ID M20021; SV 1; circular; genomic DNA; STD; VRL; 2750 BP. XX AC M20021; XX DT 20-FEB-1989 (Rel. 18, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 4) XX DE Chloris striate mosaic virus DNA, complete genome. XX KW circular; complete genome. XX OS Chloris striate mosaic virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2750 RX DOI; 10.1016/0042-6822(88)90558-2. RX PUBMED; 3369088. RA Andersen M.T., Richardson K.A., Harbison S.A., Morris B.A.; RT "Nucleotide sequence of the geminivirus chloris striate mosaic virus"; RL Virology 164(2):443-449(1988). XX DR MD5; ce7735db7dd41646f12466af360dd28c. DR GOA; P18919. DR GOA; P18921. DR InterPro; IPR001146; Gemini_AL1_MSV. DR InterPro; IPR001191; Gemini_AL1_REP. DR InterPro; IPR001301; Gemini_AL1_CLV. DR InterPro; IPR022690; Gemini_AL1_REP_cat-dom. DR InterPro; IPR022692; Gemini_AL1_REP_central. DR InterPro; IPR027417; P-loop_NTPase. DR UniProtKB/Swiss-Prot; P18919; REP_CSMV. DR UniProtKB/Swiss-Prot; P18921; REPA_CSMV. XX CC Draft entry and computer-readable sequence [1] kindly submitted by CC B.A.M. Morris 09-AUG-1988. XX FH Key Location/Qualifiers FH FT source 1..2750 FT /organism="Chloris striate mosaic virus" FT /mol_type="genomic DNA" FT /db_xref="taxon:10820" FT stem_loop 150..182 FT CDS 234..656 FT /codon_start=1 FT /note="14.5 K ORF (CSMV1)" FT /protein_id="AAA67096.1" FT /translation="MGLSPAMRSALPCFGGFIKPFSDLCFPMQYQGYEQLSRSGSVEQP FT SPGASFAFPVKVTALVCFAAIVGACILVFLYKTCIADCITQYRLTDYGCHTSAGFGGAL FT PVTSAQASAGTSTPVCVPCAPQVQASVDLPSVSRVS" FT regulatory 284..289 FT /regulatory_class="TATA_box" FT CDS 315..656 FT /codon_start=1 FT /note="11.7 K ORF (CSMV2); putative" FT /protein_id="AAA67097.1" FT /translation="MQYQGYEQLSRSGSVEQPSPGASFAFPVKVTALVCFAAIVGACIL FT VFLYKTCIADCITQYRLTDYGCHTSAGFGGALPVTSAQASAGTSTPVCVPCAPQVQASV FT DLPSVSRVS" FT CDS 653..1378 FT /codon_start=1 FT /note="26.8 K ORF (CSMV4); putative" FT /db_xref="GOA:P14985" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/Swiss-Prot:P14985" FT /protein_id="AAA67098.1" FT /translation="MSPASSWKRKRPSSSSAQASKKRRVYRPAVSRSLARREPLQVQDF FT VWDTDVAFNRGGGCYLLTSYARGSAENQRKTAETITYKVAVNLGCAISGTMQQYCISSR FT PVCWIVYDAAPTGSAVTPKDIFGYPEGLVNWPTTWKVARAVSHRFIVKRRWVFTMESNG FT SRFDRDYTNLPAAIPQSLPVLNKFAKQLGVRTEWKNAEGGDFGDIKSGALYLVMAPANG FT AVFVARGNVRVYFKSVGNQ" FT stem_loop 676..699 FT stem_loop 1304..1320 FT misc_feature 1376..1578 FT /note="noncoding region" FT stem_loop 2209..2231 FT stem_loop 2531..2554 FT stem_loop 2689..2710 XX SQ Sequence 2750 BP; 584 A; 718 C; 756 G; 692 T; 0 other; taataaaaga cgacgtggct tgatggacag ccgtaggatg tgttctgaga tgtggactcc 60 gagcaaaact atctctaata ccagttgccc acctgccgag tgccctcttc ggcttttatg 120 ggccataaca ggccggctct ttgcatgggc gggggggcaa ccataatatt accgcccccc 180 cggcccatgc gagggcccat gctcaacggg tcccgagcgg ctttggcttt cacatgggct 240 tgtcccccgc gatgcgatct gctctgccat gctttggcgg ctttataaag ccgttctcag 300 acctttgttt tccaatgcag taccaggggt acgagcagct cagtagatct ggatccgtgg 360 agcaacccag ccccggtgct agctttgctt tcccggtgaa ggtgacagcc ctcgtctgtt 420 tcgcagcgat tgttggagcc tgtattcttg tattcttgta caagacgtgc attgcggact 480 gcataacgca gtaccggctt acggactacg gctgtcacac ttcggctggg ttcggaggtg 540 cgttacccgt gacctctgcg caagctagtg ctggtaccag cacccctgtg tgtgttccct 600 gtgctcctca ggtacaggcg tccgtggatc taccctccgt aagtagggtg tcatgagtcc 660 tgccagctca tggaagagga agaggccctc ttcttcctcc gctcaggcgt ctaagaagcg 720 ccgcgtgtac aggcctgctg tttcacgttc tctcgctcgg cgagaacctc tgcaggtgca 780 agactttgtc tgggatacag atgtggcttt caatagggga ggaggatgct acctcctcac 840 tagctatgct cgaggctctg ccgagaatca gcggaagacc gctgagacca tcacgtacaa 900 ggtggcagtt aacctggggt gtgctatctc cgggacgatg cagcaatatt gcatcagctc 960 ccgaccggtc tgctggattg tatacgacgc ggcccccact ggctctgctg ttaccccgaa 1020 ggacatcttc gggtacccgg aaggattagt taactggcct actacttgga aggtggccag 1080 agcggtgtcc caccgcttca tagtgaagcg ccgatgggtc ttcaccatgg agtccaacgg 1140 ctcgcgcttc gaccgtgact acaccaacct cccggctgct ataccgcagt cccttcccgt 1200 tctgaacaag ttcgcgaagc agttgggcgt gcggaccgag tggaagaacg ctgaaggcgg 1260 agacttcggc gacataaaga gcggagctct ttacctagtc atggctccgg ctaacggagc 1320 tgtctttgta gcccgcggca atgtccgcgt gtattttaag tctgttggga atcagtgatt 1380 ccccagactt cattttcaat aaactgtgag agtttgcttg ccaaacaaca taatttcatt 1440 cataacgatg gcgcagtatg cgcaatacat ttaaaagaag ggcggacagg acaaaggcgg 1500 gcggctaagg gaagccgcaa ggggcaacac cacatcccaa gaatgagttt tggaatatgc 1560 agccgctggc ttcacgctat tccgaaggaa tgaaggtttc ccctgggaga aggtgataca 1620 ccacggcgtt gccgtgaaac cagtcgacct gttgggtcga catcgactgc agccagtctt 1680 catcctcgtt tacgaggata atacatggaa tcccgttggg gattcttttc ttcttcccgt 1740 acttggggtt taccgtcagg tcatactggc tgccgacgag tcccttccaa caagggacga 1800 acttgaacgg gatgtcatca atgatgttga actgggcctg gcagttccat tcctctagga 1860 agttcactga gtgctgccag tagtgatgag ttccaagact tctggcccaa gaagtctttc 1920 cagttcttgt tggcccacag atgtacaggc ttcgtctccg gactccaggg ctccagacct 1980 ggttaggtca gacatccatt ggaggtcaat acgtgcttgt tcctccgaaa tacctgcatg 2040 cagactgagg gcttgaggac ttacagtata cagctcctgc tggagccatt ctcctatgac 2100 cggatggtcg gacatgtccc ttgacgcgta tggcgcggag taggtttgag gagggtcagg 2160 gaacagggca tttgcactgt attggaattg ctgtaggcgt accgcccatt cgaaagggaa 2220 actctttcga accatgctca gatattcgtc cctggacgtg gcgtttgcca tgatttgttt 2280 catggtcttg tccctagagg ccgactgggt cggactcctg ttgaccttgg gtttcaggaa 2340 ttttccaaat tcccagctac tctcaggatg tttcatacag tatttcagag tactggctgg 2400 ctgccttgca gcttggatat ttggatgaaa ttcatccagg tcaaagtatt ttggagaggt 2460 ggttctgaaa tttgcttcga gttggacgaa ggcatgtaag tggggctcac cgtcagcatg 2520 gaattccctg gaaatgtaaa tataattaca tttcttattt tttagacggt cagcaatttt 2580 ctgaccagcc tcttcgggac tgataggaca cctgggatag gtgaggaaga catgtttagt 2640 cctcagggag aaggccttct ccccaggcgt cacttgccct ccgcgagatg gcacttgtac 2700 ggaagtgcca cttccctccc cctcgctctc actgacaggc agggacgaca 2750 //