 1560 tatcctgttc gatccagtta tcgtcagctc tatccagcac ttgtgaagat tcaacgctct 1620 ccggaggttg tagttgaatc tgatttgtat cttcagttga tagattggcc cgtatctctc 1680 gaaccatagg agtttcatat acagtggatt cggtacattc tcgaattcga cggaatttgt 1740 tgcctgatgg agagtaatag gttcccctgt gcgaaaatcc tctattacat tcatggtgta 1800 ttgtgaagtg gcagttacag ggtagagtca ccttgcgagg atgctgctgc ttggttatta 1860 aagagcggac cttggagttt gcagaaggtt gaattatgta atgtccagga cttaagggct 1920 tcattttctg gtttttcaag aaattgttgg tatgagctct caggtcctgg attgcataat 1980 ataatgcagg ggataccacc tttaatgaca cgtggttttc catactttaa gtttgtctgc 2040 cactcctttt gtgctccaat aaggtgtttc cagtgtttca tctttaagta agtgggatct 2100 acgtcatcaa tgacgttgta ttccacttca tcataatacg ttctagggct aaaatctaag 2160 tgccctgtga tgtaattgtg ggcccctaaa gatctagccc acatagtctt ccctgttctt 2220 gaatcaccct ctactatgat actattatat cttaaaggcc gcgcagcggc atcaaccccg 2280 aaatatgcat cagcccattc ttgcatttcc tcaggaacgt ttgtgaatga ggacagagga 2340 aatagtggag tccatggatc aggtggcctc tgaaatatct tttgagcatt gttcaaaaga 2400 ttgtgatgtt gaaggaagta atcctttggt tgttcttcct tcaatatttg aagtgcttgg 2460 tcaagagaag ttgcgtttaa cgccttggca tatgagtcgt tagctgtctg ttgacctcct 2520 ctagcacttc taccgtcgat ctggaattct ccccattcaa ttgtgtctcc gtccttgtcg 2580 acgtaggact tgacgtcgga gctggattta gctctctgaa tgtttggatg gaaatgtgct 2640 gacctggttg gggataccag gtcgaataat ctgatatttg tgatctgaac ttttccttcg 2700 agttgaagca ggacgtggag atgaggttgc ccatcttcgt gtagctctct ggcaatttta 2760 atatattttt tattagatga aagttgtatt ctttgaattt gctcaagagc ttcttctttt 2820 gaaagagaac actgaggata tgtaagaaat atgttttttg cttgaatacg aaatctttta 2880 gtaggaggca ttgtactccg atgacgtggc ttagcatatt aacatatcta ttggagtatt 2940 ggagtattat atatattagt acaactttca taagggccat ccgttataat att 2993 //