ID M20304; SV 1; linear; genomic RNA; STD; VRL; 3432 BP. XX AC M20304; M65834; XX DT 20-FEB-1989 (Rel. 18, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 5) XX DE Tacaribe virus glycoprotein and nucleoprotein mRNAs, complete cds. XX KW glycoprotein; nucleoprotein. XX OS Mammarenavirus tacaribeense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-3432 RX DOI; 10.1016/0168-1702(87)90045-1. RX PUBMED; 3617928. RA Franze-Fernandez M.-T., Zetina C., Iapalucci S., Lucero M.A., Bouissou C., RA Lopez R., Rey O., Daheli M., Cohen G.N., Zakin M.M.; RT "Molecular structure and early events in the replication of Tacaribe RT arenavirus S RNA"; RL Virus Res. 7(4):309-324(1987). XX RN [2] RX DOI; 10.1016/0042-6822(91)90670-7. RX PUBMED; 2024465. RA Iapalucci S., Lopez N., Franze-Fernandez M.T.; RT "The 3' end termini of the Tacaribe arenavirus subgenomic RNAs"; RL Virology 182(1):269-278(1991). XX DR MD5; 849ad97dbc3b50fb937ab4453098a5e9. DR EuropePMC; PMC112216; 10888638. DR EuropePMC; PMC1472124; 16698999. DR EuropePMC; PMC1563716; 16840359. DR EuropePMC; PMC1866146; 17267481. DR EuropePMC; PMC2680969; 19478873. DR EuropePMC; PMC2730321; 12095441. DR EuropePMC; PMC3047505; 12504568. DR EuropePMC; PMC3131282; 21750710. DR EuropePMC; PMC3210867; 21982818. DR EuropePMC; PMC3309595; 22377271. DR EuropePMC; PMC3605688; 23382389. DR EuropePMC; PMC4111098; 24161346. DR EuropePMC; PMC4275251; 25536075. DR EuropePMC; PMC516395; 15367645. DR EuropePMC; PMC5932378; 29720525. XX FH Key Location/Qualifiers FH FT source 1..3432 FT /organism="Mammarenavirus tacaribeense" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052328" FT CDS 52..1539 FT /codon_start=1 FT /note="glycoprotein" FT /db_xref="GOA:P18141" FT /db_xref="InterPro:IPR001535" FT /db_xref="UniProtKB/Swiss-Prot:P18141" FT /func_characterised="identical sequence" FT /protein_id="AAA47902.1" FT /translation="MGQFISFMQEIPIFLQEALNIALVAVSLICIVKGLVNLYRCGLFQ FT LMVFLVLAGRSCSEETFKIGMHTKFQEVSLSLSALLTNQSHELPMLCLANKTHLYLKSG FT RSSFKINIDSVTVLTRSEVNLTSINLTRSIDVFVHSPKLGSCFESDEEWVVAWWIEAIG FT HRWDQDPGLLCRNKTKTEGKLIQINISRADGNVHYGWRLKNGLDHIYRGREEPCFEGEQ FT CLIKIQPEDWPTDCKADHTNTFRFLSRSQKSIAVGRTLKAFFSWSLTDPLGNEAPGGYC FT LEKWMLVASELKCFGNTAIAKCNQNHDSEFCDMLRLFDYNKNAIKTLNEETKTRVNVLS FT HTINALISDNLLMKNKIRELMSVPYCNYTRFWYVNHTLSGQHSLPRCWMIRNNSYLNSS FT EFRNEWILESDFLISEMLGKEYSERQGRTPITLVDICFWSTVFFTSTLFLHLIGFPTHE FT HIRGEGCPLPHRLNSMGGCRCGKYLPLKKPTIWHRRH" FT misc_feature 1576..1579 FT /note="3' end of glycoprotein mRNA" FT misc_feature complement(1585..1587) FT /note="3' end of nucleoprotein mRNA" FT CDS complement(1644..3356) FT /codon_start=1 FT /product="nucleoprotein" FT /db_xref="GOA:P18140" FT /db_xref="InterPro:IPR000229" FT /db_xref="InterPro:IPR035083" FT /db_xref="InterPro:IPR035084" FT /db_xref="InterPro:IPR038115" FT /db_xref="PDB:4GVE" FT /db_xref="UniProtKB/Swiss-Prot:P18140" FT /func_characterised="identical sequence" FT /protein_id="AAA47903.1" FT /translation="MAQSKEVPSFRWTQSLRKGLSQFTQTVKSDILKDAKLIADSIDFN FT QVAQVQRVLRKTKRTDDDLNKLRDLNIEVDRLMSMKSVQKNTIFKVGDLARDELMELAS FT DLEKLKDKIKRTESNGTNAYMGNLPQSQLNRRSEILRTLGFAQQGGRPNGIVRVWDVKD FT SSKLNNQFGSMPALTIACMTVQGGETMNNVVQALTSLGLLYTVKYPNLSDLDKLIPNHE FT CLQIITKEESSINISGYNLSLLAAVKAGASILDGGNMLETIRVSPDNFSSLIKNTLQVK FT RREGMFIDDRPGSRNPYENLLYKLCLSGDGWPYIGSRSQIMGRSWDNTSVDLTKKPDAV FT PEPGAAPRPAERKGQNLRLASLTEGQELIVRAAISELDPSNTIWLDIEDLQLDPVELAL FT YQPAKKQYIHCFRKPHDEKGFKNGSRHSHGILMKDIEDAVPGVLSYVIGLLPPNMVITT FT QGSDDIRKLLDIHGRKDLKLIDVKFTSDQARLFEHQVWDKFGHLCKQHNGVIISKKNKS FT KDSPPSPSPDEPHCALLDCIMFHSAVSGELPKEEPIPLLPKEFLFFPKTAFAL" XX SQ Sequence 3432 BP; 887 A; 742 C; 767 G; 1036 T; 0 other; ggcatttctt gtccatattt gcctaactga accaggtgaa tcactcccac catggggcaa 60 ttcattagtt tcatgcagga gatacctatt ttcttgcaag aagcactcaa cattgcattg 120 gtggcagtca gcctcatctg tatagtgaaa ggcttggtga acctatacag gtgcggactg 180 tttcaattga tggtcttcct tgtgttggct ggcagatcat gttcagagga aacatttaag 240 ataggtatgc acacaaaatt ccaagaggtg tccctctctt taagtgcact tttgaccaat 300 cagtctcatg aacttcctat gttatgttta gccaacaaaa cacatctcta tctaaagagt 360 ggtagatcca gtttcaaaat caacattgat agtgtcactg tgttaacaag atctgaagtg 420 aacttaacat caattaattt gacgagatcg atcgatgtct ttgttcactc tcctaaactt 480 ggttcttgtt ttgaaagtga tgaggagtgg gttgttgctt ggtggattga agccatcggt 540 cacagatggg accaggaccc aggtcttcta tgcaggaata aaaccaaaac agagggtaaa 600 ctgatccaga ttaacatttc aagagctgat ggcaatgttc actatggatg gagattaaaa 660 aatggacttg atcatattta cagaggacgt gaagaaccct gttttgaggg tgagcagtgt 720 cttatcaaaa ttcaacctga agactggccg actgactgta aggctgacca cacaaacaca 780 ttccgctttt tatcaaggag ccaaaaaagc atagctgtag gaaggactct caaggcattt 840 ttctcctggt cgcttactga ccctttaggg aacgaagccc ctgggggata ctgtcttgaa 900 aagtggatgc ttgttgctag cgaattaaag tgttttggga acactgcaat tgccaagtgc 960 aaccaaaatc acgactcaga gttttgtgac atgctaaggc tgtttgatta caacaaaaat 1020 gctataaaaa cactgaatga ggagactaag acgagggtga atgtcctgag ccacaccatc 1080 aatgctctga tctcagacaa ccttctgatg aagaataaga ttcgagagct gatgagtgta 1140 ccttattgca actacacacg attttggtat gtcaatcaca cactttcagg acagcactct 1200 cttccaagat gctggatgat aagaaacaat tcttacctca actcatctga atttagaaat 1260 gagtggattc ttgaaagtga tttcctcatt tctgagatgc tgggtaagga gtattcagag 1320 agacagggga gaactccaat cactttagtg gacatttgtt tttggagtac agtgttcttc 1380 actagcacac tattcttgca cctcattggt ttcccaactc atgaacacat tcgaggggaa 1440 ggttgccctc tcccccatag attgaacagc atgggaggat gtaggtgtgg gaagtatctg 1500 cctctgaaga agccaactat ttggcatcgt agacattagg acagcacatt tgcgctccca 1560 cgcgctttgc ccgggccggt gtggcccccc gatccgcgtt gccgcggatc ggggaggcac 1620 ctgtggtgcg gaagtcttac agctcacagt gcaaaagctg ttttgggaaa gaaaaggaac 1680 tctttgggta gtagtggtat tggttcctcc ttgggtagtt ctccactcac ggctgagtgg 1740 aacattatgc agtccagcag tgcacagtga ggttcatcag gactggggct tggtggagaa 1800 tctttgctct tattcttctt gctaataatc accccattat gttgtttgca gaggtggccg 1860 aatttatccc acacttggtg ctcgaatagt cttgcttgat ctgaagtgaa cttaacatca 1920 attaatttga gatctttcct tccgtgaata tctagaagct ttctgatgtc atcagatcct 1980 tgtgttgtaa tcaccatgtt gggaggtagt aaccctatga cataactgag cacacctggc 2040 acagcatcct caatgtcctt cattagaatg ccgtgagaat gtctgctccc atttttaaat 2100 cccttctcat catgtggctt tctgaagcag tggatgtatt gtttctttgc aggttgatat 2160 aatgcaagct ctactgggtc aagttggagg tcctcgatgt ccaaccaaat agtgttggag 2220 gggtcaagtt cactaatagc agctctgact attagttctt gcccctctgt gaggcttgcc 2280 agtcttaaat tttgcccctt tctttctgct ggccttggtg ctgctcctgg ttctggcact 2340 gcatccggct tcttggtcag atctacgctc gtgttgtccc aggatcgccc cataatttgc 2400 gatcgagagc ctatataggg ccagccatca cctgacaaac acagtttgta gagtaaattt 2460 tcgtaggggt tcctacttcc aggtctgtcg tcaataaaca taccctccct tctcttgact 2520 tgtaaggtgt ttttgatcag gctagagaag ttgtcgggac tcactctgat tgtctccaac 2580 atgttaccac catcaaggat ggaggctcct gcttttactg ctgccaacag actgaggttg 2640 taacctgaaa tgttaattga actctcttct ttggttataa tttgcagaca ctcatggttt 2700 gggatgagct tgtcaagatc agaaagattt gggtatttca ctgtataaag aaggcctaaa 2760 gaggtcaatg cttgaactac attgttcata gtctcccctc cttggacagt catacatgca 2820 attgttaatg caggcatgga tccaaattga ttgttcagtt tgctggaatc tttcacatcc 2880 caaactctaa caattccatt gggacgacct ccctgctgag caaatccgag tgttctcaaa 2940 atctcactcc tcctgttgag ttgagattgt ggcagatttc ccatgtaagc attggtacca 3000 ttgctctcag ttctttttat tttgtctttt agcttttcaa gatcggaggc cagttccatt 3060 agttcatccc ttgccaggtc accaactttg aagattgtgt tcttctgaac acttttcata 3120 gacatcagcc tgtcgacctc tatattgaga tccctcaatt tgttcaagtc atcatcggtt 3180 cttttggtct ttctaagcac tcgttgaact tgagcaacct ggttgaagtc aatgctgtcg 3240 gcaatcagct tagcgtcctt taaaatatct gacttgactg tttgggtgaa ttgactcaat 3300 ccctttctaa gagactgggt ccatctgaag cttggcactt ccttggattg agccattatg 3360 gcgatcaaag caaggatttc aaaaaagagc tcagtgaaag agttagacaa tttgcctagg 3420 atccactgtg cg 3432 //