ID M16248; SV 1; linear; genomic RNA; STD; VRL; 7152 BP. XX AC M16248; XX DT 02-APR-1988 (Rel. 15, Created) DT 10-FEB-2003 (Rel. 74, Last updated, Version 3) XX DE Human rhinovirus type 89 (HRV89), complete genome. XX KW . XX OS Human rhinovirus A89 OC Viruses; Riboviria; Picornavirales; Picornaviridae; Enterovirus; OC Rhinovirus A. XX RN [1] RP 1-7152 RX DOI; 10.1073/pnas.84.9.2605. RX PUBMED; 3033653. RA Duechler M., Skern T., Sommergruber W., Neubauer C., Gruendler P., Fogy I., RA Blaas D., Kuechler E.; RT "Evolutionary relationships within the human rhinovirus genus: comparison RT of serotypes 89, 2, and 14"; RL Proc. Natl. Acad. Sci. U.S.A. 84(9):2605-2609(1987). XX RN [2] RP 1-7152 RA Kuechler E.; RT ; RL Submitted (20-JUL-1987) to the INSDC. RL Institut fuer Biochemie, der Universitaet Wien, Wahringer Strasse 17, RL Vienna A-1090, Austria XX DR MD5; b9a2b7c3ce1194ebc9ffadca232f548f. DR EuropePMC; PMC110230; 9733894. DR EuropePMC; PMC112895; 10482628. DR EuropePMC; PMC1949831; 17623054. DR EuropePMC; PMC2238069; 18057136. DR RFAM; RF00229; IRES_Picorna. DR RFAM; RF00386; Entero_5_CRE. XX FH Key Location/Qualifiers FH FT source 1..7152 FT /organism="Human rhinovirus A89" FT /mol_type="genomic RNA" FT /db_xref="taxon:12132" FT CDS 619..7113 FT /codon_start=1 FT /product="HRV89 polyprotein precursor" FT /db_xref="GOA:P07210" FT /db_xref="InterPro:IPR000081" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR002527" FT /db_xref="InterPro:IPR003138" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR014838" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="InterPro:IPR036203" FT /db_xref="InterPro:IPR036988" FT /db_xref="UniProtKB/Swiss-Prot:P07210" FT /protein_id="AAA45762.1" FT /translation="MGAQVSRQNVGTHSTQNSVSNGSSLNYFNINYFKDAASSGASRLD FT FSQDPSKFTDPVKDVLEKGIPTLQSPTVEACGYSDRLIQITRGDSTITSQDTANAVVAY FT GVWPSYLTPDDATAIDKPTQPDTSSNRFYTLDSRSWTSASSGWWWKLPDALKNMGIFGE FT NMFYHFLGRSGYTIHVQCNSSKFHQGLLIVAAIPEHQLASATSGNVSVGYNHTHPGEQG FT REVVPSRTSSDNKRPSDDSWLNFDGTLLGNLPIYPHQYINLRTNNSATLILPYVNAVPM FT DSMLRHNNWSLVIIPICPLQVQPGGTQSIPITVSISPMFSEFSGPRSKVVFSTTQGLPV FT MLTPGSGQFLTTDDTQSPSAFPYFHPTKEIFIPGQVRNLIEMCQVDTLIPVNNTQENVR FT SVNMYTVDLRTQVDLAKEVFSIPVDIASQPLATTLIGELASYYTHWTGSLRFSFMFCGS FT ASSTLKLLIAYTPPGVGKPKSRREAMLGTHLVWDVGLQSTASLVVPWVSASHFRFTTPD FT TYSSAGYITCWYQTNFVVPDSTPDNAKMVCMVSACKDFCLRLARDTNLHTQEGVLTQNP FT VENYIDSVLNEVLVVPNIQPSTSVSSHAAPALDAAETGHTSSVQPEDMIETRYVITDQT FT RDETSIESFLGRSGCIAMIEFNTSSDKTEHDKIGKGFKTWKVSLQEMAQIRRKYELFTY FT TRFDSEITIVTAAAAQGNDSGHIVLQFMYVPPGAPVPEKRDDYTWQSGTNASVFWQEGQ FT PYPRFTIPFMSIASAYYMFYDGYDGDSAASKYGSVVTNDMGTICVRIVTSNQKHDSNIV FT CRIYHKAKHIKAWCPRPPRAVAYQHTHSTNYIPSNGEATTQIKTRPDVFTVTNVGPSSM FT FVHVGNLIYRNLHLFNSDLDDSILVSYSSDLIIYRTNTEGNDVIPNCDCTECTYYCHHK FT DRYFPIRVTAHDWYEIQESEYYPKHIQYNLLIGEGPCEPGDCGGKLLCKHGVIGMITAG FT GEGHVAFIDLRKFQCAEEQGLSDYVEHLGQVFGVGFVDSIKQQVNFINPTSKIGSKVIK FT WLLRIVSAMIIMVRNSSDPQTVIATLTLLGCSGSPWRFLKEKLCAWLQLSYVHKQSDSW FT LKKFTEACNAARGLEWIGQKISKFIDWIKSMLPQAQLKIDYLTKLKQLNLLEKQIETIR FT LAPASVQEKIFIEINTLHDLSLKFLPLYASEARRIKNLYIKCSNVIKGGKRNEPVAVLI FT HGSPGTGKSLATSVLARMLTVETDIYSLPPDPKYFDGYDQQSVVIMDDIMQNPSGEDMT FT LFCQMVSSVPFIPPMADLPDKGKPFTSKFVLASTNHTLLTPPTVSSLPAMARRFYFDLD FT IQVKKEYLLDGKLDIAKSFRPCDVNIKIGNAKCCPFICGKAVEFKDRNSCTTLSLSQLY FT SHIKEEDRRRSSAAQAMEAIFQGIDLQSPPPPAIADLLRSVKTPEIIKYCQDNNWIVPA FT ECSIERDLGIANMTIGIIANVVSIVGVIYIIYKLFCTLQGPYSGEPKPKSRAPERRVVT FT QGPEEEFGRSLLKHNCCVVTTDKGKFTGLGIYDQVMVLPTHSDPGSEILVDGVKVKVSD FT SYDLHNHEGVKLEITVVKLIRNEKFKDIRKYLPSREDDYPACNLALLANQDEPTIISVG FT DAVSYGNILLSGTNTARMIKYHYPTKAGYCGGVLYKVGSILGIHVGGNGRDGFSAMLLK FT SYFGETQGLITKELPVSVKNLPSVHVSSKTRLQPSVFHDVFPGTKEPAVLSSNDPRLET FT DFDSALFSKYKGNPACQVTPHMKIAVAHYAAQLSTLDINPQPLSLEESVFGIEGLEALD FT LNTSAGFPYVSLGIKKKDLIDKKTKDITKLRKAIDEYGIDLPMVTFLKDELRKKEKIKD FT GKTRVIEANSVNDTVLFRSVFGNLFSAFHKNPGIVTGSAVGCDPEVFWSTIPLMLDGEC FT LMAFDYSNYDGSLHPVWFKCLSMLLEDIGFSSQLINQICNSKHIYKSKYYEVEGGMPSG FT CAGTSIFNTIINNIIIRTLVLDAYKNIDLDKLKILAYGDDVIFSYNFKLDMAVLAKEGE FT KYGLTITPADKSDVFQELTYKNVTFLKRGFRADERHSFLIHPTFPVAEIHDSIRWTKNP FT SCMQEHVLSLCHLMWHNGRHAYQEFIKGIRSVSAGRALYIPAYEVLEHEWYEKF" FT mat_peptide 619..825 FT /product="VP4 polypeptide" FT mat_peptide 826..1626 FT /product="VP2 polypeptide" FT mat_peptide 1627..2340 FT /product="VP3 polypeptide" FT mat_peptide 2341..3234 FT /product="VP1 polypeptide" FT mat_peptide 3235..3642 FT /product="P2-A polypeptide" FT mat_peptide 3643..3927 FT /product="P2-B polypeptide" FT mat_peptide 3928..4890 FT /product="P2-C polypeptide" FT mat_peptide 4891..5118 FT /product="P-3A polypeptide" FT mat_peptide 5119..5181 FT /product="VPg polypeptide" FT mat_peptide 5182..5730 FT /product="protease" FT mat_peptide 5731..7110 FT /product="polymerase" XX SQ Sequence 7152 BP; 2241 A; 1382 C; 1410 G; 2119 T; 0 other; ttaaaactgg gagtgggttg ttcccactca ctccacccat gcggtgttgt actctgttat 60 tacggtaact ttgtacgcca gtttttccca cccttcccca taatgtaact tagaagtttg 120 tacaatatga ccaataggtg acaatcatcc agactgtcaa aggtcaagca cttctgtttc 180 cccggtcaat gaggatatgc tttacccaag gcaaaaacct tagagatcgt tatccccaca 240 ctgcctacac agagcccagt accatttttg atataattgg gttggtcgct ccctgcaaac 300 ccagcagtag acctggcaga tgaggctgga cattccccac tggcgacagt ggtccagcct 360 gcgtggctgc ctgctcaccc ttcttgggtg agaagcctaa ttattgacaa ggtgtgaaga 420 gccgcgtgtg ctcagtgtgc ttcctccggc ccctgaatgt ggctaacctt aaccctgcag 480 ccgttgccca taatccaatg ggtttgcggt cgtaatgcgt aagtgcggga tgggaccaac 540 tactttgggt gtccgtgttt cctgtttttc ttttgattgc attttatggt gacaatttat 600 agtgtataga ttgtcatcat gggtgcacaa gtatctagac aaaatgttgg gacacactcc 660 acacaaaatt cagtgagcaa tggatctagc ttaaattatt tcaacatcaa ttattttaaa 720 gacgcagctt caagtggtgc ttctagattg gatttttctc aagaccctag taaatttact 780 gatcctgtta aagatgtgtt agaaaagggt attccaacac ttcaatcacc aacagttgaa 840 gcttgtggtt attcagacag actaatacag ataacccgag gagattccac tataacatcc 900 caagatactg caaatgcagt tgttgcttat ggtgtgtggc catcatactt gactccagat 960 gatgcgactg ctattgacaa acccacacaa cctgatacat catccaacag attctacacc 1020 ttggacagtc gttcttggac atctgcctca tctggatggt ggtggaaatt gcctgatgcc 1080 cttaaaaaca tgggtatatt tggtgaaaat atgttttacc attttctagg gagatctgga 1140 tacacaatac atgtacaatg taattctagc aagtttcatc agggtttatt aatagttgcc 1200 gccatcccag aacatcaatt ggcatctgca acaagtggaa atgtatcagt cgggtacaat 1260 cacacccacc caggtgagca aggtagagaa gtagtaccat cacggacatc tagtgataat 1320 aaaagaccta gtgatgacag ttggttaaat tttgatggaa cattacttgg taacttacct 1380 atttatcccc accaatacat taatctaagg actaacaatt cagctaccct tattttacct 1440 tatgtcaatg ctgtaccaat ggactctatg cttagacata ataattggag cttggttata 1500 atcccaatat gccctcttca ggtccaacct ggggggacac aatccatacc tataacagta 1560 tcaattagcc ctatgttttc agaattttca gggccaagaa gtaaggttgt gtttagtacc 1620 actcagggtt taccagttat gttaacacct ggatctgggc aattcttaac aactgatgat 1680 actcaatccc catcagcgtt tccatacttc cacccgacca aggaaatatt tatacctgga 1740 caagttagga atttaattga aatgtgccaa gttgacacac tcattcctgt taacaataca 1800 caggaaaatg taagatctgt gaatatgtac actgttgatt tacgcacaca agttgattta 1860 gctaaagaag tcttttctat accagtagat attgcctcac aacctttagc cactactctc 1920 ataggagaac ttgcaagcta ttacacacac tggactggta gtctgcgctt tagctttatg 1980 ttttgtggtt ctgctagctc tactttgaaa ctattaattg catacactcc tcctggtgtt 2040 ggaaaaccta aatccaggag agaagccatg cttggtacac atttagtgtg ggatgtgggg 2100 ttgcagtcca ccgcctcact agttgtacca tgggttagtg ctagccattt tagattcact 2160 acacctgaca catattcctc agctggttat attacatgct ggtaccagac caactttgta 2220 gtacctgata gtactccaga taacgccaaa atggtgtgca tggtttctgc atgcaaagat 2280 ttttgcttaa gattagccag agatactaac ctacacacac aagaaggagt actcacacaa 2340 aacccagttg aaaattatat agatagtgta ttaaatgaag ttcttgtggt gccaaatatc 2400 caacctagca catctgtgtc aagtcatgca gcgcctgcat tggatgctgc ggaaaccgga 2460 cacaccagct ctgttcaacc tgaagatatg attgaaacta gatatgttat aactgatcaa 2520 acaagggatg aaacaagtat tgagagtttc ttaggtaggt cagggtgtat cgctatgata 2580 gaatttaata caagtagtga taaaactgaa catgataaaa ttggtaaagg attcaaaaca 2640 tggaaggtta gtcttcaaga aatggcacaa atcagaagaa aatatgaatt attcacatat 2700 acaagatttg attcagagat aacaatagtc actgcagccg cagctcaagg aaatgatagt 2760 ggacatatag tattgcaatt tatgtatgta cccccaggag cacctgtccc cgaaaaacgt 2820 gatgattaca catggcaatc aggaacaaat gcatctgtgt tctggcaaga aggacaacca 2880 taccccagat tcacaatccc ttttatgagc attgcatcag cctattacat gttttatgat 2940 ggttatgatg gtgatagtgc agcatcaaaa tacggttctg tagtcactaa tgatatggga 3000 accatatgtg ttagaatagt gacatccaac caaaaacacg attcaaatat tgtgtgccgc 3060 atttaccaca aggccaaaca tataaaagca tggtgtcctc gcccaccaag ggctgttgcc 3120 tatcaacaca cacactcaac caattacata ccatccaatg gtgaggccac aactcagatt 3180 aaaaccagac ctgatgtttt taccgttaca aacgtcggac catctagtat gtttgtacat 3240 gtgggtaact taatctatag aaatcttcat ctctttaatt ctgatcttga tgattctatt 3300 cttgtatcat actccagtga tctaatcata tatcgaacaa acactgaagg taatgatgtg 3360 atccctaatt gtgattgcac tgaatgtaca tattactgcc accacaaaga taggtatttt 3420 cctatcagag ttactgcaca tgattggtat gagattcaag aatcagaata ttacccaaaa 3480 catatccaat ataatctcct gattggagag ggtccttgtg aaccaggaga ttgtggagga 3540 aaactattgt gtaaacatgg tgttataggt atgattacag ctggaggtga aggtcacgtt 3600 gcttttattg acctgagaaa attccagtgt gctgaggagc aagggttatc tgattatgtg 3660 gaacatcttg gtcaagtctt tggtgtaggc ttcgtagaca gcatcaaaca acaggtaaac 3720 tttatcaacc ccactagtaa aattggttca aaagtgatta aatggttgtt gaggatagtt 3780 tcagctatga taataatggt aaggaatagt tctgatccac aaactgtaat tgccactctc 3840 acccttctag gttgttcagg ctcaccatgg aggtttctta aagagaaact ctgtgcgtgg 3900 ctccagctta gctatgtaca taagcagtct gattcatggc tcaagaaatt tactgaagcg 3960 tgtaacgcag cacgtgggct agagtggatt ggacaaaaga tatctaaatt tatagattgg 4020 ataaagagta tgttaccaca ggctcaattg aaaattgatt acctaaccaa attaaaacaa 4080 cttaatctct tagagaaaca aatagaaaca attagacttg cacctgctag tgttcaggag 4140 aaaattttca ttgaaataaa cacccttcat gatttatcct taaaattctt accactgtat 4200 gcatctgaag cacgtagaat taagaattta tatatcaaat gcagtaatgt tattaaaggg 4260 ggaaagagga atgaaccagt tgcagttcta atacatggtt ctcctggtac tggaaaatct 4320 cttgccactt ctgttcttgc tcgaatgcta actgttgaga ctgatatata ttctttgccc 4380 ccagatccta aatattttga tgggtatgat caacagagtg ttgttatcat ggatgatatc 4440 atgcaaaatc ctagtggtga agacatgact ttgttttgcc aaatggtatc gagtgtccct 4500 ttcatacctc ctatggcaga tcttccagat aaaggaaaac catttacatc caagtttgta 4560 cttgcaagca ctaatcacac tctactaaca ccaccaacag tatcttcatt accagcaatg 4620 gcaagaaggt tttactttga tctagacatt caagttaaga aagagtatct tttagatggc 4680 aaactagata tagcaaaaag ctttcgacca tgtgatgtta atattaaaat aggcaatgct 4740 aagtgctgtc catttatctg tggaaaagct gtagagttta aagatagaaa ttcatgtaca 4800 accttgtctt tatctcaatt gtatagtcat ataaaggaag aagataggag aagaagcagt 4860 gcagcacaag caatggaggc tatatttcaa ggtatagacc tccaatctcc tccacctcca 4920 gccatagctg acctccttag gtctgtgaaa acaccagaga tcattaagta ttgccaagat 4980 aataattgga ttgttccagc agagtgttct attgaaagag atttagggat agcaaatatg 5040 actataggta taatagctaa tgtggtctct atagtaggtg ttatctatat aatttataaa 5100 ttgttctgta cacttcaggg tccatactca ggggaaccta aacccaaaag cagagctcca 5160 gagagaagag tagttactca gggcccagag gaagagtttg gtcgctcact actcaaacat 5220 aattgctgtg ttgtgacaac cgacaaaggc aaattcacag gtcttggcat atatgaccaa 5280 gtcatggtac ttccaacaca ttctgaccca ggctctgaga tcttggtaga tggagtaaaa 5340 gttaaggtct ctgattccta tgatttgcat aaccatgagg gtgttaagct agagatcaca 5400 gttgtgaaat taattagaaa tgagaagttt aaagacatca gaaaatattt accctcacgt 5460 gaagatgact atcctgcttg taaccttgcc ttactagcta atcaagatga gccaacaata 5520 ataagtgttg gtgatgcagt atcttatggt aacatcttat tgagtggtac caatactgca 5580 cgaatgatca agtaccatta cccgacaaaa gctggatatt gtgggggtgt tttgtacaag 5640 gttggctcta ttcttggtat acatgttggt ggcaatggta gagatggatt ttctgcaatg 5700 cttctcaaat cttattttgg tgaaacccag ggtttaatca ctaaagaact tcctgtatct 5760 gtaaagaact taccatccgt acatgtttca tctaaaaccc gactacaacc tagtgttttt 5820 catgatgttt tccctggaac aaaagagcct gcagttctta gtagtaatga tccaagacta 5880 gaaactgact ttgactcagc acttttctcc aaatataaag gtaatcctgc ttgtcaagtg 5940 accccacaca tgaaaattgc tgtagcacat tatgcagcac agttatctac actagacata 6000 aatcctcaac ccctttcatt ggaagagagt gtgtttggta ttgagggatt agaagctttg 6060 gatttaaata ctagtgcagg atttccttat gtttcactgg gaataaagaa gaaagatctt 6120 atagataaaa agaccaaaga catcacaaaa cttaggaaag caattgatga atatggtatt 6180 gatttgccta tggttacttt tctgaaagat gaacttagaa agaaggaaaa aataaaagat 6240 ggaaagacta gagtcataga agctaatagt gtgaatgata ctgtgttatt cagaagtgta 6300 tttggaaatc ttttctctgc tttccacaaa aacccaggta tagtcactgg ttcagcagta 6360 gggtgtgacc ctgaagtatt ctggtcaact atacctctca tgctagatgg agaatgttta 6420 atggcttttg attattcaaa ctatgatggt agcctacatc ccgtttggtt taaatgtctt 6480 agtatgctct tagaagacat aggtttctcc tctcaactta ttaaccagat ctgtaactct 6540 aaacatatat acaaatctaa gtattatgaa gtggaaggag gtatgccatc tggatgtgct 6600 ggtactagta tttttaatac aataatcaac aatattatca ttagaacttt ggtactagat 6660 gcttataaga acatagatct agataaactg aaaatcttag catatgggga tgatgtcatc 6720 ttttcttata attttaaact tgacatggca gttcttgcca aagaaggaga aaaatatgga 6780 ctaacaatca cccctgctga taagtctgat gttttccaag aattgaccta taaaaatgta 6840 acttttctta aaagaggatt cagagctgat gagcgccact ctttccttat acaccctacc 6900 tttcctgtgg ctgagattca tgactccatc agatggacca aaaacccttc atgtatgcag 6960 gaacacgtgc tatctttgtg tcatttaatg tggcataatg gtagacatgc ataccaggaa 7020 ttcattaaag gtatacgcag tgtatctgcc ggtcgggcac tgtatatacc agcttatgaa 7080 gttcttgaac atgaatggta tgaaaaattt tagatataaa actgttaaat atagctagtt 7140 tattagtttt at 7152 //