ID M18049; SV 1; linear; genomic RNA; STD; VRL; 3097 BP. XX AC M18049; X04124; XX DT 23-MAY-1995 (Rel. 43, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 7) XX DE Infectious pancreatic necrosis virus segment A RNA encoding a polyprotein, DE 3' end. XX KW nonstructural protein; polyprotein; protease. XX OS Infectious pancreatic necrosis virus OC Viruses; Riboviria; Birnaviridae; Aquabirnavirus. XX RN [1] RP 1-3097 RX DOI; 10.1093/nar/14.14.5934. RX PUBMED; 3737418. RA Duncan R., Dobos P.; RT "The nucleotide sequence of infectious pancreatic necrosis virus (IPNV) RT dsRNA segment A reveals one large ORF encoding a precursor polyprotein"; RL Nucleic Acids Res. 14(14):5934-5934(1986). XX RN [2] RP 1416-3097 RX PUBMED; 3316706. RA Duncan R., Nagy E., Krell P.J., Dobos P.; RT "Synthesis of the infectious pancreatic necrosis virus polyprotein, RT detection of a virus-encoded protease, and fine structure mapping of genome RT segment A coding regions"; RL J. Virol. 61(12):3655-3664(1987). XX DR MD5; 6c4b60cec79caa360222ba9451d78077. DR EuropePMC; PMC110308; 9765436. DR EuropePMC; PMC348913; 14766589. XX CC On Feb 26, 2002 this sequence version replaced gi:60491. CC Draft entry and computer-readable sequence for [2],[Nucleic Acids CC Res. 14, 5934-5934 (1986)] kindly CC provided by P.Krell, 23-FEB-1988. CC The precise boundaries of the mature proteins have as yet not been CC determined. XX FH Key Location/Qualifiers FH FT source 1..3097 FT /organism="Infectious pancreatic necrosis virus" FT /segment="A" FT /strain="Jasper" FT /mol_type="genomic RNA" FT /db_xref="taxon:11002" FT CDS 68..514 FT /codon_start=1 FT /product="unknown protein" FT /note="putative" FT /db_xref="InterPro:IPR004284" FT /db_xref="UniProtKB/Swiss-Prot:P22931" FT /protein_id="AAA89178.1" FT /translation="MAKALSNKQPTILIYMNHEHIQGNRNLLEIHYASREWASKHSGRH FT NREAYTKTRDLVIQLRGIRIRKWASCLLPRSSWIQGRCPLQVESEPDGTRIRPVARDVT FT GPKEGIQLRETDLTEIRHPELNPSRWSVCTQWDPERCHLRRKSV" FT CDS 120..3038 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:P05844" FT /db_xref="InterPro:IPR002662" FT /db_xref="InterPro:IPR002663" FT /db_xref="InterPro:IPR025775" FT /db_xref="InterPro:IPR029053" FT /db_xref="PDB:3ZED" FT /db_xref="UniProtKB/Swiss-Prot:P05844" FT /protein_id="AAA89179.1" FT /translation="MSTSKATATYLRSIMLPENGPASIPDDITERHILKQETSSYNLEV FT SESGSGLLVCFPGAPGSRVGAHYRWNLNQTALEFDQWLETSQDLKKAFNYGRLISRKYD FT IQSSTLPAGLYALNGTLNAATFEGSLSEVESLTYNSLMSLTTNPQDKVNNQLVTKGITV FT LNLPTGFDKPYVRLEDETPQGPQSMNGARMRCTAAIAPRRYEIDLPSERLPTVAATGTP FT TTIYEGNADIVNSTAVTGDITFQLEAEPVNETRFDFILQFLGLDNDVPVVTVTSSTLVT FT ADNYRGASAKFTQSIPTEMITKPITRVKLAYQLNQQTAIANAATLGAKGPASVSFSSGN FT GNVPGVLRPITLVAYEKMTPQSILTVAGVSNYELIPNPDLLKNMVTKYGKYDPEGLNYA FT KMILSHREELDIRTVWRTEEYKERTRAFKEITDFTSDLPTSKAWGWRDLVRGIRKVAAP FT VLSTLFPMAAPLIGAADQFIGDLTKTNSAGGRYLSHAAGGRYHDVMDSWASGSEAGSYS FT KHLKTRLESNNYEEVELPKPTKGVIFPVVHTVESAPGEAFGSLVVVIPEAYPELLDPNQ FT QVLSYFKNDTGCVWGIGEDIPFEGDDMCYTALPLKEIKRNGNIVVEKIFAGPAMGPSSQ FT LALSLLVNDIDEGIPRMVFTGEIADDEETVIPICGVDIKAIAAHEHGLPLIGCQPGVDE FT MVANTSLASHLIQGGALPVQKAQGACRRIKYLGQLMRTTASGMDAELQGLLQATMARAK FT EVKDAEVFKLLKLMSWTRKNDLTDHMYEWSKEDPDAIKFGRLVSTPPKHQEKPKGPDQH FT TAQEAKATRISLDAVKAGADFASPEWIAENNYRGPSPGQFKYYMITGRVPNPGEEYEDY FT VRKPITRPTDMDKIRRLANSVYGLPHQEPAPDDFYQAVVEVFAENGGRGPDQDQMQDLR FT DLARQMKRRPRPAETRRQTKTPPRAATSSGSRFTPSGDDGEV" XX SQ Sequence 3097 BP; 885 A; 904 C; 799 G; 509 T; 0 other; ggaaagagag tttcaacgtt agtggtaacc cacgagcgga gagctcttac ggaggagctc 60 tccgtcgatg gcgaaagccc tttctaacaa acaaccaaca attcttatct acatgaatca 120 tgagcacatc caaggcaacc gcaacctact tgagatccat tatgcttccc gagaatgggc 180 cagcaagcat tccggacgac ataacagaga ggcatatact aaaacaagag acctcgtcat 240 acaacttaga ggtatccgaa tcaggaagtg ggcttcttgt ctgcttcccc ggagctcctg 300 gatccagggt cggtgcccac tacaggtgga atctgaacca gacggcacta gaattcgacc 360 agtggctaga gacgtcacag gacctaaaga aggcattcaa ctacgggaga ctgatctcac 420 ggaaatacga catccagagc tcaacccttc ccgctggtct gtatgcactc aatgggaccc 480 tgaacgctgc caccttcgaa ggaagtctgt ctgaagtaga gagcctaacc tacaacagct 540 tgatgtccct aacaacaaac ccacaggaca aggtcaacaa tcaactagtg accaaaggaa 600 ttaccgtcct gaatctacca actgggtttg acaagccata cgtccgccta gaggacgaga 660 caccacaggg cccccagtcc atgaacggag caaggatgag gtgcacagct gccatcgcac 720 caaggaggta tgaaatcgac ctcccatccg aacgactgcc gaccgtggcc gcgactggga 780 ccccaacaac aatttatgag gggaatgctg acatcgtgaa ctccacagca gtcaccgggg 840 acataacatt ccagctcgag gccgaacccg tcaatgagac acggttcgac ttcattctac 900 agttcctggg gctggacaac gacgtccccg tggttaccgt gacaagctcc acgctagtca 960 cagcggacaa ctacaggggg gcgtcagcca agttcaccca gtcaatccca acagaaatga 1020 ttaccaaacc aatcacacgg gtcaagctgg cctaccagct caaccagcag accgcaattg 1080 caaacgcagc aacgctcgga gccaaggggc cggcatcagt ctcattctca tccgggaacg 1140 gcaatgtgcc gggggtccta agacccataa ccctagtggc gtacgagaag atgacccccc 1200 agtcaatcct gaccgtggct ggcgtatcca actatgagct gatcccaaac ccagacctac 1260 tgaagaacat ggtcaccaag tatggaaagt atgaccctga gggcctcaac tatgccaaga 1320 tgatcctgtc ccacagagag gagctggaca ttagaaccgt ctggaggact gaggaataca 1380 aagaaaggac aagagcattc aaagagatca ctgacttcac aagtgaccta ccaacctcaa 1440 aggcatgggg atggagggac ctggtcagag gcatcagaaa agtggccgcc cccgtgctgt 1500 caacgctctt cccaatggcg gctcccctta taggagctgc cgaccaattc attggggacc 1560 tcaccaagac caactcagcc gggggacgct acctgtcaca cgcagccgga ggccgctacc 1620 atgatgtcat ggactcatgg gccagcgggt ccgaggcagg aagctattca aagcacctca 1680 agacccggct tgagtccaat aactatgagg aagtggagct tccaaagcca acaaagggag 1740 tcatctttcc tgtggtgcac accgttgaga gtgcaccagg tgaggccttc gggtcgctcg 1800 tggtagtaat accagaagcg tacccggaac ttcttgaccc aaaccaacag gtcctatcct 1860 acttcaagaa cgacacaggc tgcgtctggg ggataggaga agacatcccc tttgaaggag 1920 atgacatgtg ctacaccgca ctgcccctca aggagatcaa gaggaacgga aacatcgtgg 1980 tggagaaaat attcgctggc cccgcgatgg gaccgtcctc ccaacttgca ctgtccctgc 2040 tcgtcaacga catagacgaa gggattccaa ggatggtctt cacaggcgag attgccgatg 2100 acgaagaaac agtcatccca atctgcggag tggacatcaa agccatagcc gcccatgaac 2160 acgggctgcc cctcattggc tgtcagccag gggtcgacga gatggtggca aacacatctc 2220 tcgcatcaca cctgattcag ggcggggccc taccagtgca gaaagcacag ggcgcctgca 2280 ggagaatcaa gtacctgggc cagctgatga gaacaactgc atcagggatg gacgcagaac 2340 tgcaggggct gctgcaggcc accatggcca gagcaaaaga agtgaaggac gccgaagtgt 2400 tcaaacttct gaaactcatg tcatggacaa gaaagaacga cctcacagat cacatgtatg 2460 agtggtcaaa ggaggatcct gatgcaatca aatttggcag gctcgtcagc acccccccaa 2520 aacaccaaga gaagccaaaa ggacctgacc agcacaccgc ccaggaggca aaggccacca 2580 ggatttcact ggacgccgtc aaagccggcg cagactttgc ctccccagag tggatcgcgg 2640 agaacaacta ccgcggccca tccccaggcc agttcaagta ctacatgata acgggcagag 2700 tcccaaaccc cggagaagag tacgaggact atgtgcgaaa accgataacc cgaccaaccg 2760 acatggacaa aatcagacgc ctagccaaca gtgtctacgg cctgccccac caagaacccg 2820 caccagacga cttctaccag gcagtcgtcg aggtgttcgc agaaaacggg ggaagagggc 2880 ccgaccaaga ccaaatgcaa gacctgaggg acttggcaag gcagatgaaa cgacgacccc 2940 gaccagctga gacacgcagg caaaccaaga ctccacccag ggcggcaacc tccagtggat 3000 cgcggtttac cccctccggc gatgacggag aagtgtaaca gctactctct ttcctgactg 3060 atcccctggc cgtaaccccg gccccccagg gggcccc 3097 //